RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 HMOX1P09601 288 aa17.54■□□□□ 0.4
CHRNA1-203ENST00000409219 MASTLQ96GX5 879 aa17.54■□□□□ 0.4
CHRNA1-203ENST00000409219 HACL1Q9UJ83 578 aa17.54■□□□□ 0.4
CHRNA1-203ENST00000409219 HEG1Q9ULI3 1381 aa17.54■□□□□ 0.4
CHRNA1-203ENST00000409219 MTHFSDQ2M296 383 aaKnown RBP17.53■□□□□ 0.4
CHRNA1-203ENST00000409219 DEFB115Q30KQ5 88 aa17.53■□□□□ 0.4
CHRNA1-203ENST00000409219 TTC5Q8N0Z6 440 aa17.53■□□□□ 0.4
CHRNA1-203ENST00000409219 C7orf43Q8WVR3 580 aa17.53■□□□□ 0.4
CHRNA1-203ENST00000409219 WDR33Q9C0J8 1336 aaKnown RBP17.53■□□□□ 0.4
CHRNA1-203ENST00000409219 NPHP1O15259 732 aa17.52■□□□□ 0.4
CHRNA1-203ENST00000409219 EPHX2P34913 555 aa17.52■□□□□ 0.4
CHRNA1-203ENST00000409219 IL6STP40189 918 aaPredicted RBP17.52■□□□□ 0.4
CHRNA1-203ENST00000409219 ST5P78524 1137 aa17.52■□□□□ 0.4
CHRNA1-203ENST00000409219 MAP2K1Q02750 393 aaPredicted RBP17.52■□□□□ 0.4
CHRNA1-203ENST00000409219 CCDC93Q567U6 631 aa17.52■□□□□ 0.4
CHRNA1-203ENST00000409219 ZNF496Q96IT1 587 aaPredicted RBP17.52■□□□□ 0.4
CHRNA1-203ENST00000409219 SETDB2Q96T68 719 aa17.52■□□□□ 0.4
CHRNA1-203ENST00000409219 CLEC11AQ9Y240 323 aa17.52■□□□□ 0.4
CHRNA1-203ENST00000409219 RNF123Q5XPI4 1314 aa17.52■□□□□ 0.39
CHRNA1-203ENST00000409219 CAMTA2O94983 1202 aa17.51■□□□□ 0.39
CHRNA1-203ENST00000409219 MAP1SQ66K74 1059 aaPredicted RBP17.51■□□□□ 0.39
CHRNA1-203ENST00000409219 CNTROBQ8N137 903 aa17.51■□□□□ 0.39
CHRNA1-203ENST00000409219 FKBP4Q02790 459 aaKnown RBP eCLIP17.5■□□□□ 0.39
CHRNA1-203ENST00000409219 ZNF277Q9NRM2 450 aaPredicted RBP17.5■□□□□ 0.39
CHRNA1-203ENST00000409219 MLLT1Q03111 559 aaPredicted RBP17.5■□□□□ 0.39
CHRNA1-203ENST00000409219 PNMA8AQ86V59 439 aaPredicted RBP17.5■□□□□ 0.39
CHRNA1-203ENST00000409219 LTBP1Q14766 1721 aa17.49■□□□□ 0.39
CHRNA1-203ENST00000409219 ZNF790Q6PG37 636 aa17.49■□□□□ 0.39
CHRNA1-203ENST00000409219 OLFM4Q6UX06 510 aa17.49■□□□□ 0.39
CHRNA1-203ENST00000409219 ABT1Q9ULW3 272 aaKnown RBP17.49■□□□□ 0.39
CHRNA1-203ENST00000409219 A1BGP04217 495 aa17.48■□□□□ 0.39
CHRNA1-203ENST00000409219 RGS19P49795 217 aa17.48■□□□□ 0.39
CHRNA1-203ENST00000409219 TEX13AQ9BXU3 409 aaPredicted RBP17.48■□□□□ 0.39
CHRNA1-203ENST00000409219 PCDH10Q9P2E7 1040 aa17.48■□□□□ 0.39
CHRNA1-203ENST00000409219 CCDC85CA6NKD9 419 aa17.47■□□□□ 0.39
CHRNA1-203ENST00000409219 FZD9O00144 591 aa17.47■□□□□ 0.39
CHRNA1-203ENST00000409219 SNED1Q8TER0 1413 aa17.46■□□□□ 0.39
CHRNA1-203ENST00000409219 TRPM7Q96QT4 1865 aa17.46■□□□□ 0.39
CHRNA1-203ENST00000409219 NPR1P16066 1061 aa17.46■□□□□ 0.39
CHRNA1-203ENST00000409219 DZIP3Q86Y13 1208 aaKnown RBP17.46■□□□□ 0.39
CHRNA1-203ENST00000409219 DDX21Q9NR30 783 aaKnown RBP eCLIP17.46■□□□□ 0.39
CHRNA1-203ENST00000409219 COL4A5P29400 1685 aa17.46■□□□□ 0.39
CHRNA1-203ENST00000409219 IARSP41252 1262 aaKnown RBP17.45■□□□□ 0.38
CHRNA1-203ENST00000409219 NBPF5PQ86XG9 351 aaPredicted RBP17.45■□□□□ 0.38
CHRNA1-203ENST00000409219 KLRG2A4D1S0 409 aaPredicted RBP17.44■□□□□ 0.38
CHRNA1-203ENST00000409219 FMR1Q06787 632 aaKnown RBP eCLIP17.44■□□□□ 0.38
CHRNA1-203ENST00000409219 TEFQ10587 303 aa17.44■□□□□ 0.38
CHRNA1-203ENST00000409219 GPC2Q8N158 579 aa17.44■□□□□ 0.38
CHRNA1-203ENST00000409219 IL17REQ8NFR9 667 aa17.44■□□□□ 0.38
CHRNA1-203ENST00000409219 CAPNS2Q96L46 248 aa17.44■□□□□ 0.38
CHRNA1-203ENST00000409219 NPM2Q86SE8 214 aaKnown RBP17.44■□□□□ 0.38
CHRNA1-203ENST00000409219 FMNL2Q96PY5 1086 aa17.44■□□□□ 0.38
CHRNA1-203ENST00000409219 KNSTRNQ9Y448 316 aa17.44■□□□□ 0.38
CHRNA1-203ENST00000409219 PIP4K2AP48426 406 aaPredicted RBP17.43■□□□□ 0.38
CHRNA1-203ENST00000409219 CYP4F22Q6NT55 531 aa17.43■□□□□ 0.38
CHRNA1-203ENST00000409219 PAXIP1Q6ZW49 1069 aaPredicted RBP17.43■□□□□ 0.38
CHRNA1-203ENST00000409219 RTKN2Q8IZC4 609 aa17.43■□□□□ 0.38
CHRNA1-203ENST00000409219 GRM1Q13255 1194 aa17.42■□□□□ 0.38
CHRNA1-203ENST00000409219 AMER1Q5JTC6 1135 aaPredicted RBP17.42■□□□□ 0.38
CHRNA1-203ENST00000409219 GPR101Q96P66 508 aaPredicted RBP17.42■□□□□ 0.38
CHRNA1-203ENST00000409219 BEGAINQ9BUH8 593 aa17.42■□□□□ 0.38
CHRNA1-203ENST00000409219 TSKSQ9UJT2 592 aa17.42■□□□□ 0.38
CHRNA1-203ENST00000409219 COL3A1P02461 1466 aaPredicted RBP17.41■□□□□ 0.38
CHRNA1-203ENST00000409219 HSPA5P11021 654 aaKnown RBP17.41■□□□□ 0.38
CHRNA1-203ENST00000409219 ECE1P42892 770 aa17.41■□□□□ 0.38
CHRNA1-203ENST00000409219 CLEC4GQ6UXB4 293 aa17.41■□□□□ 0.38
CHRNA1-203ENST00000409219 SYNE4Q8N205 404 aa17.41■□□□□ 0.38
CHRNA1-203ENST00000409219 CEMIPQ8WUJ3 1361 aa17.4■□□□□ 0.38
CHRNA1-203ENST00000409219 GNAT3A8MTJ3 354 aa17.4■□□□□ 0.38
CHRNA1-203ENST00000409219 TNRC18O15417 2968 aaPredicted RBP17.4■□□□□ 0.38
CHRNA1-203ENST00000409219 KCNQ3O43525 872 aa17.4■□□□□ 0.38
CHRNA1-203ENST00000409219 DIAPH1O60610 1272 aaKnown RBP17.4■□□□□ 0.38
CHRNA1-203ENST00000409219 EIF4G2P78344 907 aaKnown RBP eCLIP17.4■□□□□ 0.38
CHRNA1-203ENST00000409219 TIMELESSQ9UNS1 1208 aa17.4■□□□□ 0.38
CHRNA1-203ENST00000409219 SCNN1DP51172 638 aa17.39■□□□□ 0.37
CHRNA1-203ENST00000409219 PSMD1Q99460 953 aa17.39■□□□□ 0.37
CHRNA1-203ENST00000409219 ZNF652Q9Y2D9 606 aa17.39■□□□□ 0.37
CHRNA1-203ENST00000409219 USP16Q9Y5T5 823 aa17.39■□□□□ 0.37
CHRNA1-203ENST00000409219 CASP8AP2Q9UKL3 1982 aa17.39■□□□□ 0.37
CHRNA1-203ENST00000409219 TRAF5O00463 557 aa17.38■□□□□ 0.37
CHRNA1-203ENST00000409219 CST9Q5W186 159 aa17.38■□□□□ 0.37
CHRNA1-203ENST00000409219 JDP2Q8WYK2 163 aa17.38■□□□□ 0.37
CHRNA1-203ENST00000409219 GJA3Q9Y6H8 435 aa17.38■□□□□ 0.37
CHRNA1-203ENST00000409219 TLL2Q9Y6L7 1015 aa17.38■□□□□ 0.37
CHRNA1-203ENST00000409219 PRAMEF22A3QJZ6 481 aa17.37■□□□□ 0.37
CHRNA1-203ENST00000409219 LMOD1P29536 600 aaPredicted RBP17.37■□□□□ 0.37
CHRNA1-203ENST00000409219 EPS15P42566 896 aa17.37■□□□□ 0.37
CHRNA1-203ENST00000409219 TPTE2Q6XPS3 522 aa17.37■□□□□ 0.37
CHRNA1-203ENST00000409219 GAS2L2Q8NHY3 880 aa17.37■□□□□ 0.37
CHRNA1-203ENST00000409219 MCOLN1Q9GZU1 580 aa17.37■□□□□ 0.37
CHRNA1-203ENST00000409219 NIP7Q9Y221 180 aaKnown RBP eCLIP17.37■□□□□ 0.37
CHRNA1-203ENST00000409219 PDE4DIPQ5VU43 2346 aa17.37■□□□□ 0.37
CHRNA1-203ENST00000409219 FAM177BA6PVY3 158 aa17.37■□□□□ 0.37
CHRNA1-203ENST00000409219 AOC2O75106 756 aa17.37■□□□□ 0.37
CHRNA1-203ENST00000409219 ALDH1B1P30837 517 aa17.37■□□□□ 0.37
CHRNA1-203ENST00000409219 EIF6P56537 245 aaKnown RBP17.37■□□□□ 0.37
CHRNA1-203ENST00000409219 ABCC12Q96J65 1359 aa17.36■□□□□ 0.37
CHRNA1-203ENST00000409219 BTBD11A6QL63 1104 aa17.36■□□□□ 0.37
CHRNA1-203ENST00000409219 CFAP44Q96MT7 982 aa17.36■□□□□ 0.37
CHRNA1-203ENST00000409219 MAP2K2P36507 400 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms