RNA–Protein interactions for RNA: ENST00000409047.2

TUBA3D-202, Transcript of tubulin alpha 3d, humanhuman

TSL 2

Gene TUBA3D, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-202ENST00000409047 GAS2L2Q8NHY3 880 aa17.69■□□□□ 0.42
TUBA3D-202ENST00000409047 CREBZFQ9NS37 354 aa17.69■□□□□ 0.42
TUBA3D-202ENST00000409047 ZNF330Q9Y3S2 320 aaPredicted RBP17.69■□□□□ 0.42
TUBA3D-202ENST00000409047 SCN4AP35499 1836 aa17.69■□□□□ 0.42
TUBA3D-202ENST00000409047 PRAMEF22A3QJZ6 481 aa17.68■□□□□ 0.42
TUBA3D-202ENST00000409047 CNKSR1Q969H4 720 aa17.68■□□□□ 0.42
TUBA3D-202ENST00000409047 PHACTR3Q96KR7 559 aa17.68■□□□□ 0.42
TUBA3D-202ENST00000409047 FMNL2Q96PY5 1086 aa17.68■□□□□ 0.42
TUBA3D-202ENST00000409047 SETDB2Q96T68 719 aa17.68■□□□□ 0.42
TUBA3D-202ENST00000409047 USP16Q9Y5T5 823 aa17.68■□□□□ 0.42
TUBA3D-202ENST00000409047 ADAMTSL1Q8N6G6 1762 aa17.68■□□□□ 0.42
TUBA3D-202ENST00000409047 PASKQ96RG2 1323 aa17.68■□□□□ 0.42
TUBA3D-202ENST00000409047 PIP4K2AP48426 406 aaPredicted RBP17.67■□□□□ 0.42
TUBA3D-202ENST00000409047 MASTLQ96GX5 879 aa17.67■□□□□ 0.42
TUBA3D-202ENST00000409047 KLRG2A4D1S0 409 aaPredicted RBP17.66■□□□□ 0.42
TUBA3D-202ENST00000409047 U2SURPO15042 1029 aaKnown RBP17.66■□□□□ 0.42
TUBA3D-202ENST00000409047 DZIP3Q86Y13 1208 aaKnown RBP17.66■□□□□ 0.42
TUBA3D-202ENST00000409047 L3MBTL3Q96JM7 780 aaPredicted RBP17.66■□□□□ 0.42
TUBA3D-202ENST00000409047 MKRN1Q9UHC7 482 aaKnown RBP17.66■□□□□ 0.42
TUBA3D-202ENST00000409047 RSPH6AQ9H0K4 717 aa17.65■□□□□ 0.42
TUBA3D-202ENST00000409047 CNTNAP1P78357 1384 aa17.65■□□□□ 0.42
TUBA3D-202ENST00000409047 BTBD11A6QL63 1104 aa17.64■□□□□ 0.41
TUBA3D-202ENST00000409047 ST5P78524 1137 aa17.64■□□□□ 0.41
TUBA3D-202ENST00000409047 OLFM4Q6UX06 510 aa17.64■□□□□ 0.41
TUBA3D-202ENST00000409047 TAF1DQ9H5J8 278 aaPredicted RBP17.64■□□□□ 0.41
TUBA3D-202ENST00000409047 SNED1Q8TER0 1413 aa17.64■□□□□ 0.41
TUBA3D-202ENST00000409047 ITGBL1O95965 494 aaPredicted RBP17.63■□□□□ 0.41
TUBA3D-202ENST00000409047 CLEC4GQ6UXB4 293 aa17.63■□□□□ 0.41
TUBA3D-202ENST00000409047 ZNF541Q9H0D2 1346 aa17.63■□□□□ 0.41
TUBA3D-202ENST00000409047 NBPF26B4DH59 902 aa17.62■□□□□ 0.41
TUBA3D-202ENST00000409047 FOXN1O15353 648 aa17.62■□□□□ 0.41
TUBA3D-202ENST00000409047 PRKAR2BP31323 418 aa17.62■□□□□ 0.41
TUBA3D-202ENST00000409047 SOGA3Q5TF21 947 aa17.62■□□□□ 0.41
TUBA3D-202ENST00000409047 NBPF10Q6P3W6 841 aaKnown RBP17.62■□□□□ 0.41
TUBA3D-202ENST00000409047 LDHDQ86WU2 507 aa17.62■□□□□ 0.41
TUBA3D-202ENST00000409047 NBPF15Q8N660 670 aa17.62■□□□□ 0.41
TUBA3D-202ENST00000409047 IQCA1LA6NCM1 817 aa17.6■□□□□ 0.41
TUBA3D-202ENST00000409047 NPR1P16066 1061 aa17.6■□□□□ 0.41
TUBA3D-202ENST00000409047 FKBP4Q02790 459 aaKnown RBP eCLIP17.6■□□□□ 0.41
TUBA3D-202ENST00000409047 CCDC93Q567U6 631 aa17.6■□□□□ 0.41
TUBA3D-202ENST00000409047 NBPF5PQ86XG9 351 aaPredicted RBP17.6■□□□□ 0.41
TUBA3D-202ENST00000409047 ZNF277Q9NRM2 450 aaPredicted RBP17.6■□□□□ 0.41
TUBA3D-202ENST00000409047 COL4A5P29400 1685 aa17.6■□□□□ 0.41
TUBA3D-202ENST00000409047 CNGB1Q14028 1251 aaPredicted RBP17.59■□□□□ 0.41
TUBA3D-202ENST00000409047 CCER1Q8TC90 406 aaPredicted RBP17.59■□□□□ 0.41
TUBA3D-202ENST00000409047 RGL2O15211 777 aa17.58■□□□□ 0.4
TUBA3D-202ENST00000409047 NPHP1O15259 732 aa17.58■□□□□ 0.4
TUBA3D-202ENST00000409047 SNRPA1P09661 255 aaKnown RBP17.58■□□□□ 0.4
TUBA3D-202ENST00000409047 VEGFBP49765 207 aa17.58■□□□□ 0.4
TUBA3D-202ENST00000409047 MCM10Q7L590 875 aa17.58■□□□□ 0.4
TUBA3D-202ENST00000409047 LAMB4A4D0S4 1761 aa17.58■□□□□ 0.4
TUBA3D-202ENST00000409047 LTBP1Q14766 1721 aa17.58■□□□□ 0.4
TUBA3D-202ENST00000409047 FZD9O00144 591 aa17.57■□□□□ 0.4
TUBA3D-202ENST00000409047 HLFQ16534 295 aa17.57■□□□□ 0.4
TUBA3D-202ENST00000409047 NPM2Q86SE8 214 aaKnown RBP17.57■□□□□ 0.4
TUBA3D-202ENST00000409047 PRDM10Q9NQV6 1147 aa17.57■□□□□ 0.4
TUBA3D-202ENST00000409047 NUP98P52948 1817 aa17.56■□□□□ 0.4
TUBA3D-202ENST00000409047 DCTN1Q14203 1278 aa17.56■□□□□ 0.4
TUBA3D-202ENST00000409047 NIP7Q9Y221 180 aaKnown RBP eCLIP17.56■□□□□ 0.4
TUBA3D-202ENST00000409047 ABCC12Q96J65 1359 aa17.55■□□□□ 0.4
TUBA3D-202ENST00000409047 TMEM88BA6NKF7 163 aa17.55■□□□□ 0.4
TUBA3D-202ENST00000409047 TPTE2Q6XPS3 522 aa17.55■□□□□ 0.4
TUBA3D-202ENST00000409047 WBP1LQ9NX94 342 aa17.55■□□□□ 0.4
TUBA3D-202ENST00000409047 ZNF652Q9Y2D9 606 aa17.55■□□□□ 0.4
TUBA3D-202ENST00000409047 RNF123Q5XPI4 1314 aa17.54■□□□□ 0.4
TUBA3D-202ENST00000409047 EPHX2P34913 555 aa17.54■□□□□ 0.4
TUBA3D-202ENST00000409047 IARSP41252 1262 aaKnown RBP17.54■□□□□ 0.4
TUBA3D-202ENST00000409047 CRY2Q49AN0 593 aa17.54■□□□□ 0.4
TUBA3D-202ENST00000409047 SLC51AQ86UW1 340 aa17.54■□□□□ 0.4
TUBA3D-202ENST00000409047 RTKN2Q8IZC4 609 aa17.54■□□□□ 0.4
TUBA3D-202ENST00000409047 HACL1Q9UJ83 578 aa17.54■□□□□ 0.4
TUBA3D-202ENST00000409047 DLG5Q8TDM6 1919 aa17.54■□□□□ 0.4
TUBA3D-202ENST00000409047 KDM3BQ7LBC6 1761 aa17.53■□□□□ 0.4
TUBA3D-202ENST00000409047 RASSF10A6NK89 507 aa17.53■□□□□ 0.4
TUBA3D-202ENST00000409047 FAM177BA6PVY3 158 aa17.53■□□□□ 0.4
TUBA3D-202ENST00000409047 EAPPQ56P03 285 aaPredicted RBP17.53■□□□□ 0.4
TUBA3D-202ENST00000409047 MAP1SQ66K74 1059 aaPredicted RBP17.53■□□□□ 0.4
TUBA3D-202ENST00000409047 SYNE4Q8N205 404 aa17.53■□□□□ 0.4
TUBA3D-202ENST00000409047 THSD7BQ9C0I4 1608 aa17.51■□□□□ 0.39
TUBA3D-202ENST00000409047 CTCFP49711 727 aaPredicted RBP17.51■□□□□ 0.39
TUBA3D-202ENST00000409047 CNTROBQ8N137 903 aa17.51■□□□□ 0.39
TUBA3D-202ENST00000409047 PSMD1Q99460 953 aa17.51■□□□□ 0.39
TUBA3D-202ENST00000409047 MIS18AQ9NYP9 233 aa17.51■□□□□ 0.39
TUBA3D-202ENST00000409047 HTATSF1O43719 755 aaKnown RBP17.5■□□□□ 0.39
TUBA3D-202ENST00000409047 U2AF1L5P0DN76 240 aaPredicted RBP17.5■□□□□ 0.39
TUBA3D-202ENST00000409047 PPP2R1AP30153 589 aa17.5■□□□□ 0.39
TUBA3D-202ENST00000409047 ALDH1B1P30837 517 aa17.5■□□□□ 0.39
TUBA3D-202ENST00000409047 U2AF1Q01081 240 aaKnown RBP eCLIP17.5■□□□□ 0.39
TUBA3D-202ENST00000409047 NUTM1Q86Y26 1132 aa17.5■□□□□ 0.39
TUBA3D-202ENST00000409047 GPC2Q8N158 579 aa17.5■□□□□ 0.39
TUBA3D-202ENST00000409047 RIC1Q4ADV7 1423 aa17.49■□□□□ 0.39
TUBA3D-202ENST00000409047 LBX1P52954 281 aa17.49■□□□□ 0.39
TUBA3D-202ENST00000409047 FMR1Q06787 632 aaKnown RBP eCLIP17.49■□□□□ 0.39
TUBA3D-202ENST00000409047 PNMA8AQ86V59 439 aaPredicted RBP17.49■□□□□ 0.39
TUBA3D-202ENST00000409047 RTF1Q92541 710 aaKnown RBP17.49■□□□□ 0.39
TUBA3D-202ENST00000409047 CFAP53Q96M91 514 aa17.49■□□□□ 0.39
TUBA3D-202ENST00000409047 UBN2Q6ZU65 1347 aa17.48■□□□□ 0.39
TUBA3D-202ENST00000409047 HSPA8P11142 646 aaKnown RBP17.48■□□□□ 0.39
TUBA3D-202ENST00000409047 SCNN1DP51172 638 aa17.48■□□□□ 0.39
TUBA3D-202ENST00000409047 TAF7Q15545 349 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms