RNA–Protein interactions for RNA: ENST00000410466.1

RNU6-554P-201, Transcript of RNA, U6 small nuclear 554, pseudogene, humanhuman

BASIC

Gene RNU6-554P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-554P-201ENST00000410466 CLK2P49760 499 aaKnown RBP3.64□□□□□ -1.83
RNU6-554P-201ENST00000410466 TLR1Q15399 786 aa3.64□□□□□ -1.83
RNU6-554P-201ENST00000410466 NBPF1Q3BBV0 1214 aa3.64□□□□□ -1.83
RNU6-554P-201ENST00000410466 SAMD5Q5TGI4 173 aa3.64□□□□□ -1.83
RNU6-554P-201ENST00000410466 DTX1Q86Y01 620 aa3.64□□□□□ -1.83
RNU6-554P-201ENST00000410466 MYCP01106 439 aaPredicted RBP3.63□□□□□ -1.83
RNU6-554P-201ENST00000410466 ZNF865P0CJ78 1059 aaPredicted RBP3.63□□□□□ -1.83
RNU6-554P-201ENST00000410466 TATP17735 454 aaPredicted RBP3.63□□□□□ -1.83
RNU6-554P-201ENST00000410466 ABI1Q8IZP0 508 aa3.63□□□□□ -1.83
RNU6-554P-201ENST00000410466 KRTAP9-3Q9BYQ3 159 aa3.63□□□□□ -1.83
RNU6-554P-201ENST00000410466 JPH1Q9HDC5 661 aaPredicted RBP3.63□□□□□ -1.83
RNU6-554P-201ENST00000410466 ZNF648Q5T619 568 aaPredicted RBP3.62□□□□□ -1.83
RNU6-554P-201ENST00000410466 PARP9Q8IXQ6 854 aa3.62□□□□□ -1.83
RNU6-554P-201ENST00000410466 DMRTC2Q8IXT2 367 aaPredicted RBP3.62□□□□□ -1.83
RNU6-554P-201ENST00000410466 B8ZZF3 427 aa3.61□□□□□ -1.83
RNU6-554P-201ENST00000410466 ZNF124Q15973 351 aa3.61□□□□□ -1.83
RNU6-554P-201ENST00000410466 LILRA6Q6PI73 481 aa3.61□□□□□ -1.83
RNU6-554P-201ENST00000410466 ZDHHC13Q8IUH4 622 aa3.61□□□□□ -1.83
RNU6-554P-201ENST00000410466 DZIP1LQ8IYY4 767 aaKnown RBP3.61□□□□□ -1.83
RNU6-554P-201ENST00000410466 DTWD1Q8N5C7 304 aa3.61□□□□□ -1.83
RNU6-554P-201ENST00000410466 NIFKQ9BYG3 293 aaKnown RBP3.61□□□□□ -1.83
RNU6-554P-201ENST00000410466 RAXQ9Y2V3 346 aa3.61□□□□□ -1.83
RNU6-554P-201ENST00000410466 JUNBP17275 347 aaPredicted RBP3.6□□□□□ -1.83
RNU6-554P-201ENST00000410466 PKN1Q16512 942 aa3.6□□□□□ -1.83
RNU6-554P-201ENST00000410466 IGF2-ASQ6U949 168 aa3.6□□□□□ -1.83
RNU6-554P-201ENST00000410466 BICDL1Q6ZP65 573 aa3.6□□□□□ -1.83
RNU6-554P-201ENST00000410466 FBXO11Q86XK2 927 aa3.6□□□□□ -1.83
RNU6-554P-201ENST00000410466 EPS8L1Q8TE68 723 aa3.6□□□□□ -1.83
RNU6-554P-201ENST00000410466 NUDT8Q8WV74 236 aa3.6□□□□□ -1.83
RNU6-554P-201ENST00000410466 SLC30A3Q99726 388 aa3.6□□□□□ -1.83
RNU6-554P-201ENST00000410466 AKTIPQ9H8T0 292 aa3.6□□□□□ -1.83
RNU6-554P-201ENST00000410466 ZDHHC3Q9NYG2 299 aa3.6□□□□□ -1.83
RNU6-554P-201ENST00000410466 ZBBXA8MT70 800 aa3.59□□□□□ -1.83
RNU6-554P-201ENST00000410466 BUD31P41223 144 aaPredicted RBP3.59□□□□□ -1.83
RNU6-554P-201ENST00000410466 AFF1P51825 1210 aaKnown RBP3.59□□□□□ -1.83
RNU6-554P-201ENST00000410466 TBC1D8BQ0IIM8 1120 aa3.59□□□□□ -1.83
RNU6-554P-201ENST00000410466 SPEM2Q0P670 501 aa3.59□□□□□ -1.83
RNU6-554P-201ENST00000410466 KRTAP19-4Q3LI73 84 aa3.59□□□□□ -1.83
RNU6-554P-201ENST00000410466 STOML1Q9UBI4 398 aa3.59□□□□□ -1.83
RNU6-554P-201ENST00000410466 RAB44Q7Z6P3 723 aaPredicted RBP3.58□□□□□ -1.84
RNU6-554P-201ENST00000410466 ZNF592Q92610 1267 aa3.58□□□□□ -1.84
RNU6-554P-201ENST00000410466 ETNK1Q9HBU6 452 aa3.58□□□□□ -1.84
RNU6-554P-201ENST00000410466 ANGEL1Q9UNK9 670 aaKnown RBP3.58□□□□□ -1.84
RNU6-554P-201ENST00000410466 ITGB5P18084 799 aa3.57□□□□□ -1.84
RNU6-554P-201ENST00000410466 MCCD1P59942 119 aaPredicted RBP3.57□□□□□ -1.84
RNU6-554P-201ENST00000410466 NFIAQ12857 509 aa3.57□□□□□ -1.84
RNU6-554P-201ENST00000410466 MSL1Q68DK7 614 aa3.57□□□□□ -1.84
RNU6-554P-201ENST00000410466 PSAPL1Q6NUJ1 521 aa3.57□□□□□ -1.84
RNU6-554P-201ENST00000410466 UBE2OQ9C0C9 1292 aaKnown RBP3.57□□□□□ -1.84
RNU6-554P-201ENST00000410466 SLC6A14Q9UN76 642 aa3.57□□□□□ -1.84
RNU6-554P-201ENST00000410466 JAG2Q9Y219 1238 aa3.57□□□□□ -1.84
RNU6-554P-201ENST00000410466 AP1G2O75843 785 aa3.56□□□□□ -1.84
RNU6-554P-201ENST00000410466 RGS9O75916 674 aaPredicted RBP3.56□□□□□ -1.84
RNU6-554P-201ENST00000410466 CBLL1Q75N03 491 aa3.56□□□□□ -1.84
RNU6-554P-201ENST00000410466 HMX1Q9NP08 348 aaPredicted RBP3.56□□□□□ -1.84
RNU6-554P-201ENST00000410466 POLR3EQ9NVU0 708 aa3.56□□□□□ -1.84
RNU6-554P-201ENST00000410466 FBXO45P0C2W1 286 aa3.55□□□□□ -1.84
RNU6-554P-201ENST00000410466 SFSWAPQ12872 951 aaKnown RBP3.55□□□□□ -1.84
RNU6-554P-201ENST00000410466 ILDR2Q71H61 639 aa3.55□□□□□ -1.84
RNU6-554P-201ENST00000410466 DBNDD2Q9BQY9 259 aa3.55□□□□□ -1.84
RNU6-554P-201ENST00000410466 RSPH6AQ9H0K4 717 aa3.55□□□□□ -1.84
RNU6-554P-201ENST00000410466 DHX15O43143 795 aaKnown RBP3.54□□□□□ -1.84
RNU6-554P-201ENST00000410466 ALX3O95076 343 aa3.54□□□□□ -1.84
RNU6-554P-201ENST00000410466 STAU1O95793 577 aaKnown RBP3.54□□□□□ -1.84
RNU6-554P-201ENST00000410466 GLB1P16278 677 aa3.54□□□□□ -1.84
RNU6-554P-201ENST00000410466 LRRC69Q6ZNQ3 347 aa3.54□□□□□ -1.84
RNU6-554P-201ENST00000410466 WFDC8Q8IUA0 241 aa3.54□□□□□ -1.84
RNU6-554P-201ENST00000410466 MRPL18Q9H0U6 180 aaKnown RBP3.54□□□□□ -1.84
RNU6-554P-201ENST00000410466 IGFLR1Q9H665 355 aa3.54□□□□□ -1.84
RNU6-554P-201ENST00000410466 NEUROD4Q9HD90 331 aa3.54□□□□□ -1.84
RNU6-554P-201ENST00000410466 PRR19A6NJB7 356 aa3.53□□□□□ -1.84
RNU6-554P-201ENST00000410466 F8W735 103 aaPredicted RBP3.53□□□□□ -1.84
RNU6-554P-201ENST00000410466 FARP2O94887 1054 aaPredicted RBP3.53□□□□□ -1.84
RNU6-554P-201ENST00000410466 USP17L8P0C7I0 530 aa3.53□□□□□ -1.84
RNU6-554P-201ENST00000410466 KSR1Q8IVT5 923 aa3.53□□□□□ -1.84
RNU6-554P-201ENST00000410466 TMEM130Q8N3G9 435 aa3.53□□□□□ -1.84
RNU6-554P-201ENST00000410466 BHMTQ93088 406 aa3.53□□□□□ -1.84
RNU6-554P-201ENST00000410466 NAGPAQ9UK23 515 aa3.53□□□□□ -1.84
RNU6-554P-201ENST00000410466 DLL1O00548 723 aa3.52□□□□□ -1.85
RNU6-554P-201ENST00000410466 RNF43Q68DV7 783 aa3.52□□□□□ -1.85
RNU6-554P-201ENST00000410466 Q6ZS46 218 aa3.52□□□□□ -1.85
RNU6-554P-201ENST00000410466 BARGINQ6ZT62 677 aa3.52□□□□□ -1.85
RNU6-554P-201ENST00000410466 FBXL18Q96ME1 805 aa3.52□□□□□ -1.85
RNU6-554P-201ENST00000410466 CSRNP1Q96S65 589 aa3.52□□□□□ -1.85
RNU6-554P-201ENST00000410466 CDCA7Q9BWT1 371 aaPredicted RBP3.52□□□□□ -1.85
RNU6-554P-201ENST00000410466 C7orf69Q9H7B7 122 aa3.52□□□□□ -1.85
RNU6-554P-201ENST00000410466 CABP1Q9NZU7 370 aa3.52□□□□□ -1.85
RNU6-554P-201ENST00000410466 ZNF330Q9Y3S2 320 aaPredicted RBP3.52□□□□□ -1.85
RNU6-554P-201ENST00000410466 SOCS7O14512 581 aa3.51□□□□□ -1.85
RNU6-554P-201ENST00000410466 SMTNP53814 917 aa3.51□□□□□ -1.85
RNU6-554P-201ENST00000410466 TP53INP2Q8IXH6 220 aa3.51□□□□□ -1.85
RNU6-554P-201ENST00000410466 SLC38A3Q99624 504 aa3.51□□□□□ -1.85
RNU6-554P-201ENST00000410466 BRD7Q9NPI1 651 aa3.51□□□□□ -1.85
RNU6-554P-201ENST00000410466 DNAJB12Q9NXW2 375 aaKnown RBP3.51□□□□□ -1.85
RNU6-554P-201ENST00000410466 DEAF1O75398 565 aaPredicted RBP3.5□□□□□ -1.85
RNU6-554P-201ENST00000410466 INHAP05111 366 aa3.5□□□□□ -1.85
RNU6-554P-201ENST00000410466 GDF10P55107 478 aa3.5□□□□□ -1.85
RNU6-554P-201ENST00000410466 KRTAP1-1Q07627 177 aa3.5□□□□□ -1.85
RNU6-554P-201ENST00000410466 VSIG10LQ86VR7 867 aa3.5□□□□□ -1.85
RNU6-554P-201ENST00000410466 TRIM42Q8IWZ5 723 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms