RNA–Protein interactions for RNA: ENST00000409579.5

AFF3-203, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene AFF3, Length 4,342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-203ENST00000409579 MAGI2Q86UL8 1455 aa17.62■□□□□ 0.41
AFF3-203ENST00000409579 ZNF213O14771 459 aa17.62■□□□□ 0.41
AFF3-203ENST00000409579 ATP10AO60312 1499 aa17.62■□□□□ 0.41
AFF3-203ENST00000409579 SERPINC1P01008 464 aa17.61■□□□□ 0.41
AFF3-203ENST00000409579 MAP3K11Q16584 847 aa17.61■□□□□ 0.41
AFF3-203ENST00000409579 RAB11FIP4Q86YS3 637 aa17.61■□□□□ 0.41
AFF3-203ENST00000409579 LGR6Q9HBX8 967 aa17.61■□□□□ 0.41
AFF3-203ENST00000409579 YEATS2Q9ULM3 1422 aa17.61■□□□□ 0.41
AFF3-203ENST00000409579 GJB2P29033 226 aa17.61■□□□□ 0.41
AFF3-203ENST00000409579 MAP3K12Q12852 859 aa17.61■□□□□ 0.41
AFF3-203ENST00000409579 MNS1Q8NEH6 495 aa17.61■□□□□ 0.41
AFF3-203ENST00000409579 MAP3K5Q99683 1374 aa17.61■□□□□ 0.41
AFF3-203ENST00000409579 STX6O43752 255 aa17.61■□□□□ 0.41
AFF3-203ENST00000409579 LRRC2Q9BYS8 371 aa17.61■□□□□ 0.41
AFF3-203ENST00000409579 ZPR1O75312 459 aa17.6■□□□□ 0.41
AFF3-203ENST00000409579 TXLNAP40222 546 aa17.6■□□□□ 0.41
AFF3-203ENST00000409579 MSH6P52701 1360 aa17.6■□□□□ 0.41
AFF3-203ENST00000409579 SCAND2PQ9GZW5 306 aaPredicted RBP17.6■□□□□ 0.41
AFF3-203ENST00000409579 RBM27Q9P2N5 1060 aaKnown RBP17.6■□□□□ 0.41
AFF3-203ENST00000409579 KDM2BQ8NHM5 1336 aa17.6■□□□□ 0.41
AFF3-203ENST00000409579 CCDC43Q96MW1 224 aaKnown RBP17.6■□□□□ 0.41
AFF3-203ENST00000409579 EDC4Q6P2E9 1401 aaKnown RBP17.6■□□□□ 0.41
AFF3-203ENST00000409579 GCC2Q8IWJ2 1684 aa17.6■□□□□ 0.41
AFF3-203ENST00000409579 CKAP2LQ8IYA6 745 aa17.59■□□□□ 0.41
AFF3-203ENST00000409579 C8orf76Q96K31 380 aa17.59■□□□□ 0.41
AFF3-203ENST00000409579 TEX13AQ9BXU3 409 aaPredicted RBP17.59■□□□□ 0.41
AFF3-203ENST00000409579 CAVIN4Q5BKX8 364 aa17.59■□□□□ 0.41
AFF3-203ENST00000409579 NEK1Q96PY6 1258 aa17.59■□□□□ 0.41
AFF3-203ENST00000409579 PPP1R1BQ9UD71 204 aaPredicted RBP17.59■□□□□ 0.41
AFF3-203ENST00000409579 ABCA8O94911 1581 aa17.59■□□□□ 0.41
AFF3-203ENST00000409579 RNMTO43148 476 aaKnown RBP17.58■□□□□ 0.41
AFF3-203ENST00000409579 RBM8AQ9Y5S9 174 aaKnown RBP17.58■□□□□ 0.41
AFF3-203ENST00000409579 PDIA4P13667 645 aaKnown RBP17.58■□□□□ 0.4
AFF3-203ENST00000409579 CEP57L1Q8IYX8 460 aa17.58■□□□□ 0.4
AFF3-203ENST00000409579 SLC5A1P13866 664 aa17.58■□□□□ 0.4
AFF3-203ENST00000409579 RBM5P52756 815 aaKnown RBP eCLIP17.58■□□□□ 0.4
AFF3-203ENST00000409579 BRF1Q92994 677 aa17.58■□□□□ 0.4
AFF3-203ENST00000409579 ZMYM4Q5VZL5 1548 aa17.57■□□□□ 0.4
AFF3-203ENST00000409579 HMGB1P09429 215 aaKnown RBP17.57■□□□□ 0.4
AFF3-203ENST00000409579 GOLGA8BA8MQT2 603 aa17.57■□□□□ 0.4
AFF3-203ENST00000409579 NAP1L1P55209 391 aaKnown RBP17.57■□□□□ 0.4
AFF3-203ENST00000409579 ACSBG1Q96GR2 724 aa17.57■□□□□ 0.4
AFF3-203ENST00000409579 RANBP6O60518 1105 aaKnown RBP17.57■□□□□ 0.4
AFF3-203ENST00000409579 CDK5RAP3Q96JB5 506 aa17.57■□□□□ 0.4
AFF3-203ENST00000409579 BLMP54132 1417 aaPredicted RBP17.57■□□□□ 0.4
AFF3-203ENST00000409579 RBM10P98175 930 aaKnown RBP17.56■□□□□ 0.4
AFF3-203ENST00000409579 ZSCAN29Q8IWY8 852 aaPredicted RBP17.56■□□□□ 0.4
AFF3-203ENST00000409579 IFIT3O14879 490 aaKnown RBP17.56■□□□□ 0.4
AFF3-203ENST00000409579 ARHGEF5Q12774 1597 aa17.56■□□□□ 0.4
AFF3-203ENST00000409579 FILIP1LQ4L180 1135 aa17.56■□□□□ 0.4
AFF3-203ENST00000409579 CCDC183Q5T5S1 534 aa17.56■□□□□ 0.4
AFF3-203ENST00000409579 ANKIB1Q9P2G1 1089 aa17.56■□□□□ 0.4
AFF3-203ENST00000409579 IQSEC3Q9UPP2 1182 aaPredicted RBP17.56■□□□□ 0.4
AFF3-203ENST00000409579 NBPF6Q5VWK0 638 aa17.55■□□□□ 0.4
AFF3-203ENST00000409579 CCDC144CPQ8IYA2 1237 aa17.55■□□□□ 0.4
AFF3-203ENST00000409579 NBPF4Q96M43 638 aa17.55■□□□□ 0.4
AFF3-203ENST00000409579 HMGN5P82970 282 aaKnown RBP17.55■□□□□ 0.4
AFF3-203ENST00000409579 USP16Q9Y5T5 823 aa17.55■□□□□ 0.4
AFF3-203ENST00000409579 SOS1Q07889 1333 aaPredicted RBP17.55■□□□□ 0.4
AFF3-203ENST00000409579 PLEKHG3A1L390 1219 aa17.55■□□□□ 0.4
AFF3-203ENST00000409579 OFD1O75665 1012 aa17.55■□□□□ 0.4
AFF3-203ENST00000409579 ZGPATQ8N5A5 531 aaKnown RBP17.55■□□□□ 0.4
AFF3-203ENST00000409579 NOL7Q9UMY1 257 aaKnown RBP17.55■□□□□ 0.4
AFF3-203ENST00000409579 TRPM2O94759 1503 aa17.55■□□□□ 0.4
AFF3-203ENST00000409579 SOGA3Q5TF21 947 aa17.54■□□□□ 0.4
AFF3-203ENST00000409579 DDX21Q9NR30 783 aaKnown RBP eCLIP17.54■□□□□ 0.4
AFF3-203ENST00000409579 USP25Q9UHP3 1055 aa17.54■□□□□ 0.4
AFF3-203ENST00000409579 UGGT1Q9NYU2 1555 aa17.54■□□□□ 0.4
AFF3-203ENST00000409579 DDX17Q92841 729 aaKnown RBP17.54■□□□□ 0.4
AFF3-203ENST00000409579 SNX21Q969T3 373 aa17.54■□□□□ 0.4
AFF3-203ENST00000409579 PHF23Q9BUL5 403 aaPredicted RBP17.54■□□□□ 0.4
AFF3-203ENST00000409579 SBNO1A3KN83 1393 aa17.54■□□□□ 0.4
AFF3-203ENST00000409579 SAMD9LQ8IVG5 1584 aa17.54■□□□□ 0.4
AFF3-203ENST00000409579 USP5P45974 858 aa17.53■□□□□ 0.4
AFF3-203ENST00000409579 ZSCAN30Q86W11 494 aa17.53■□□□□ 0.4
AFF3-203ENST00000409579 MICU3Q86XE3 530 aa17.53■□□□□ 0.4
AFF3-203ENST00000409579 CHMLP26374 656 aa17.53■□□□□ 0.4
AFF3-203ENST00000409579 CCDC70Q6NSX1 233 aa17.53■□□□□ 0.4
AFF3-203ENST00000409579 FAM177A1Q8N128 213 aaPredicted RBP17.53■□□□□ 0.4
AFF3-203ENST00000409579 KLHL40Q2TBA0 621 aa17.53■□□□□ 0.4
AFF3-203ENST00000409579 DCAF5Q96JK2 942 aa17.53■□□□□ 0.4
AFF3-203ENST00000409579 TMEM2Q9UHN6 1383 aa17.53■□□□□ 0.4
AFF3-203ENST00000409579 PLA2R1Q13018 1463 aa17.53■□□□□ 0.4
AFF3-203ENST00000409579 IL2RBP14784 551 aa17.53■□□□□ 0.4
AFF3-203ENST00000409579 KLHDC4Q8TBB5 520 aa17.53■□□□□ 0.4
AFF3-203ENST00000409579 MKNK2Q9HBH9 465 aa17.53■□□□□ 0.4
AFF3-203ENST00000409579 PNMA6EA0A0J9YXQ4 647 aa17.52■□□□□ 0.4
AFF3-203ENST00000409579 NMIQ13287 307 aaPredicted RBP17.52■□□□□ 0.4
AFF3-203ENST00000409579 ATP2B3Q16720 1220 aa17.52■□□□□ 0.4
AFF3-203ENST00000409579 ORC3Q9UBD5 711 aaPredicted RBP17.52■□□□□ 0.4
AFF3-203ENST00000409579 SLC12A7Q9Y666 1083 aa17.52■□□□□ 0.4
AFF3-203ENST00000409579 POLR3DP05423 398 aaPredicted RBP17.52■□□□□ 0.4
AFF3-203ENST00000409579 DZIP1Q86YF9 867 aaKnown RBP17.52■□□□□ 0.4
AFF3-203ENST00000409579 WASF1Q92558 559 aa17.52■□□□□ 0.4
AFF3-203ENST00000409579 ZHX3Q9H4I2 956 aa17.52■□□□□ 0.4
AFF3-203ENST00000409579 BICC1Q9H694 974 aaKnown RBP17.52■□□□□ 0.4
AFF3-203ENST00000409579 SBNO2Q9Y2G9 1366 aa17.52■□□□□ 0.4
AFF3-203ENST00000409579 USP26Q9BXU7 913 aa17.52■□□□□ 0.39
AFF3-203ENST00000409579 NBPF7P0C2Y1 421 aaPredicted RBP17.51■□□□□ 0.39
AFF3-203ENST00000409579 ANAPC15P60006 121 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms