RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 HCLS1P14317 486 aaPredicted RBP5.25□□□□□ -1.57
PTPN13-202ENST00000411767 IKQ13123 557 aaPredicted RBP5.25□□□□□ -1.57
PTPN13-202ENST00000411767 SPA17Q15506 151 aa5.25□□□□□ -1.57
PTPN13-202ENST00000411767 SPATS2Q86XZ4 545 aaKnown RBP5.25□□□□□ -1.57
PTPN13-202ENST00000411767 SAFB2Q14151 953 aaKnown RBP eCLIP5.25□□□□□ -1.57
PTPN13-202ENST00000411767 RUFY4Q6ZNE9 571 aa5.25□□□□□ -1.57
PTPN13-202ENST00000411767 VPS52Q8N1B4 723 aa5.25□□□□□ -1.57
PTPN13-202ENST00000411767 ARFGAP2Q8N6H7 521 aa5.25□□□□□ -1.57
PTPN13-202ENST00000411767 SDF4Q9BRK5 362 aa5.25□□□□□ -1.57
PTPN13-202ENST00000411767 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.25□□□□□ -1.57
PTPN13-202ENST00000411767 FAN1Q9Y2M0 1017 aa5.25□□□□□ -1.57
PTPN13-202ENST00000411767 FGFR1OPO95684 399 aaKnown RBP5.25□□□□□ -1.57
PTPN13-202ENST00000411767 CASTP20810 708 aaKnown RBP5.25□□□□□ -1.57
PTPN13-202ENST00000411767 NLRP5P59047 1200 aa5.25□□□□□ -1.57
PTPN13-202ENST00000411767 PLCB4Q15147 1175 aa5.25□□□□□ -1.57
PTPN13-202ENST00000411767 PLCB1Q9NQ66 1216 aa5.25□□□□□ -1.57
PTPN13-202ENST00000411767 RASAL2Q9UJF2 1139 aa5.25□□□□□ -1.57
PTPN13-202ENST00000411767 CEP104O60308 925 aa5.25□□□□□ -1.57
PTPN13-202ENST00000411767 SKIP12755 728 aa5.25□□□□□ -1.57
PTPN13-202ENST00000411767 CCDC57Q2TAC2 916 aa5.25□□□□□ -1.57
PTPN13-202ENST00000411767 CCDC102BQ68D86 513 aa5.25□□□□□ -1.57
PTPN13-202ENST00000411767 CCDC117Q8IWD4 279 aaPredicted RBP5.25□□□□□ -1.57
PTPN13-202ENST00000411767 BAG1Q99933 345 aaPredicted RBP5.25□□□□□ -1.57
PTPN13-202ENST00000411767 Q9H521 79 aa5.25□□□□□ -1.57
PTPN13-202ENST00000411767 CTTNBP2NLQ9P2B4 639 aa5.25□□□□□ -1.57
PTPN13-202ENST00000411767 WWC3Q9ULE0 1092 aa5.25□□□□□ -1.57
PTPN13-202ENST00000411767 FAF1Q9UNN5 650 aaPredicted RBP5.25□□□□□ -1.57
PTPN13-202ENST00000411767 PAFAH1B1P43034 410 aa5.25□□□□□ -1.57
PTPN13-202ENST00000411767 NECAB1Q8N987 351 aa5.25□□□□□ -1.57
PTPN13-202ENST00000411767 EIF5P55010 431 aaKnown RBP5.24□□□□□ -1.57
PTPN13-202ENST00000411767 ESRRGP62508 458 aa5.24□□□□□ -1.57
PTPN13-202ENST00000411767 HDXQ7Z353 690 aa5.24□□□□□ -1.57
PTPN13-202ENST00000411767 UTP14AQ9BVJ6 771 aaKnown RBP5.24□□□□□ -1.57
PTPN13-202ENST00000411767 FBLN2P98095 1184 aa5.24□□□□□ -1.57
PTPN13-202ENST00000411767 CTAGE3PQ8IX95 158 aa5.24□□□□□ -1.57
PTPN13-202ENST00000411767 ENAHQ8N8S7 591 aaPredicted RBP5.24□□□□□ -1.57
PTPN13-202ENST00000411767 CXorf38Q8TB03 319 aa5.24□□□□□ -1.57
PTPN13-202ENST00000411767 STAC3Q96MF2 364 aa5.24□□□□□ -1.57
PTPN13-202ENST00000411767 UBAC1Q9BSL1 405 aa5.24□□□□□ -1.57
PTPN13-202ENST00000411767 TRIM7Q9C029 511 aa5.24□□□□□ -1.57
PTPN13-202ENST00000411767 PPP1R9AQ9ULJ8 1098 aa5.24□□□□□ -1.57
PTPN13-202ENST00000411767 GOLGA8QA0A0J9YX86 632 aa5.24□□□□□ -1.57
PTPN13-202ENST00000411767 GOLGA8OA6NCC3 632 aa5.24□□□□□ -1.57
PTPN13-202ENST00000411767 GOLGA8NF8WBI6 632 aa5.24□□□□□ -1.57
PTPN13-202ENST00000411767 H0YC42 278 aa5.24□□□□□ -1.57
PTPN13-202ENST00000411767 CCDC192P0DO97 292 aa5.24□□□□□ -1.57
PTPN13-202ENST00000411767 IBSPP21815 317 aaPredicted RBP5.24□□□□□ -1.57
PTPN13-202ENST00000411767 SLC8A1P32418 973 aa5.24□□□□□ -1.57
PTPN13-202ENST00000411767 SKOR1P84550 965 aa5.24□□□□□ -1.57
PTPN13-202ENST00000411767 IFI16Q16666 785 aaKnown RBP5.24□□□□□ -1.57
PTPN13-202ENST00000411767 ATF7IPQ6VMQ6 1270 aa5.24□□□□□ -1.57
PTPN13-202ENST00000411767 MORC4Q8TE76 937 aa5.24□□□□□ -1.57
PTPN13-202ENST00000411767 SERPINC1P01008 464 aa5.24□□□□□ -1.57
PTPN13-202ENST00000411767 SCHIP1Q9P0W5 487 aaPredicted RBP5.24□□□□□ -1.57
PTPN13-202ENST00000411767 FBXO2Q9UK22 296 aaPredicted RBP5.24□□□□□ -1.57
PTPN13-202ENST00000411767 APBB1O00213 710 aa5.24□□□□□ -1.57
PTPN13-202ENST00000411767 ZSCAN12O43309 604 aa5.24□□□□□ -1.57
PTPN13-202ENST00000411767 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.24□□□□□ -1.57
PTPN13-202ENST00000411767 KCNA4P22459 653 aa5.24□□□□□ -1.57
PTPN13-202ENST00000411767 ATICP31939 592 aa5.24□□□□□ -1.57
PTPN13-202ENST00000411767 STX17P56962 302 aa5.24□□□□□ -1.57
PTPN13-202ENST00000411767 AP1ARQ63HQ0 302 aa5.24□□□□□ -1.57
PTPN13-202ENST00000411767 FSD1Q9BTV5 496 aa5.24□□□□□ -1.57
PTPN13-202ENST00000411767 ZNF652Q9Y2D9 606 aa5.24□□□□□ -1.57
PTPN13-202ENST00000411767 BIRC5O15392 142 aa5.23□□□□□ -1.57
PTPN13-202ENST00000411767 KRT3P12035 628 aa5.23□□□□□ -1.57
PTPN13-202ENST00000411767 VPS41P49754 854 aa5.23□□□□□ -1.57
PTPN13-202ENST00000411767 GJC2Q5T442 439 aaPredicted RBP5.23□□□□□ -1.57
PTPN13-202ENST00000411767 ANKRD45Q5TZF3 282 aa5.23□□□□□ -1.57
PTPN13-202ENST00000411767 NOL8Q76FK4 1167 aaKnown RBP5.23□□□□□ -1.57
PTPN13-202ENST00000411767 CTNNBL1Q8WYA6 563 aaPredicted RBP5.23□□□□□ -1.57
PTPN13-202ENST00000411767 STMN3Q9NZ72 180 aa5.23□□□□□ -1.57
PTPN13-202ENST00000411767 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.23□□□□□ -1.57
PTPN13-202ENST00000411767 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.23□□□□□ -1.57
PTPN13-202ENST00000411767 CD2APQ9Y5K6 639 aa5.23□□□□□ -1.57
PTPN13-202ENST00000411767 GOLGA8RI6L899 631 aa5.23□□□□□ -1.57
PTPN13-202ENST00000411767 CSB-PGBD3P0DP91 1061 aa5.23□□□□□ -1.57
PTPN13-202ENST00000411767 BIRC2Q13490 618 aa5.23□□□□□ -1.57
PTPN13-202ENST00000411767 SRGAP1Q7Z6B7 1085 aa5.23□□□□□ -1.57
PTPN13-202ENST00000411767 NBPF11Q86T75 865 aa5.23□□□□□ -1.57
PTPN13-202ENST00000411767 LZICQ8WZA0 190 aa5.23□□□□□ -1.57
PTPN13-202ENST00000411767 SYTL4Q96C24 671 aaPredicted RBP5.23□□□□□ -1.57
PTPN13-202ENST00000411767 PHEXP78562 749 aa5.23□□□□□ -1.57
PTPN13-202ENST00000411767 NEDD9Q14511 834 aa5.23□□□□□ -1.57
PTPN13-202ENST00000411767 CCDC121Q6ZUS5 278 aa5.23□□□□□ -1.57
PTPN13-202ENST00000411767 OTUD6BQ8N6M0 293 aa5.23□□□□□ -1.57
PTPN13-202ENST00000411767 JAKMIP2Q96AA8 810 aa5.23□□□□□ -1.57
PTPN13-202ENST00000411767 ATP6V0A4Q9HBG4 840 aa5.23□□□□□ -1.57
PTPN13-202ENST00000411767 ANO2Q9NQ90 1003 aa5.23□□□□□ -1.57
PTPN13-202ENST00000411767 ARHGAP29Q52LW3 1261 aa5.23□□□□□ -1.57
PTPN13-202ENST00000411767 MAATS1Q7Z4T9 603 aa5.23□□□□□ -1.57
PTPN13-202ENST00000411767 CCDC94Q9BW85 323 aaPredicted RBP5.23□□□□□ -1.57
PTPN13-202ENST00000411767 DRC3Q9H069 523 aa5.23□□□□□ -1.57
PTPN13-202ENST00000411767 CARSP49589 748 aaKnown RBP5.23□□□□□ -1.57
PTPN13-202ENST00000411767 PIP4K2CQ8TBX8 421 aa5.23□□□□□ -1.57
PTPN13-202ENST00000411767 HYPKQ9NX55 129 aa5.23□□□□□ -1.57
PTPN13-202ENST00000411767 PSMA5P28066 241 aa5.23□□□□□ -1.57
PTPN13-202ENST00000411767 GRIN1Q05586 938 aa5.23□□□□□ -1.57
PTPN13-202ENST00000411767 CETN1Q12798 172 aa5.23□□□□□ -1.57
PTPN13-202ENST00000411767 STX1AQ16623 288 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms