RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 ATAD2Q6PL18 1390 aa13.93□□□□□ -0.18
SHANK2-203ENST00000409161 XPCQ01831 940 aaPredicted RBP13.93□□□□□ -0.18
SHANK2-203ENST00000409161 KIF5BP33176 963 aa13.93□□□□□ -0.18
SHANK2-203ENST00000409161 MTIF2P46199 727 aaKnown RBP13.93□□□□□ -0.18
SHANK2-203ENST00000409161 MPNDQ8N594 471 aa13.93□□□□□ -0.18
SHANK2-203ENST00000409161 STRN4Q9NRL3 753 aa13.93□□□□□ -0.18
SHANK2-203ENST00000409161 CFAP65Q6ZU64 1925 aaKnown RBP13.93□□□□□ -0.18
SHANK2-203ENST00000409161 HMG20BQ9P0W2 317 aa13.93□□□□□ -0.18
SHANK2-203ENST00000409161 TIAM1Q13009 1591 aa13.93□□□□□ -0.18
SHANK2-203ENST00000409161 IGHMBP2P38935 993 aaKnown RBP13.93□□□□□ -0.18
SHANK2-203ENST00000409161 CCDC50Q8IVM0 306 aa13.93□□□□□ -0.18
SHANK2-203ENST00000409161 CYLC1P35663 651 aaPredicted RBP13.92□□□□□ -0.18
SHANK2-203ENST00000409161 SSRP1Q08945 709 aaKnown RBP13.92□□□□□ -0.18
SHANK2-203ENST00000409161 SLF2Q8IX21 1173 aa13.92□□□□□ -0.18
SHANK2-203ENST00000409161 BAG4O95429 457 aaKnown RBP13.92□□□□□ -0.18
SHANK2-203ENST00000409161 SIL1Q9H173 461 aa13.92□□□□□ -0.18
SHANK2-203ENST00000409161 SLC12A7Q9Y666 1083 aa13.92□□□□□ -0.18
SHANK2-203ENST00000409161 GGNBP2Q9H3C7 697 aa13.92□□□□□ -0.18
SHANK2-203ENST00000409161 KLHL40Q2TBA0 621 aa13.92□□□□□ -0.18
SHANK2-203ENST00000409161 B4GALNT4Q76KP1 1039 aa13.92□□□□□ -0.18
SHANK2-203ENST00000409161 SH3BGRP55822 239 aaPredicted RBP13.92□□□□□ -0.18
SHANK2-203ENST00000409161 MAP3K9P80192 1104 aa13.92□□□□□ -0.18
SHANK2-203ENST00000409161 MAP4K4O95819 1239 aaPredicted RBP13.92□□□□□ -0.18
SHANK2-203ENST00000409161 GOLGA1Q92805 767 aa13.92□□□□□ -0.18
SHANK2-203ENST00000409161 FANCD2Q9BXW9 1451 aa13.92□□□□□ -0.18
SHANK2-203ENST00000409161 CATIPQ7Z7H3 387 aa13.92□□□□□ -0.18
SHANK2-203ENST00000409161 A0A1B0GUA9 196 aa13.91□□□□□ -0.18
SHANK2-203ENST00000409161 TMCO5BA8MYB1 307 aa13.91□□□□□ -0.18
SHANK2-203ENST00000409161 TMOD2Q9NZR1 351 aa13.91□□□□□ -0.18
SHANK2-203ENST00000409161 SYNJ2O15056 1496 aa13.91□□□□□ -0.18
SHANK2-203ENST00000409161 ALDH3A1P30838 453 aa13.91□□□□□ -0.18
SHANK2-203ENST00000409161 CABP4P57796 275 aa13.91□□□□□ -0.18
SHANK2-203ENST00000409161 MXRA7P84157 204 aa13.91□□□□□ -0.18
SHANK2-203ENST00000409161 CCDC160A6NGH7 325 aa13.91□□□□□ -0.18
SHANK2-203ENST00000409161 ZNF165P49910 485 aa13.91□□□□□ -0.18
SHANK2-203ENST00000409161 NAPBQ9H115 298 aa13.91□□□□□ -0.18
SHANK2-203ENST00000409161 FCHSD2O94868 740 aa13.91□□□□□ -0.18
SHANK2-203ENST00000409161 CCDC129Q6ZRS4 1044 aa13.91□□□□□ -0.18
SHANK2-203ENST00000409161 IFT74Q96LB3 600 aa13.91□□□□□ -0.18
SHANK2-203ENST00000409161 ARFGAP2Q8N6H7 521 aa13.91□□□□□ -0.18
SHANK2-203ENST00000409161 CCDC194A0A1B0GVG4 234 aa13.91□□□□□ -0.18
SHANK2-203ENST00000409161 NOP2P46087 812 aaKnown RBP13.91□□□□□ -0.18
SHANK2-203ENST00000409161 KIAA1524Q8TCG1 905 aa13.91□□□□□ -0.18
SHANK2-203ENST00000409161 LMBR1Q8WVP7 490 aa13.91□□□□□ -0.18
SHANK2-203ENST00000409161 CABP2Q9NPB3 220 aa13.91□□□□□ -0.18
SHANK2-203ENST00000409161 SPAG1Q07617 926 aa13.91□□□□□ -0.18
SHANK2-203ENST00000409161 MAP7D1Q3KQU3 841 aa13.91□□□□□ -0.18
SHANK2-203ENST00000409161 TSGA10Q9BZW7 698 aa13.91□□□□□ -0.18
SHANK2-203ENST00000409161 TACC1O75410 805 aa13.9□□□□□ -0.18
SHANK2-203ENST00000409161 FSIP1Q8NA03 581 aa13.9□□□□□ -0.18
SHANK2-203ENST00000409161 GNG11P61952 73 aa13.9□□□□□ -0.18
SHANK2-203ENST00000409161 HYPKQ9NX55 129 aa13.9□□□□□ -0.18
SHANK2-203ENST00000409161 CTAGE15A4D2H0 777 aa13.9□□□□□ -0.18
SHANK2-203ENST00000409161 CTAGE8P0CG41 777 aa13.9□□□□□ -0.18
SHANK2-203ENST00000409161 CTAGE6Q86UF2 777 aa13.9□□□□□ -0.18
SHANK2-203ENST00000409161 CTAGE4Q8IX94 777 aa13.9□□□□□ -0.18
SHANK2-203ENST00000409161 OTUD6BQ8N6M0 293 aa13.9□□□□□ -0.18
SHANK2-203ENST00000409161 CDCA7LQ96GN5 454 aa13.9□□□□□ -0.18
SHANK2-203ENST00000409161 ZNF652Q9Y2D9 606 aa13.9□□□□□ -0.18
SHANK2-203ENST00000409161 CCDC14Q49A88 953 aa13.9□□□□□ -0.18
SHANK2-203ENST00000409161 ATP5DP30049 168 aa13.9□□□□□ -0.18
SHANK2-203ENST00000409161 ITSN2Q9NZM3 1697 aa13.9□□□□□ -0.18
SHANK2-203ENST00000409161 CLCN1P35523 988 aa13.89□□□□□ -0.19
SHANK2-203ENST00000409161 PRPF4BQ13523 1007 aaKnown RBP13.89□□□□□ -0.19
SHANK2-203ENST00000409161 USP25Q9UHP3 1055 aa13.89□□□□□ -0.19
SHANK2-203ENST00000409161 STX6O43752 255 aa13.89□□□□□ -0.19
SHANK2-203ENST00000409161 TNPO1Q92973 898 aaKnown RBP13.89□□□□□ -0.19
SHANK2-203ENST00000409161 GBP6Q6ZN66 633 aa13.89□□□□□ -0.19
SHANK2-203ENST00000409161 ATP2A2P16615 1042 aaKnown RBP13.89□□□□□ -0.19
SHANK2-203ENST00000409161 CCDC94Q9BW85 323 aaPredicted RBP13.89□□□□□ -0.19
SHANK2-203ENST00000409161 ZHX1Q9UKY1 873 aaPredicted RBP13.89□□□□□ -0.19
SHANK2-203ENST00000409161 BCAR3O75815 825 aa13.89□□□□□ -0.19
SHANK2-203ENST00000409161 RBM5P52756 815 aaKnown RBP eCLIP13.89□□□□□ -0.19
SHANK2-203ENST00000409161 CCDC96Q2M329 555 aa13.89□□□□□ -0.19
SHANK2-203ENST00000409161 C9orf84Q5VXU9 1444 aa13.89□□□□□ -0.19
SHANK2-203ENST00000409161 TRMT1Q9NXH9 659 aaKnown RBP13.89□□□□□ -0.19
SHANK2-203ENST00000409161 LACTBP83111 547 aaPredicted RBP13.88□□□□□ -0.19
SHANK2-203ENST00000409161 ZBTB16Q05516 673 aa13.88□□□□□ -0.19
SHANK2-203ENST00000409161 CCDC102BQ68D86 513 aa13.88□□□□□ -0.19
SHANK2-203ENST00000409161 BTBD11A6QL63 1104 aa13.88□□□□□ -0.19
SHANK2-203ENST00000409161 USP5P45974 858 aa13.88□□□□□ -0.19
SHANK2-203ENST00000409161 CAPN2P17655 700 aa13.88□□□□□ -0.19
SHANK2-203ENST00000409161 MAP3K12Q12852 859 aa13.88□□□□□ -0.19
SHANK2-203ENST00000409161 CCDC40Q4G0X9 1142 aa13.88□□□□□ -0.19
SHANK2-203ENST00000409161 SETDB1Q15047 1291 aa13.88□□□□□ -0.19
SHANK2-203ENST00000409161 DZIP1Q86YF9 867 aaKnown RBP13.88□□□□□ -0.19
SHANK2-203ENST00000409161 PTPRCP08575 1304 aa13.88□□□□□ -0.19
SHANK2-203ENST00000409161 TTF1Q15361 905 aaPredicted RBP13.88□□□□□ -0.19
SHANK2-203ENST00000409161 CAVIN4Q5BKX8 364 aa13.88□□□□□ -0.19
SHANK2-203ENST00000409161 SAMD15Q9P1V8 674 aa13.88□□□□□ -0.19
SHANK2-203ENST00000409161 GOLGA8BA8MQT2 603 aa13.88□□□□□ -0.19
SHANK2-203ENST00000409161 ATP11AP98196 1134 aa13.88□□□□□ -0.19
SHANK2-203ENST00000409161 KCNG4Q8TDN1 519 aa13.88□□□□□ -0.19
SHANK2-203ENST00000409161 LRSAM1Q6UWE0 723 aa13.87□□□□□ -0.19
SHANK2-203ENST00000409161 KRT83P78385 493 aa13.87□□□□□ -0.19
SHANK2-203ENST00000409161 EXOC1Q9NV70 894 aa13.87□□□□□ -0.19
SHANK2-203ENST00000409161 PTPN23Q9H3S7 1636 aa13.87□□□□□ -0.19
SHANK2-203ENST00000409161 TSR2Q969E8 191 aaKnown RBP13.87□□□□□ -0.19
SHANK2-203ENST00000409161 UBA5Q9GZZ9 404 aa13.87□□□□□ -0.19
SHANK2-203ENST00000409161 KRT86O43790 486 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms