RNA–Protein interactions for RNA: ENST00000409700.4

PCDHAC1-202, Transcript of protocadherin alpha subfamily C, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHAC1, Length 4,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC1-202ENST00000409700 MAP3K5Q99683 1374 aa12.84□□□□□ -0.35
PCDHAC1-202ENST00000409700 HOXC9P31274 260 aa12.84□□□□□ -0.35
PCDHAC1-202ENST00000409700 CWF19L2Q2TBE0 894 aaKnown RBP12.84□□□□□ -0.35
PCDHAC1-202ENST00000409700 FILIP1Q7Z7B0 1213 aa12.84□□□□□ -0.35
PCDHAC1-202ENST00000409700 RAD50Q92878 1312 aa12.84□□□□□ -0.35
PCDHAC1-202ENST00000409700 C17orf53Q8N3J3 647 aaPredicted RBP12.84□□□□□ -0.35
PCDHAC1-202ENST00000409700 JARID2Q92833 1246 aaPredicted RBP12.84□□□□□ -0.35
PCDHAC1-202ENST00000409700 KIDINS220Q9ULH0 1771 aa12.84□□□□□ -0.35
PCDHAC1-202ENST00000409700 VWDEQ8N2E2 1590 aa12.84□□□□□ -0.35
PCDHAC1-202ENST00000409700 PLEKHG3A1L390 1219 aa12.83□□□□□ -0.35
PCDHAC1-202ENST00000409700 KRT32Q14532 448 aa12.83□□□□□ -0.35
PCDHAC1-202ENST00000409700 TOMM22Q9NS69 142 aa12.83□□□□□ -0.35
PCDHAC1-202ENST00000409700 CFAP45Q9UL16 551 aa12.83□□□□□ -0.35
PCDHAC1-202ENST00000409700 ZDHHC9Q9Y397 364 aa12.83□□□□□ -0.35
PCDHAC1-202ENST00000409700 ARHGAP31Q2M1Z3 1444 aa12.83□□□□□ -0.36
PCDHAC1-202ENST00000409700 SBNO1A3KN83 1393 aa12.83□□□□□ -0.36
PCDHAC1-202ENST00000409700 PPFIA3O75145 1194 aa12.83□□□□□ -0.36
PCDHAC1-202ENST00000409700 IL17REQ8NFR9 667 aa12.83□□□□□ -0.36
PCDHAC1-202ENST00000409700 CHMP4CQ96CF2 233 aa12.83□□□□□ -0.36
PCDHAC1-202ENST00000409700 DEPDC5O75140 1603 aa12.83□□□□□ -0.36
PCDHAC1-202ENST00000409700 ZC3H6P61129 1189 aaKnown RBP12.83□□□□□ -0.36
PCDHAC1-202ENST00000409700 CBX1P83916 185 aa12.83□□□□□ -0.36
PCDHAC1-202ENST00000409700 FAM173BQ6P4H8 233 aa12.83□□□□□ -0.36
PCDHAC1-202ENST00000409700 CLEC17AQ6ZS10 378 aa12.83□□□□□ -0.36
PCDHAC1-202ENST00000409700 MYD88Q99836 296 aa12.83□□□□□ -0.36
PCDHAC1-202ENST00000409700 NCOA3Q9Y6Q9 1424 aa12.83□□□□□ -0.36
PCDHAC1-202ENST00000409700 ZNF500O60304 480 aaPredicted RBP12.83□□□□□ -0.36
PCDHAC1-202ENST00000409700 APPP05067 770 aa12.83□□□□□ -0.36
PCDHAC1-202ENST00000409700 PDIA4P13667 645 aaKnown RBP12.83□□□□□ -0.36
PCDHAC1-202ENST00000409700 SYNE3Q6ZMZ3 975 aa12.83□□□□□ -0.36
PCDHAC1-202ENST00000409700 ZNF771Q7L3S4 317 aaPredicted RBP12.83□□□□□ -0.36
PCDHAC1-202ENST00000409700 PDCL2Q8N4E4 241 aa12.83□□□□□ -0.36
PCDHAC1-202ENST00000409700 CFAP74Q9C0B2 1584 aa12.82□□□□□ -0.36
PCDHAC1-202ENST00000409700 PTPRMP28827 1452 aa12.82□□□□□ -0.36
PCDHAC1-202ENST00000409700 FAM177BA6PVY3 158 aa12.82□□□□□ -0.36
PCDHAC1-202ENST00000409700 KDM4AO75164 1064 aa12.82□□□□□ -0.36
PCDHAC1-202ENST00000409700 HOMER1Q86YM7 354 aa12.82□□□□□ -0.36
PCDHAC1-202ENST00000409700 KCNH5Q8NCM2 988 aa12.82□□□□□ -0.36
PCDHAC1-202ENST00000409700 LRRC59Q96AG4 307 aaKnown RBP12.82□□□□□ -0.36
PCDHAC1-202ENST00000409700 C16orf45Q96MC5 204 aaPredicted RBP12.82□□□□□ -0.36
PCDHAC1-202ENST00000409700 DACT1Q9NYF0 836 aa12.82□□□□□ -0.36
PCDHAC1-202ENST00000409700 NPHP1O15259 732 aa12.82□□□□□ -0.36
PCDHAC1-202ENST00000409700 LARP1Q6PKG0 1096 aaKnown RBP12.82□□□□□ -0.36
PCDHAC1-202ENST00000409700 CCDC112Q8NEF3 446 aa12.82□□□□□ -0.36
PCDHAC1-202ENST00000409700 LGR6Q9HBX8 967 aa12.82□□□□□ -0.36
PCDHAC1-202ENST00000409700 TTC41PQ6P2S7 1318 aa12.82□□□□□ -0.36
PCDHAC1-202ENST00000409700 NMIQ13287 307 aaPredicted RBP12.82□□□□□ -0.36
PCDHAC1-202ENST00000409700 CUL4AQ13619 759 aa12.82□□□□□ -0.36
PCDHAC1-202ENST00000409700 SSH3Q8TE77 659 aa12.82□□□□□ -0.36
PCDHAC1-202ENST00000409700 PRIMPOLQ96LW4 560 aa12.82□□□□□ -0.36
PCDHAC1-202ENST00000409700 HYPKQ9NX55 129 aa12.82□□□□□ -0.36
PCDHAC1-202ENST00000409700 NEXMIFQ5QGS0 1516 aa12.81□□□□□ -0.36
PCDHAC1-202ENST00000409700 ZNF165P49910 485 aa12.81□□□□□ -0.36
PCDHAC1-202ENST00000409700 AMOTQ4VCS5 1084 aa12.81□□□□□ -0.36
PCDHAC1-202ENST00000409700 NAT10Q9H0A0 1025 aaKnown RBP12.81□□□□□ -0.36
PCDHAC1-202ENST00000409700 GUCY1B3Q02153 619 aa12.81□□□□□ -0.36
PCDHAC1-202ENST00000409700 LRRFIP1Q32MZ4 808 aaKnown RBP12.81□□□□□ -0.36
PCDHAC1-202ENST00000409700 VPS53Q5VIR6 699 aa12.81□□□□□ -0.36
PCDHAC1-202ENST00000409700 CREB3L3Q68CJ9 461 aa12.81□□□□□ -0.36
PCDHAC1-202ENST00000409700 RALYLQ86SE5 291 aaKnown RBP12.81□□□□□ -0.36
PCDHAC1-202ENST00000409700 RASEFQ8IZ41 740 aa12.81□□□□□ -0.36
PCDHAC1-202ENST00000409700 ZNF396Q96N95 335 aaPredicted RBP12.81□□□□□ -0.36
PCDHAC1-202ENST00000409700 CAMSAP1Q5T5Y3 1602 aa12.8□□□□□ -0.36
PCDHAC1-202ENST00000409700 AOX1Q06278 1338 aa12.8□□□□□ -0.36
PCDHAC1-202ENST00000409700 SMC2O95347 1197 aa12.8□□□□□ -0.36
PCDHAC1-202ENST00000409700 STK38Q15208 465 aa12.8□□□□□ -0.36
PCDHAC1-202ENST00000409700 FAM200AQ8TCP9 573 aa12.8□□□□□ -0.36
PCDHAC1-202ENST00000409700 LRRC2Q9BYS8 371 aa12.8□□□□□ -0.36
PCDHAC1-202ENST00000409700 CPSF1Q10570 1443 aaKnown RBP12.8□□□□□ -0.36
PCDHAC1-202ENST00000409700 ARHGEF10O15013 1369 aa12.8□□□□□ -0.36
PCDHAC1-202ENST00000409700 GRM8O00222 908 aa12.8□□□□□ -0.36
PCDHAC1-202ENST00000409700 CYP2E1P05181 493 aaPredicted RBP12.8□□□□□ -0.36
PCDHAC1-202ENST00000409700 TRDNQ13061 729 aa12.8□□□□□ -0.36
PCDHAC1-202ENST00000409700 KSR2Q6VAB6 950 aa12.8□□□□□ -0.36
PCDHAC1-202ENST00000409700 RUFY3Q7L099 469 aa12.8□□□□□ -0.36
PCDHAC1-202ENST00000409700 DDX19AQ9NUU7 478 aaKnown RBP12.8□□□□□ -0.36
PCDHAC1-202ENST00000409700 STAP2Q9UGK3 403 aa12.8□□□□□ -0.36
PCDHAC1-202ENST00000409700 ALKQ9UM73 1620 aa12.8□□□□□ -0.36
PCDHAC1-202ENST00000409700 SHPRHQ149N8 1683 aa12.8□□□□□ -0.36
PCDHAC1-202ENST00000409700 CPLX2Q6PUV4 134 aaKnown RBP12.8□□□□□ -0.36
PCDHAC1-202ENST00000409700 CCDC186Q7Z3E2 898 aa12.8□□□□□ -0.36
PCDHAC1-202ENST00000409700 CLIP2Q9UDT6 1046 aa12.8□□□□□ -0.36
PCDHAC1-202ENST00000409700 ARHGEF40Q8TER5 1519 aa12.79□□□□□ -0.36
PCDHAC1-202ENST00000409700 ZC3H13Q5T200 1668 aaKnown RBP12.79□□□□□ -0.36
PCDHAC1-202ENST00000409700 TATP17735 454 aaPredicted RBP12.79□□□□□ -0.36
PCDHAC1-202ENST00000409700 ANO6Q4KMQ2 910 aa12.79□□□□□ -0.36
PCDHAC1-202ENST00000409700 CCDC171Q6TFL3 1326 aa12.79□□□□□ -0.36
PCDHAC1-202ENST00000409700 FAM227BQ96M60 508 aa12.79□□□□□ -0.36
PCDHAC1-202ENST00000409700 ALDH1L1O75891 902 aa12.79□□□□□ -0.36
PCDHAC1-202ENST00000409700 LTKP29376 864 aa12.79□□□□□ -0.36
PCDHAC1-202ENST00000409700 TERF1P54274 439 aa12.79□□□□□ -0.36
PCDHAC1-202ENST00000409700 CCT2P78371 535 aaKnown RBP12.79□□□□□ -0.36
PCDHAC1-202ENST00000409700 SIRT1Q96EB6 747 aa12.79□□□□□ -0.36
PCDHAC1-202ENST00000409700 NEK1Q96PY6 1258 aa12.79□□□□□ -0.36
PCDHAC1-202ENST00000409700 NEURL4Q96JN8 1562 aa12.79□□□□□ -0.36
PCDHAC1-202ENST00000409700 FKBP4Q02790 459 aaKnown RBP eCLIP12.78□□□□□ -0.36
PCDHAC1-202ENST00000409700 TYRO3Q06418 890 aa12.78□□□□□ -0.36
PCDHAC1-202ENST00000409700 LUZP1Q86V48 1076 aa12.78□□□□□ -0.36
PCDHAC1-202ENST00000409700 RGS12O14924 1447 aa12.78□□□□□ -0.36
PCDHAC1-202ENST00000409700 COL3A1P02461 1466 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms