RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 HLFQ16534 295 aa17.99■□□□□ 0.47
CHRNA1-204ENST00000409323 USPL1Q5W0Q7 1092 aa17.99■□□□□ 0.47
CHRNA1-204ENST00000409323 KIF6Q6ZMV9 814 aa17.99■□□□□ 0.47
CHRNA1-204ENST00000409323 PI4KAP1Q8N8J0 262 aa17.99■□□□□ 0.47
CHRNA1-204ENST00000409323 ADCY9O60503 1353 aa17.99■□□□□ 0.47
CHRNA1-204ENST00000409323 ARFGEF2Q9Y6D5 1785 aa17.99■□□□□ 0.47
CHRNA1-204ENST00000409323 SSFA2P28290 1259 aa17.98■□□□□ 0.47
CHRNA1-204ENST00000409323 SLC4A10Q6U841 1118 aa17.98■□□□□ 0.47
CHRNA1-204ENST00000409323 ANKRD13DQ6ZTN6 518 aa17.98■□□□□ 0.47
CHRNA1-204ENST00000409323 RIC3Q7Z5B4 369 aa17.98■□□□□ 0.47
CHRNA1-204ENST00000409323 MAP3K2Q9Y2U5 619 aa17.98■□□□□ 0.47
CHRNA1-204ENST00000409323 KIF16BQ96L93 1317 aa17.98■□□□□ 0.47
CHRNA1-204ENST00000409323 CAMTA2O94983 1202 aa17.97■□□□□ 0.47
CHRNA1-204ENST00000409323 TRIM27P14373 513 aa17.97■□□□□ 0.47
CHRNA1-204ENST00000409323 NUP98P52948 1817 aa17.97■□□□□ 0.47
CHRNA1-204ENST00000409323 SOCS7O14512 581 aa17.96■□□□□ 0.47
CHRNA1-204ENST00000409323 C20orf194Q5TEA3 1177 aa17.96■□□□□ 0.47
CHRNA1-204ENST00000409323 MSL1Q68DK7 614 aa17.96■□□□□ 0.47
CHRNA1-204ENST00000409323 MAP3K15Q6ZN16 1313 aa17.96■□□□□ 0.47
CHRNA1-204ENST00000409323 BCORQ6W2J9 1755 aa17.96■□□□□ 0.47
CHRNA1-204ENST00000409323 ZPR1O75312 459 aa17.96■□□□□ 0.46
CHRNA1-204ENST00000409323 BRPF1P55201 1214 aaPredicted RBP17.96■□□□□ 0.46
CHRNA1-204ENST00000409323 RRP1P56182 461 aaKnown RBP17.96■□□□□ 0.46
CHRNA1-204ENST00000409323 IRX6P78412 446 aaPredicted RBP17.96■□□□□ 0.46
CHRNA1-204ENST00000409323 ZKSCAN2Q63HK3 967 aa17.96■□□□□ 0.46
CHRNA1-204ENST00000409323 BICDL1Q6ZP65 573 aa17.96■□□□□ 0.46
CHRNA1-204ENST00000409323 PLBD2Q8NHP8 589 aa17.96■□□□□ 0.46
CHRNA1-204ENST00000409323 SCN7AQ01118 1682 aa17.95■□□□□ 0.46
CHRNA1-204ENST00000409323 PTPRCP08575 1304 aa17.95■□□□□ 0.46
CHRNA1-204ENST00000409323 USP42Q9H9J4 1324 aaKnown RBP17.95■□□□□ 0.46
CHRNA1-204ENST00000409323 A0A087WZG4 1122 aa17.95■□□□□ 0.46
CHRNA1-204ENST00000409323 ATP5J2-PTCD1G3V325 749 aa17.95■□□□□ 0.46
CHRNA1-204ENST00000409323 DDX58O95786 925 aaKnown RBP17.95■□□□□ 0.46
CHRNA1-204ENST00000409323 RLBP1P12271 317 aa17.95■□□□□ 0.46
CHRNA1-204ENST00000409323 GPTP24298 496 aa17.95■□□□□ 0.46
CHRNA1-204ENST00000409323 KSR2Q6VAB6 950 aa17.95■□□□□ 0.46
CHRNA1-204ENST00000409323 ATF7IPQ6VMQ6 1270 aa17.95■□□□□ 0.46
CHRNA1-204ENST00000409323 PANK1Q8TE04 598 aa17.95■□□□□ 0.46
CHRNA1-204ENST00000409323 MYD88Q99836 296 aa17.95■□□□□ 0.46
CHRNA1-204ENST00000409323 BCL2L12Q9HB09 334 aa17.95■□□□□ 0.46
CHRNA1-204ENST00000409323 NARFQ9UHQ1 456 aa17.95■□□□□ 0.46
CHRNA1-204ENST00000409323 ADRA2BP18089 450 aa17.94■□□□□ 0.46
CHRNA1-204ENST00000409323 DNAAF4Q8WXU2 420 aa17.94■□□□□ 0.46
CHRNA1-204ENST00000409323 QSER1Q2KHR3 1735 aa17.93■□□□□ 0.46
CHRNA1-204ENST00000409323 FAM177BA6PVY3 158 aa17.93■□□□□ 0.46
CHRNA1-204ENST00000409323 FKBP8Q14318 412 aa17.93■□□□□ 0.46
CHRNA1-204ENST00000409323 IPO8O15397 1037 aaKnown RBP17.92■□□□□ 0.46
CHRNA1-204ENST00000409323 GYS1P13807 737 aa17.92■□□□□ 0.46
CHRNA1-204ENST00000409323 HMGB2P26583 209 aaKnown RBP17.92■□□□□ 0.46
CHRNA1-204ENST00000409323 CWF19L2Q2TBE0 894 aaKnown RBP17.92■□□□□ 0.46
CHRNA1-204ENST00000409323 TBC1D9BQ66K14 1250 aa17.92■□□□□ 0.46
CHRNA1-204ENST00000409323 AFDNP55196 1824 aaKnown RBP17.92■□□□□ 0.46
CHRNA1-204ENST00000409323 GIGYF2Q6Y7W6 1299 aaKnown RBP17.91■□□□□ 0.46
CHRNA1-204ENST00000409323 FTSJ3Q8IY81 847 aaKnown RBP17.91■□□□□ 0.46
CHRNA1-204ENST00000409323 API5Q9BZZ5 524 aaKnown RBP17.91■□□□□ 0.46
CHRNA1-204ENST00000409323 DZIP1LQ8IYY4 767 aaKnown RBP17.91■□□□□ 0.46
CHRNA1-204ENST00000409323 TMEM57Q8N5G2 664 aa17.91■□□□□ 0.46
CHRNA1-204ENST00000409323 JARID2Q92833 1246 aaPredicted RBP17.91■□□□□ 0.46
CHRNA1-204ENST00000409323 METTL22Q9BUU2 404 aaPredicted RBP17.91■□□□□ 0.46
CHRNA1-204ENST00000409323 ERVV-1B6SEH8 477 aa17.9■□□□□ 0.46
CHRNA1-204ENST00000409323 ZBTB7AO95365 584 aa17.9■□□□□ 0.46
CHRNA1-204ENST00000409323 FLAD1Q8NFF5 587 aa17.9■□□□□ 0.46
CHRNA1-204ENST00000409323 ARHGAP45Q92619 1136 aa17.9■□□□□ 0.46
CHRNA1-204ENST00000409323 ANKRD36CQ5JPF3 1778 aa17.9■□□□□ 0.46
CHRNA1-204ENST00000409323 IGKV5-2P06315 115 aa17.89■□□□□ 0.45
CHRNA1-204ENST00000409323 TCIRG1Q13488 830 aa17.89■□□□□ 0.45
CHRNA1-204ENST00000409323 RTL5Q5HYW3 569 aaPredicted RBP17.89■□□□□ 0.45
CHRNA1-204ENST00000409323 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.89■□□□□ 0.45
CHRNA1-204ENST00000409323 NIP7Q9Y221 180 aaKnown RBP eCLIP17.89■□□□□ 0.45
CHRNA1-204ENST00000409323 ABCC4O15439 1325 aa17.89■□□□□ 0.45
CHRNA1-204ENST00000409323 UBN2Q6ZU65 1347 aa17.89■□□□□ 0.45
CHRNA1-204ENST00000409323 BEND3Q5T5X7 828 aa17.88■□□□□ 0.45
CHRNA1-204ENST00000409323 ZNF652Q9Y2D9 606 aa17.88■□□□□ 0.45
CHRNA1-204ENST00000409323 COG6Q9Y2V7 657 aa17.88■□□□□ 0.45
CHRNA1-204ENST00000409323 CASZ1Q86V15 1759 aa17.88■□□□□ 0.45
CHRNA1-204ENST00000409323 NEXNQ0ZGT2 675 aa17.87■□□□□ 0.45
CHRNA1-204ENST00000409323 NFIXQ14938 502 aa17.87■□□□□ 0.45
CHRNA1-204ENST00000409323 ITPRIPQ8IWB1 547 aa17.87■□□□□ 0.45
CHRNA1-204ENST00000409323 CCDC24Q8N4L8 307 aa17.87■□□□□ 0.45
CHRNA1-204ENST00000409323 ATF5Q9Y2D1 282 aaPredicted RBP17.87■□□□□ 0.45
CHRNA1-204ENST00000409323 RNF123Q5XPI4 1314 aa17.87■□□□□ 0.45
CHRNA1-204ENST00000409323 NEURL1BA8MQ27 555 aa17.86■□□□□ 0.45
CHRNA1-204ENST00000409323 ZNF34Q8IZ26 560 aa17.86■□□□□ 0.45
CHRNA1-204ENST00000409323 SYNE4Q8N205 404 aa17.86■□□□□ 0.45
CHRNA1-204ENST00000409323 ISCA1Q9BUE6 129 aa17.86■□□□□ 0.45
CHRNA1-204ENST00000409323 SRCIN1Q9C0H9 1055 aa17.86■□□□□ 0.45
CHRNA1-204ENST00000409323 SUSD4Q5VX71 490 aa17.85■□□□□ 0.45
CHRNA1-204ENST00000409323 CLEC4GQ6UXB4 293 aa17.85■□□□□ 0.45
CHRNA1-204ENST00000409323 ATP10DQ9P241 1426 aa17.85■□□□□ 0.45
CHRNA1-204ENST00000409323 MMP10P09238 476 aa17.84■□□□□ 0.45
CHRNA1-204ENST00000409323 DDR1Q08345 913 aa17.84■□□□□ 0.45
CHRNA1-204ENST00000409323 HSP90AB3PQ58FF7 597 aa17.84■□□□□ 0.45
CHRNA1-204ENST00000409323 NLRP10Q86W26 655 aa17.84■□□□□ 0.45
CHRNA1-204ENST00000409323 NUTM1Q86Y26 1132 aa17.84■□□□□ 0.45
CHRNA1-204ENST00000409323 LINS1Q8NG48 757 aa17.84■□□□□ 0.45
CHRNA1-204ENST00000409323 CRBNQ96SW2 442 aa17.84■□□□□ 0.45
CHRNA1-204ENST00000409323 SETDB2Q96T68 719 aa17.84■□□□□ 0.45
CHRNA1-204ENST00000409323 N4BP2Q86UW6 1770 aaPredicted RBP17.84■□□□□ 0.45
CHRNA1-204ENST00000409323 PXDNLA1KZ92 1463 aa17.83■□□□□ 0.44
CHRNA1-204ENST00000409323 CCT4P50991 539 aaKnown RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms