RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 LRRC4BQ9NT99 713 aa21.31■■□□□ 1
SSB-202ENST00000409333 PPP4R2Q9NY27 417 aa21.31■■□□□ 1
SSB-202ENST00000409333 C4AP0C0L4 1744 aa21.3■■□□□ 1
SSB-202ENST00000409333 IL6STP40189 918 aaPredicted RBP21.3■■□□□ 1
SSB-202ENST00000409333 APBA3O96018 575 aa21.29■■□□□ 1
SSB-202ENST00000409333 CNTNAP4Q9C0A0 1308 aa21.29■■□□□ 1
SSB-202ENST00000409333 ZBTB7BO15156 539 aaPredicted RBP21.28■■□□□ 1
SSB-202ENST00000409333 PLBD2Q8NHP8 589 aa21.28■■□□□ 1
SSB-202ENST00000409333 EIF5P55010 431 aaKnown RBP21.28■■□□□ 1
SSB-202ENST00000409333 BEND3Q5T5X7 828 aa21.28■■□□□ 1
SSB-202ENST00000409333 ZBTB3Q9H5J0 574 aa21.28■■□□□ 1
SSB-202ENST00000409333 TUBGCP6Q96RT7 1819 aa21.27■■□□□ 1
SSB-202ENST00000409333 SCN7AQ01118 1682 aa21.26■□□□□ 0.99
SSB-202ENST00000409333 PLSCR1O15162 318 aa21.26■□□□□ 0.99
SSB-202ENST00000409333 TXNRD1Q16881 649 aa21.26■□□□□ 0.99
SSB-202ENST00000409333 SLC27A3Q5K4L6 730 aa21.26■□□□□ 0.99
SSB-202ENST00000409333 B4GALNT3Q6L9W6 998 aa21.26■□□□□ 0.99
SSB-202ENST00000409333 PROM2Q8N271 834 aa21.26■□□□□ 0.99
SSB-202ENST00000409333 SRCIN1Q9C0H9 1055 aa21.26■□□□□ 0.99
SSB-202ENST00000409333 ZBTB40Q9NUA8 1239 aa21.26■□□□□ 0.99
SSB-202ENST00000409333 KIF6Q6ZMV9 814 aa21.25■□□□□ 0.99
SSB-202ENST00000409333 ARXQ96QS3 562 aa21.25■□□□□ 0.99
SSB-202ENST00000409333 MYD88Q99836 296 aa21.25■□□□□ 0.99
SSB-202ENST00000409333 METTL22Q9BUU2 404 aaPredicted RBP21.25■□□□□ 0.99
SSB-202ENST00000409333 COL15A1P39059 1388 aa21.25■□□□□ 0.99
SSB-202ENST00000409333 CWF19L2Q2TBE0 894 aaKnown RBP21.25■□□□□ 0.99
SSB-202ENST00000409333 RC3H1Q5TC82 1133 aaKnown RBP21.25■□□□□ 0.99
SSB-202ENST00000409333 MEIS3Q99687 375 aa21.25■□□□□ 0.99
SSB-202ENST00000409333 MAP3K15Q6ZN16 1313 aa21.23■□□□□ 0.99
SSB-202ENST00000409333 IGKV5-2P06315 115 aa21.23■□□□□ 0.99
SSB-202ENST00000409333 AAMPQ13685 434 aa21.23■□□□□ 0.99
SSB-202ENST00000409333 NPM2Q86SE8 214 aaKnown RBP21.23■□□□□ 0.99
SSB-202ENST00000409333 DZIP3Q86Y13 1208 aaKnown RBP21.23■□□□□ 0.99
SSB-202ENST00000409333 TBC1D2BQ9UPU7 963 aa21.23■□□□□ 0.99
SSB-202ENST00000409333 LINS1Q8NG48 757 aa21.23■□□□□ 0.99
SSB-202ENST00000409333 CCDC136Q96JN2 1154 aa21.23■□□□□ 0.99
SSB-202ENST00000409333 C1orf115Q9H7X2 142 aa21.23■□□□□ 0.99
SSB-202ENST00000409333 GNPATO15228 680 aa21.22■□□□□ 0.99
SSB-202ENST00000409333 NEXNQ0ZGT2 675 aa21.22■□□□□ 0.99
SSB-202ENST00000409333 SMIM5Q71RC9 77 aa21.22■□□□□ 0.99
SSB-202ENST00000409333 PCDHB15Q9Y5E8 787 aa21.22■□□□□ 0.99
SSB-202ENST00000409333 ALDH1L1O75891 902 aa21.21■□□□□ 0.99
SSB-202ENST00000409333 AMIGO3Q86WK7 504 aa21.21■□□□□ 0.99
SSB-202ENST00000409333 CHMP4BQ9H444 224 aaKnown RBP21.21■□□□□ 0.99
SSB-202ENST00000409333 NEURL1BA8MQ27 555 aa21.2■□□□□ 0.99
SSB-202ENST00000409333 ATP5J2-PTCD1G3V325 749 aa21.2■□□□□ 0.99
SSB-202ENST00000409333 RPS6KA4O75676 772 aa21.2■□□□□ 0.99
SSB-202ENST00000409333 HLFQ16534 295 aa21.2■□□□□ 0.99
SSB-202ENST00000409333 USP44Q9H0E7 712 aa21.2■□□□□ 0.99
SSB-202ENST00000409333 AK7Q96M32 723 aa21.2■□□□□ 0.98
SSB-202ENST00000409333 GIGYF2Q6Y7W6 1299 aaKnown RBP21.18■□□□□ 0.98
SSB-202ENST00000409333 RTCBQ9Y3I0 505 aaKnown RBP21.18■□□□□ 0.98
SSB-202ENST00000409333 ERVV-1B6SEH8 477 aa21.18■□□□□ 0.98
SSB-202ENST00000409333 CAMTA2O94983 1202 aa21.18■□□□□ 0.98
SSB-202ENST00000409333 NBPF7P0C2Y1 421 aaPredicted RBP21.18■□□□□ 0.98
SSB-202ENST00000409333 EN1Q05925 392 aaPredicted RBP21.17■□□□□ 0.98
SSB-202ENST00000409333 TCIRG1Q13488 830 aa21.17■□□□□ 0.98
SSB-202ENST00000409333 IBTKQ9P2D0 1353 aaPredicted RBP21.17■□□□□ 0.98
SSB-202ENST00000409333 A0A087WZG4 1122 aa21.16■□□□□ 0.98
SSB-202ENST00000409333 GNAI3P08754 354 aa21.16■□□□□ 0.98
SSB-202ENST00000409333 GCKRQ14397 625 aa21.16■□□□□ 0.98
SSB-202ENST00000409333 EZH2Q15910 746 aaKnown RBP21.16■□□□□ 0.98
SSB-202ENST00000409333 PHF14O94880 888 aa21.15■□□□□ 0.98
SSB-202ENST00000409333 CAMKK2Q96RR4 588 aa21.15■□□□□ 0.98
SSB-202ENST00000409333 ISCA1Q9BUE6 129 aa21.15■□□□□ 0.98
SSB-202ENST00000409333 C9orf78Q9NZ63 289 aaPredicted RBP21.15■□□□□ 0.98
SSB-202ENST00000409333 MYH3P11055 1940 aa21.15■□□□□ 0.98
SSB-202ENST00000409333 GRM8O00222 908 aa21.15■□□□□ 0.98
SSB-202ENST00000409333 UBTFL1P0CB47 393 aaPredicted RBP21.15■□□□□ 0.98
SSB-202ENST00000409333 SF3B2Q13435 895 aaKnown RBP21.14■□□□□ 0.97
SSB-202ENST00000409333 ZNF827Q17R98 1081 aa21.14■□□□□ 0.97
SSB-202ENST00000409333 CASZ1Q86V15 1759 aa21.14■□□□□ 0.97
SSB-202ENST00000409333 UTYO14607 1347 aa21.14■□□□□ 0.97
SSB-202ENST00000409333 IGHDP01880 384 aa21.13■□□□□ 0.97
SSB-202ENST00000409333 GNAI2P04899 355 aa21.13■□□□□ 0.97
SSB-202ENST00000409333 GPTP24298 496 aa21.13■□□□□ 0.97
SSB-202ENST00000409333 HSP90AB3PQ58FF7 597 aa21.13■□□□□ 0.97
SSB-202ENST00000409333 ARHGEF1Q92888 912 aaKnown RBP21.13■□□□□ 0.97
SSB-202ENST00000409333 CWC25Q9NXE8 425 aaPredicted RBP21.13■□□□□ 0.97
SSB-202ENST00000409333 LRRFIP2Q9Y608 721 aaKnown RBP21.13■□□□□ 0.97
SSB-202ENST00000409333 QSER1Q2KHR3 1735 aa21.13■□□□□ 0.97
SSB-202ENST00000409333 COL24A1Q17RW2 1714 aa21.13■□□□□ 0.97
SSB-202ENST00000409333 DEFB132Q7Z7B7 95 aa21.13■□□□□ 0.97
SSB-202ENST00000409333 CCDC191Q8NCU4 936 aa21.13■□□□□ 0.97
SSB-202ENST00000409333 SRP68Q9UHB9 627 aaKnown RBP21.13■□□□□ 0.97
SSB-202ENST00000409333 NARFQ9UHQ1 456 aa21.13■□□□□ 0.97
SSB-202ENST00000409333 BAG6P46379 1132 aa21.12■□□□□ 0.97
SSB-202ENST00000409333 TRAPPC3LQ5T215 181 aa21.12■□□□□ 0.97
SSB-202ENST00000409333 JARID2Q92833 1246 aaPredicted RBP21.12■□□□□ 0.97
SSB-202ENST00000409333 AKT1S1Q96B36 256 aa21.12■□□□□ 0.97
SSB-202ENST00000409333 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.11■□□□□ 0.97
SSB-202ENST00000409333 HMGB2P26583 209 aaKnown RBP21.11■□□□□ 0.97
SSB-202ENST00000409333 CEP85Q6P2H3 762 aa21.11■□□□□ 0.97
SSB-202ENST00000409333 SIRT2Q8IXJ6 389 aa21.11■□□□□ 0.97
SSB-202ENST00000409333 ZNF34Q8IZ26 560 aa21.11■□□□□ 0.97
SSB-202ENST00000409333 BCL2L12Q9HB09 334 aa21.11■□□□□ 0.97
SSB-202ENST00000409333 UBN2Q6ZU65 1347 aa21.11■□□□□ 0.97
SSB-202ENST00000409333 KDM2BQ8NHM5 1336 aa21.11■□□□□ 0.97
SSB-202ENST00000409333 SSFA2P28290 1259 aa21.1■□□□□ 0.97
SSB-202ENST00000409333 TRIM28Q13263 835 aaKnown RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms