RNA–Protein interactions for RNA: ENST00000411066.1

RN7SKP259-201, Transcript of RNA, 7SK small nuclear pseudogene 259, humanhuman

BASIC

Gene RN7SKP259, Length 333 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP259-201ENST00000411066 MYD88Q99836 296 aa13.2□□□□□ -0.3
RN7SKP259-201ENST00000411066 TMOD3Q9NYL9 352 aa13.2□□□□□ -0.3
RN7SKP259-201ENST00000411066 AFDNP55196 1824 aaKnown RBP13.2□□□□□ -0.3
RN7SKP259-201ENST00000411066 ITGB4P16144 1822 aa13.18□□□□□ -0.3
RN7SKP259-201ENST00000411066 NBPF26B4DH59 902 aa13.18□□□□□ -0.3
RN7SKP259-201ENST00000411066 ERC2O15083 957 aa13.18□□□□□ -0.3
RN7SKP259-201ENST00000411066 NBPF14Q5TI25 921 aa13.18□□□□□ -0.3
RN7SKP259-201ENST00000411066 NBPF10Q6P3W6 841 aaKnown RBP13.18□□□□□ -0.3
RN7SKP259-201ENST00000411066 HSCBQ8IWL3 235 aa13.18□□□□□ -0.3
RN7SKP259-201ENST00000411066 NBPF15Q8N660 670 aa13.18□□□□□ -0.3
RN7SKP259-201ENST00000411066 KAZALD1Q96I82 304 aa13.18□□□□□ -0.3
RN7SKP259-201ENST00000411066 USP26Q9BXU7 913 aa13.18□□□□□ -0.3
RN7SKP259-201ENST00000411066 THRAP3Q9Y2W1 955 aaKnown RBP13.18□□□□□ -0.3
RN7SKP259-201ENST00000411066 NUP188Q5SRE5 1749 aa13.18□□□□□ -0.3
RN7SKP259-201ENST00000411066 NRAPQ86VF7 1730 aa13.18□□□□□ -0.3
RN7SKP259-201ENST00000411066 TTC41PQ6P2S7 1318 aa13.17□□□□□ -0.3
RN7SKP259-201ENST00000411066 EXOC5O00471 708 aa13.17□□□□□ -0.3
RN7SKP259-201ENST00000411066 EPB41L2O43491 1005 aaKnown RBP13.17□□□□□ -0.3
RN7SKP259-201ENST00000411066 TOM1O60784 492 aa13.17□□□□□ -0.3
RN7SKP259-201ENST00000411066 OS9Q13438 667 aaPredicted RBP13.17□□□□□ -0.3
RN7SKP259-201ENST00000411066 RTL5Q5HYW3 569 aaPredicted RBP13.17□□□□□ -0.3
RN7SKP259-201ENST00000411066 CLASRPQ8N2M8 674 aaKnown RBP13.17□□□□□ -0.3
RN7SKP259-201ENST00000411066 KIF2CQ99661 725 aa13.17□□□□□ -0.3
RN7SKP259-201ENST00000411066 BICC1Q9H694 974 aaKnown RBP13.17□□□□□ -0.3
RN7SKP259-201ENST00000411066 IL1RAPL2Q9NP60 686 aa13.17□□□□□ -0.3
RN7SKP259-201ENST00000411066 NWD2Q9ULI1 1742 aa13.16□□□□□ -0.3
RN7SKP259-201ENST00000411066 G3BP1Q13283 466 aaKnown RBP eCLIP13.16□□□□□ -0.3
RN7SKP259-201ENST00000411066 BCL11AQ9H165 835 aa13.16□□□□□ -0.3
RN7SKP259-201ENST00000411066 PTCD1O75127 700 aaKnown RBP13.15□□□□□ -0.3
RN7SKP259-201ENST00000411066 NBR1Q14596 966 aa13.15□□□□□ -0.3
RN7SKP259-201ENST00000411066 RABEP1Q15276 862 aa13.15□□□□□ -0.3
RN7SKP259-201ENST00000411066 RABL6Q3YEC7 729 aaPredicted RBP13.15□□□□□ -0.3
RN7SKP259-201ENST00000411066 PI4K2BQ8TCG2 481 aa13.15□□□□□ -0.3
RN7SKP259-201ENST00000411066 PIGBQ92521 554 aa13.15□□□□□ -0.3
RN7SKP259-201ENST00000411066 GPATCH3Q96I76 525 aa13.15□□□□□ -0.3
RN7SKP259-201ENST00000411066 AK9Q5TCS8 1911 aa13.15□□□□□ -0.3
RN7SKP259-201ENST00000411066 BCL9O00512 1426 aa13.14□□□□□ -0.31
RN7SKP259-201ENST00000411066 H7C1W4 665 aa13.14□□□□□ -0.31
RN7SKP259-201ENST00000411066 GLRX3O76003 335 aaKnown RBP13.14□□□□□ -0.31
RN7SKP259-201ENST00000411066 A1BGP04217 495 aa13.14□□□□□ -0.31
RN7SKP259-201ENST00000411066 CHMLP26374 656 aa13.14□□□□□ -0.31
RN7SKP259-201ENST00000411066 CASP7P55210 303 aa13.14□□□□□ -0.31
RN7SKP259-201ENST00000411066 NUTM1Q86Y26 1132 aa13.14□□□□□ -0.31
RN7SKP259-201ENST00000411066 IL27Q8NEV9 243 aa13.14□□□□□ -0.31
RN7SKP259-201ENST00000411066 ESYT1Q9BSJ8 1104 aa13.14□□□□□ -0.31
RN7SKP259-201ENST00000411066 ANTXR1Q9H6X2 564 aa13.14□□□□□ -0.31
RN7SKP259-201ENST00000411066 COPRSQ9NQ92 184 aa13.14□□□□□ -0.31
RN7SKP259-201ENST00000411066 ATG3Q9NT62 314 aa13.14□□□□□ -0.31
RN7SKP259-201ENST00000411066 SPATA31A1Q5TZJ5 1347 aa13.13□□□□□ -0.31
RN7SKP259-201ENST00000411066 A0A087WZG4 1122 aa13.13□□□□□ -0.31
RN7SKP259-201ENST00000411066 TRIM6-TRIM34B2RNG4 842 aa13.13□□□□□ -0.31
RN7SKP259-201ENST00000411066 STARD3NLO95772 234 aa13.13□□□□□ -0.31
RN7SKP259-201ENST00000411066 PIP4K2AP48426 406 aaPredicted RBP13.13□□□□□ -0.31
RN7SKP259-201ENST00000411066 CNTROBQ8N137 903 aa13.13□□□□□ -0.31
RN7SKP259-201ENST00000411066 CCDC191Q8NCU4 936 aa13.13□□□□□ -0.31
RN7SKP259-201ENST00000411066 CWC25Q9NXE8 425 aaPredicted RBP13.13□□□□□ -0.31
RN7SKP259-201ENST00000411066 IFIT2P09913 472 aaKnown RBP13.12□□□□□ -0.31
RN7SKP259-201ENST00000411066 TRIM28Q13263 835 aaKnown RBP13.12□□□□□ -0.31
RN7SKP259-201ENST00000411066 NFKBIBQ15653 356 aa13.12□□□□□ -0.31
RN7SKP259-201ENST00000411066 TSHZ3Q63HK5 1081 aa13.12□□□□□ -0.31
RN7SKP259-201ENST00000411066 TTLL7Q6ZT98 887 aa13.12□□□□□ -0.31
RN7SKP259-201ENST00000411066 RILPL2Q969X0 211 aa13.12□□□□□ -0.31
RN7SKP259-201ENST00000411066 ECHDC1Q9NTX5 307 aa13.12□□□□□ -0.31
RN7SKP259-201ENST00000411066 ASAP1Q9ULH1 1129 aa13.12□□□□□ -0.31
RN7SKP259-201ENST00000411066 PA2G4Q9UQ80 394 aaKnown RBP13.12□□□□□ -0.31
RN7SKP259-201ENST00000411066 TJP1Q07157 1748 aa13.11□□□□□ -0.31
RN7SKP259-201ENST00000411066 ATP5J2-PTCD1G3V325 749 aa13.11□□□□□ -0.31
RN7SKP259-201ENST00000411066 SASH1O94885 1247 aa13.11□□□□□ -0.31
RN7SKP259-201ENST00000411066 RFX5P48382 616 aaPredicted RBP13.11□□□□□ -0.31
RN7SKP259-201ENST00000411066 EPHA10Q5JZY3 1008 aa13.11□□□□□ -0.31
RN7SKP259-201ENST00000411066 BARGINQ6ZT62 677 aa13.11□□□□□ -0.31
RN7SKP259-201ENST00000411066 UBE3BQ7Z3V4 1068 aa13.11□□□□□ -0.31
RN7SKP259-201ENST00000411066 SLIT2O94813 1529 aa13.11□□□□□ -0.31
RN7SKP259-201ENST00000411066 SPATA31A5Q5VU36 1347 aa13.11□□□□□ -0.31
RN7SKP259-201ENST00000411066 SPATA31A7Q8IWB4 1347 aa13.11□□□□□ -0.31
RN7SKP259-201ENST00000411066 K7ELQ4 463 aaPredicted RBP13.1□□□□□ -0.31
RN7SKP259-201ENST00000411066 MCCP23508 829 aa13.1□□□□□ -0.31
RN7SKP259-201ENST00000411066 ANAPC15P60006 121 aa13.1□□□□□ -0.31
RN7SKP259-201ENST00000411066 DNAJC10Q8IXB1 793 aa13.1□□□□□ -0.31
RN7SKP259-201ENST00000411066 IL17RAQ96F46 866 aa13.1□□□□□ -0.31
RN7SKP259-201ENST00000411066 ISCA1Q9BUE6 129 aa13.1□□□□□ -0.31
RN7SKP259-201ENST00000411066 CHMP5Q9NZZ3 219 aa13.1□□□□□ -0.31
RN7SKP259-201ENST00000411066 ADAMTS2O95450 1211 aa13.09□□□□□ -0.31
RN7SKP259-201ENST00000411066 PTPN12Q05209 780 aaKnown RBP13.09□□□□□ -0.31
RN7SKP259-201ENST00000411066 TCIRG1Q13488 830 aa13.09□□□□□ -0.31
RN7SKP259-201ENST00000411066 KIF6Q6ZMV9 814 aa13.09□□□□□ -0.31
RN7SKP259-201ENST00000411066 AACSQ86V21 672 aa13.09□□□□□ -0.31
RN7SKP259-201ENST00000411066 UNC5CLQ8IV45 518 aa13.09□□□□□ -0.31
RN7SKP259-201ENST00000411066 DOT1LQ8TEK3 1739 aa13.09□□□□□ -0.31
RN7SKP259-201ENST00000411066 RBM42Q9BTD8 480 aaKnown RBP13.09□□□□□ -0.31
RN7SKP259-201ENST00000411066 SLKQ9H2G2 1235 aaPredicted RBP13.09□□□□□ -0.31
RN7SKP259-201ENST00000411066 CIZ1Q9ULV3 898 aaPredicted RBP13.09□□□□□ -0.31
RN7SKP259-201ENST00000411066 FOXO4P98177 505 aa13.08□□□□□ -0.32
RN7SKP259-201ENST00000411066 DDB1Q16531 1140 aa13.08□□□□□ -0.32
RN7SKP259-201ENST00000411066 HSP90AB3PQ58FF7 597 aa13.08□□□□□ -0.32
RN7SKP259-201ENST00000411066 AEBP2Q6ZN18 517 aaPredicted RBP13.08□□□□□ -0.32
RN7SKP259-201ENST00000411066 EAF2Q96CJ1 260 aaPredicted RBP13.08□□□□□ -0.32
RN7SKP259-201ENST00000411066 EVI5LQ96CN4 794 aa13.08□□□□□ -0.32
RN7SKP259-201ENST00000411066 ZBTB3Q9H5J0 574 aa13.08□□□□□ -0.32
RN7SKP259-201ENST00000411066 MAP3K15Q6ZN16 1313 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms