RNA–Protein interactions for RNA: ENST00000412052.4

ATRIP-204, Transcript of ATR interacting protein, humanhuman

TSL 1 (best) BASIC

Gene ATRIP, Length 2,721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-204ENST00000412052 BABAM1Q9NWV8 329 aa17.14■□□□□ 0.33
ATRIP-204ENST00000412052 USP25Q9UHP3 1055 aa17.14■□□□□ 0.33
ATRIP-204ENST00000412052 ANKARQ7Z5J8 1434 aa17.14■□□□□ 0.33
ATRIP-204ENST00000412052 STX6O43752 255 aa17.14■□□□□ 0.33
ATRIP-204ENST00000412052 ZNF500O60304 480 aaPredicted RBP17.14■□□□□ 0.33
ATRIP-204ENST00000412052 TPM2P07951 284 aa17.14■□□□□ 0.33
ATRIP-204ENST00000412052 AIMP1Q12904 312 aaKnown RBP17.14■□□□□ 0.33
ATRIP-204ENST00000412052 HS1BP3Q53T59 392 aa17.14■□□□□ 0.33
ATRIP-204ENST00000412052 FAM227BQ96M60 508 aa17.14■□□□□ 0.33
ATRIP-204ENST00000412052 TLR7Q9NYK1 1049 aaKnown RBP17.14■□□□□ 0.33
ATRIP-204ENST00000412052 C9orf78Q9NZ63 289 aaPredicted RBP17.14■□□□□ 0.33
ATRIP-204ENST00000412052 LIMCH1Q9UPQ0 1083 aa17.14■□□□□ 0.33
ATRIP-204ENST00000412052 RRP9O43818 475 aaKnown RBP17.13■□□□□ 0.33
ATRIP-204ENST00000412052 HCLS1P14317 486 aaPredicted RBP17.13■□□□□ 0.33
ATRIP-204ENST00000412052 ESCO1Q5FWF5 840 aa17.13■□□□□ 0.33
ATRIP-204ENST00000412052 KLHDC4Q8TBB5 520 aa17.13■□□□□ 0.33
ATRIP-204ENST00000412052 TAF6LQ9Y6J9 622 aa17.13■□□□□ 0.33
ATRIP-204ENST00000412052 PTMAP06454 111 aaKnown RBP17.13■□□□□ 0.33
ATRIP-204ENST00000412052 HYPKQ9NX55 129 aa17.13■□□□□ 0.33
ATRIP-204ENST00000412052 AACSQ86V21 672 aa17.12■□□□□ 0.33
ATRIP-204ENST00000412052 CCDC8Q9H0W5 538 aaPredicted RBP17.12■□□□□ 0.33
ATRIP-204ENST00000412052 SIL1Q9H173 461 aa17.12■□□□□ 0.33
ATRIP-204ENST00000412052 SMC3Q9UQE7 1217 aa17.12■□□□□ 0.33
ATRIP-204ENST00000412052 MED1Q15648 1581 aaPredicted RBP17.12■□□□□ 0.33
ATRIP-204ENST00000412052 GJB2P29033 226 aa17.12■□□□□ 0.33
ATRIP-204ENST00000412052 DNM1Q05193 864 aaKnown RBP17.12■□□□□ 0.33
ATRIP-204ENST00000412052 LMOD2Q6P5Q4 547 aa17.12■□□□□ 0.33
ATRIP-204ENST00000412052 CLASRPQ8N2M8 674 aaKnown RBP17.12■□□□□ 0.33
ATRIP-204ENST00000412052 C17orf53Q8N3J3 647 aaPredicted RBP17.12■□□□□ 0.33
ATRIP-204ENST00000412052 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.12■□□□□ 0.33
ATRIP-204ENST00000412052 GLRX3O76003 335 aaKnown RBP17.12■□□□□ 0.33
ATRIP-204ENST00000412052 F13A1P00488 732 aa17.12■□□□□ 0.33
ATRIP-204ENST00000412052 KAZALD1Q96I82 304 aa17.12■□□□□ 0.33
ATRIP-204ENST00000412052 KDM3BQ7LBC6 1761 aa17.11■□□□□ 0.33
ATRIP-204ENST00000412052 SYAP1Q96A49 352 aaPredicted RBP17.11■□□□□ 0.33
ATRIP-204ENST00000412052 SUCLG2Q96I99 432 aa17.11■□□□□ 0.33
ATRIP-204ENST00000412052 NFAT5O94916 1531 aa17.11■□□□□ 0.33
ATRIP-204ENST00000412052 PSME1Q06323 249 aa17.11■□□□□ 0.33
ATRIP-204ENST00000412052 FAM173BQ6P4H8 233 aa17.11■□□□□ 0.33
ATRIP-204ENST00000412052 GIMAP6Q6P9H5 292 aa17.11■□□□□ 0.33
ATRIP-204ENST00000412052 JARID2Q92833 1246 aaPredicted RBP17.11■□□□□ 0.33
ATRIP-204ENST00000412052 ECHDC1Q9NTX5 307 aa17.11■□□□□ 0.33
ATRIP-204ENST00000412052 CCDC39Q9UFE4 941 aa17.11■□□□□ 0.33
ATRIP-204ENST00000412052 RNMTO43148 476 aaKnown RBP17.1■□□□□ 0.33
ATRIP-204ENST00000412052 IFIT2P09913 472 aaKnown RBP17.1■□□□□ 0.33
ATRIP-204ENST00000412052 PDRG1Q9NUG6 133 aa17.1■□□□□ 0.33
ATRIP-204ENST00000412052 VPS37CA5D8V6 355 aaPredicted RBP17.1■□□□□ 0.33
ATRIP-204ENST00000412052 GIGYF1O75420 1035 aaPredicted RBP17.1■□□□□ 0.33
ATRIP-204ENST00000412052 ME3Q16798 604 aa17.1■□□□□ 0.33
ATRIP-204ENST00000412052 EAF2Q96CJ1 260 aaPredicted RBP17.1■□□□□ 0.33
ATRIP-204ENST00000412052 EDC3Q96F86 508 aaKnown RBP17.1■□□□□ 0.33
ATRIP-204ENST00000412052 ARID3AQ99856 593 aa17.1■□□□□ 0.33
ATRIP-204ENST00000412052 DBF4Q9UBU7 674 aaPredicted RBP17.1■□□□□ 0.33
ATRIP-204ENST00000412052 CHMP3Q9Y3E7 222 aa17.1■□□□□ 0.33
ATRIP-204ENST00000412052 SASH1O94885 1247 aa17.09■□□□□ 0.33
ATRIP-204ENST00000412052 AKAP4Q5JQC9 854 aa17.09■□□□□ 0.33
ATRIP-204ENST00000412052 FERMT3Q86UX7 667 aa17.09■□□□□ 0.33
ATRIP-204ENST00000412052 BICC1Q9H694 974 aaKnown RBP17.09■□□□□ 0.33
ATRIP-204ENST00000412052 MTMR6Q9Y217 621 aa17.09■□□□□ 0.33
ATRIP-204ENST00000412052 CRYBG1Q9Y4K1 1723 aa17.09■□□□□ 0.33
ATRIP-204ENST00000412052 PIP4K2AP48426 406 aaPredicted RBP17.09■□□□□ 0.33
ATRIP-204ENST00000412052 CCDC183Q5T5S1 534 aa17.09■□□□□ 0.33
ATRIP-204ENST00000412052 USP42Q9H9J4 1324 aaKnown RBP17.09■□□□□ 0.33
ATRIP-204ENST00000412052 UQCRHLA0A096LP55 91 aa17.08■□□□□ 0.33
ATRIP-204ENST00000412052 CHGBP05060 677 aa17.08■□□□□ 0.33
ATRIP-204ENST00000412052 UQCRHP07919 91 aa17.08■□□□□ 0.33
ATRIP-204ENST00000412052 PLCB2Q00722 1185 aa17.08■□□□□ 0.33
ATRIP-204ENST00000412052 NMIQ13287 307 aaPredicted RBP17.08■□□□□ 0.33
ATRIP-204ENST00000412052 SLC39A6Q13433 755 aa17.08■□□□□ 0.33
ATRIP-204ENST00000412052 TMEM87AQ8NBN3 555 aa17.08■□□□□ 0.33
ATRIP-204ENST00000412052 ORAI2Q96SN7 254 aa17.08■□□□□ 0.33
ATRIP-204ENST00000412052 TTC12Q9H892 705 aaPredicted RBP17.08■□□□□ 0.33
ATRIP-204ENST00000412052 FAM13BQ9NYF5 915 aa17.08■□□□□ 0.33
ATRIP-204ENST00000412052 NDUFB9Q9Y6M9 179 aa17.08■□□□□ 0.33
ATRIP-204ENST00000412052 TTC41PQ6P2S7 1318 aa17.08■□□□□ 0.33
ATRIP-204ENST00000412052 BOLA2Q9H3K6 86 aa17.08■□□□□ 0.32
ATRIP-204ENST00000412052 TPCN1Q9ULQ1 816 aa17.08■□□□□ 0.32
ATRIP-204ENST00000412052 AXIN2Q9Y2T1 843 aa17.08■□□□□ 0.32
ATRIP-204ENST00000412052 RBM8AQ9Y5S9 174 aaKnown RBP17.08■□□□□ 0.32
ATRIP-204ENST00000412052 A0A0D9SFI3 127 aa17.07■□□□□ 0.32
ATRIP-204ENST00000412052 HOXB7P09629 217 aa17.07■□□□□ 0.32
ATRIP-204ENST00000412052 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.07■□□□□ 0.32
ATRIP-204ENST00000412052 MTX1Q13505 466 aa17.07■□□□□ 0.32
ATRIP-204ENST00000412052 HSP90AB4PQ58FF6 505 aa17.07■□□□□ 0.32
ATRIP-204ENST00000412052 KSR2Q6VAB6 950 aa17.07■□□□□ 0.32
ATRIP-204ENST00000412052 CCDC171Q6TFL3 1326 aa17.07■□□□□ 0.32
ATRIP-204ENST00000412052 AP5Z1O43299 807 aa17.06■□□□□ 0.32
ATRIP-204ENST00000412052 ADCY5O95622 1261 aa17.06■□□□□ 0.32
ATRIP-204ENST00000412052 KCNJ4P48050 445 aa17.06■□□□□ 0.32
ATRIP-204ENST00000412052 PLEKHO1Q53GL0 409 aaPredicted RBP17.06■□□□□ 0.32
ATRIP-204ENST00000412052 C1orf141Q5JVX7 400 aa17.06■□□□□ 0.32
ATRIP-204ENST00000412052 VSIG10Q8N0Z9 540 aa17.06■□□□□ 0.32
ATRIP-204ENST00000412052 EPB41L2O43491 1005 aaKnown RBP17.06■□□□□ 0.32
ATRIP-204ENST00000412052 UBE2HP62256 183 aa17.06■□□□□ 0.32
ATRIP-204ENST00000412052 NECTIN1Q15223 517 aa17.06■□□□□ 0.32
ATRIP-204ENST00000412052 CREB3L3Q68CJ9 461 aa17.06■□□□□ 0.32
ATRIP-204ENST00000412052 ZSWIM6Q9HCJ5 1215 aa17.06■□□□□ 0.32
ATRIP-204ENST00000412052 USP54Q70EL1 1684 aa17.06■□□□□ 0.32
ATRIP-204ENST00000412052 PHF14O94880 888 aa17.05■□□□□ 0.32
ATRIP-204ENST00000412052 MYL6BP14649 208 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms