RNA–Protein interactions for RNA: ENST00000411840.6

MRPL48-204, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 1 (best) BASIC

Gene MRPL48, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-204ENST00000411840 PCNTO95613 3336 aa12.18□□□□□ -0.46
MRPL48-204ENST00000411840 UBR2Q8IWV8 1755 aa12.18□□□□□ -0.46
MRPL48-204ENST00000411840 PRAMEF22A3QJZ6 481 aa12.17□□□□□ -0.46
MRPL48-204ENST00000411840 U2AF1L5P0DN76 240 aaPredicted RBP12.17□□□□□ -0.46
MRPL48-204ENST00000411840 SRGNP10124 158 aa12.17□□□□□ -0.46
MRPL48-204ENST00000411840 PIP4K2AP48426 406 aaPredicted RBP12.17□□□□□ -0.46
MRPL48-204ENST00000411840 ST5P78524 1137 aa12.17□□□□□ -0.46
MRPL48-204ENST00000411840 U2AF1Q01081 240 aaKnown RBP eCLIP12.17□□□□□ -0.46
MRPL48-204ENST00000411840 STYK1Q6J9G0 422 aa12.17□□□□□ -0.46
MRPL48-204ENST00000411840 MCM10Q7L590 875 aa12.17□□□□□ -0.46
MRPL48-204ENST00000411840 RTF1Q92541 710 aaKnown RBP12.17□□□□□ -0.46
MRPL48-204ENST00000411840 CNKSR1Q969H4 720 aa12.17□□□□□ -0.46
MRPL48-204ENST00000411840 SNRPA1P09661 255 aaKnown RBP12.16□□□□□ -0.46
MRPL48-204ENST00000411840 PPP2R1AP30153 589 aa12.16□□□□□ -0.46
MRPL48-204ENST00000411840 PRPF40BQ6NWY9 871 aaKnown RBP12.16□□□□□ -0.46
MRPL48-204ENST00000411840 CLEC4GQ6UXB4 293 aa12.16□□□□□ -0.46
MRPL48-204ENST00000411840 AFDNP55196 1824 aaKnown RBP12.16□□□□□ -0.46
MRPL48-204ENST00000411840 WDR90Q96KV7 1748 aa12.15□□□□□ -0.46
MRPL48-204ENST00000411840 DCTN1Q14203 1278 aa12.15□□□□□ -0.46
MRPL48-204ENST00000411840 COL13A1Q5TAT6 717 aaPredicted RBP12.15□□□□□ -0.46
MRPL48-204ENST00000411840 NBPF5PQ86XG9 351 aaPredicted RBP12.15□□□□□ -0.46
MRPL48-204ENST00000411840 MASTLQ96GX5 879 aa12.15□□□□□ -0.46
MRPL48-204ENST00000411840 TAOK3Q9H2K8 898 aa12.15□□□□□ -0.46
MRPL48-204ENST00000411840 TNRC6CQ9HCJ0 1690 aaKnown RBP12.15□□□□□ -0.46
MRPL48-204ENST00000411840 LTBP3Q9NS15 1303 aa12.14□□□□□ -0.47
MRPL48-204ENST00000411840 NBPF26B4DH59 902 aa12.14□□□□□ -0.47
MRPL48-204ENST00000411840 HTATSF1O43719 755 aaKnown RBP12.14□□□□□ -0.47
MRPL48-204ENST00000411840 SOGA3Q5TF21 947 aa12.14□□□□□ -0.47
MRPL48-204ENST00000411840 NBPF10Q6P3W6 841 aaKnown RBP12.14□□□□□ -0.47
MRPL48-204ENST00000411840 NBPF15Q8N660 670 aa12.14□□□□□ -0.47
MRPL48-204ENST00000411840 ZNF652Q9Y2D9 606 aa12.14□□□□□ -0.47
MRPL48-204ENST00000411840 DDNO94850 711 aaPredicted RBP12.13□□□□□ -0.47
MRPL48-204ENST00000411840 TPTE2Q6XPS3 522 aa12.13□□□□□ -0.47
MRPL48-204ENST00000411840 C7orf43Q8WVR3 580 aa12.13□□□□□ -0.47
MRPL48-204ENST00000411840 SPINK5Q9NQ38 1064 aaPredicted RBP12.13□□□□□ -0.47
MRPL48-204ENST00000411840 DLEC1Q9Y238 1755 aa12.13□□□□□ -0.47
MRPL48-204ENST00000411840 KLRG2A4D1S0 409 aaPredicted RBP12.12□□□□□ -0.47
MRPL48-204ENST00000411840 NPR1P16066 1061 aa12.12□□□□□ -0.47
MRPL48-204ENST00000411840 TAF7Q15545 349 aaPredicted RBP12.12□□□□□ -0.47
MRPL48-204ENST00000411840 CHADLQ6NUI6 762 aa12.12□□□□□ -0.47
MRPL48-204ENST00000411840 MIS18AQ9NYP9 233 aa12.12□□□□□ -0.47
MRPL48-204ENST00000411840 NIP7Q9Y221 180 aaKnown RBP eCLIP12.12□□□□□ -0.47
MRPL48-204ENST00000411840 SCN7AQ01118 1682 aa12.12□□□□□ -0.47
MRPL48-204ENST00000411840 SBF1O95248 1867 aa12.12□□□□□ -0.47
MRPL48-204ENST00000411840 SIPA1L3O60292 1781 aaPredicted RBP12.11□□□□□ -0.47
MRPL48-204ENST00000411840 FAM177BA6PVY3 158 aa12.11□□□□□ -0.47
MRPL48-204ENST00000411840 RGL2O15211 777 aa12.11□□□□□ -0.47
MRPL48-204ENST00000411840 POTEIP0CG38 1075 aa12.1□□□□□ -0.47
MRPL48-204ENST00000411840 POTEJP0CG39 1038 aa12.1□□□□□ -0.47
MRPL48-204ENST00000411840 HLFQ16534 295 aa12.1□□□□□ -0.47
MRPL48-204ENST00000411840 CCDC93Q567U6 631 aa12.1□□□□□ -0.47
MRPL48-204ENST00000411840 ANKRD31Q8N7Z5 1873 aa12.1□□□□□ -0.47
MRPL48-204ENST00000411840 GTF2E1P29083 439 aaPredicted RBP12.09□□□□□ -0.47
MRPL48-204ENST00000411840 FKBP4Q02790 459 aaKnown RBP eCLIP12.09□□□□□ -0.47
MRPL48-204ENST00000411840 OLFM4Q6UX06 510 aa12.09□□□□□ -0.47
MRPL48-204ENST00000411840 ZNF277Q9NRM2 450 aaPredicted RBP12.09□□□□□ -0.47
MRPL48-204ENST00000411840 TIAM2Q8IVF5 1701 aa12.08□□□□□ -0.47
MRPL48-204ENST00000411840 IQCA1LA6NCM1 817 aa12.08□□□□□ -0.48
MRPL48-204ENST00000411840 HSPA1AP0DMV8 641 aaKnown RBP12.08□□□□□ -0.48
MRPL48-204ENST00000411840 HSPA1BP0DMV9 641 aaKnown RBP12.08□□□□□ -0.48
MRPL48-204ENST00000411840 ALDH1B1P30837 517 aa12.08□□□□□ -0.48
MRPL48-204ENST00000411840 RTKN2Q8IZC4 609 aa12.08□□□□□ -0.48
MRPL48-204ENST00000411840 TNS4Q8IZW8 715 aa12.08□□□□□ -0.48
MRPL48-204ENST00000411840 NGEFQ8N5V2 710 aa12.08□□□□□ -0.48
MRPL48-204ENST00000411840 PNISRQ8TF01 805 aaKnown RBP12.08□□□□□ -0.48
MRPL48-204ENST00000411840 L3MBTL3Q96JM7 780 aaPredicted RBP12.08□□□□□ -0.48
MRPL48-204ENST00000411840 TAF1DQ9H5J8 278 aaPredicted RBP12.08□□□□□ -0.48
MRPL48-204ENST00000411840 CREBZFQ9NS37 354 aa12.08□□□□□ -0.48
MRPL48-204ENST00000411840 VIRMAQ69YN4 1812 aaKnown RBP12.08□□□□□ -0.48
MRPL48-204ENST00000411840 COL11A2P13942 1736 aaPredicted RBP12.08□□□□□ -0.48
MRPL48-204ENST00000411840 NEFMP07197 916 aa12.07□□□□□ -0.48
MRPL48-204ENST00000411840 C1QBPQ07021 282 aaKnown RBP12.07□□□□□ -0.48
MRPL48-204ENST00000411840 MKRN1Q9UHC7 482 aaKnown RBP12.07□□□□□ -0.48
MRPL48-204ENST00000411840 RRP7AQ9Y3A4 280 aaKnown RBP12.07□□□□□ -0.48
MRPL48-204ENST00000411840 ERVV-1B6SEH8 477 aa12.06□□□□□ -0.48
MRPL48-204ENST00000411840 CAPN15O75808 1086 aa12.06□□□□□ -0.48
MRPL48-204ENST00000411840 LDHDQ86WU2 507 aa12.06□□□□□ -0.48
MRPL48-204ENST00000411840 SYNE4Q8N205 404 aa12.06□□□□□ -0.48
MRPL48-204ENST00000411840 PLEKHF1Q96S99 279 aa12.06□□□□□ -0.48
MRPL48-204ENST00000411840 NYXQ9GZU5 481 aa12.06□□□□□ -0.48
MRPL48-204ENST00000411840 ZNF541Q9H0D2 1346 aa12.06□□□□□ -0.48
MRPL48-204ENST00000411840 EIF4A1P60842 406 aaKnown RBP12.05□□□□□ -0.48
MRPL48-204ENST00000411840 CRY2Q49AN0 593 aa12.05□□□□□ -0.48
MRPL48-204ENST00000411840 TTLL7Q6ZT98 887 aa12.05□□□□□ -0.48
MRPL48-204ENST00000411840 NUTM1Q86Y26 1132 aa12.05□□□□□ -0.48
MRPL48-204ENST00000411840 PASKQ96RG2 1323 aa12.05□□□□□ -0.48
MRPL48-204ENST00000411840 SLX4Q8IY92 1834 aa12.04□□□□□ -0.48
MRPL48-204ENST00000411840 FER1L6Q2WGJ9 1857 aa12.04□□□□□ -0.48
MRPL48-204ENST00000411840 FZD9O00144 591 aa12.04□□□□□ -0.48
MRPL48-204ENST00000411840 ITGBL1O95965 494 aaPredicted RBP12.04□□□□□ -0.48
MRPL48-204ENST00000411840 MYL6BP14649 208 aa12.04□□□□□ -0.48
MRPL48-204ENST00000411840 IARSP41252 1262 aaKnown RBP12.04□□□□□ -0.48
MRPL48-204ENST00000411840 NFE2L2Q16236 605 aa12.04□□□□□ -0.48
MRPL48-204ENST00000411840 EAPPQ56P03 285 aaPredicted RBP12.04□□□□□ -0.48
MRPL48-204ENST00000411840 KIF6Q6ZMV9 814 aa12.04□□□□□ -0.48
MRPL48-204ENST00000411840 THUMPD2Q9BTF0 503 aaKnown RBP12.04□□□□□ -0.48
MRPL48-204ENST00000411840 HACL1Q9UJ83 578 aa12.04□□□□□ -0.48
MRPL48-204ENST00000411840 CLEC11AQ9Y240 323 aa12.04□□□□□ -0.48
MRPL48-204ENST00000411840 BCORQ6W2J9 1755 aa12.04□□□□□ -0.48
MRPL48-204ENST00000411840 MAP3K15Q6ZN16 1313 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms