RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 ANTXR1Q9H6X2 564 aa20.43■□□□□ 0.86
SMPD4-202ENST00000409031 MBIPQ9NS73 344 aa20.43■□□□□ 0.86
SMPD4-202ENST00000409031 STK11IPQ8N1F8 1099 aa20.42■□□□□ 0.86
SMPD4-202ENST00000409031 RAPGEF4Q8WZA2 1011 aa20.42■□□□□ 0.86
SMPD4-202ENST00000409031 CDK5RAP3Q96JB5 506 aa20.42■□□□□ 0.86
SMPD4-202ENST00000409031 BOLA2Q9H3K6 86 aa20.42■□□□□ 0.86
SMPD4-202ENST00000409031 DNAJC5BQ9UF47 199 aa20.42■□□□□ 0.86
SMPD4-202ENST00000409031 ZSCAN25Q6NSZ9 544 aa20.42■□□□□ 0.86
SMPD4-202ENST00000409031 VGLL3A8MV65 326 aa20.42■□□□□ 0.86
SMPD4-202ENST00000409031 TESK2Q96S53 571 aa20.42■□□□□ 0.86
SMPD4-202ENST00000409031 VPS18Q9P253 973 aa20.42■□□□□ 0.86
SMPD4-202ENST00000409031 TSHZ3Q63HK5 1081 aa20.42■□□□□ 0.86
SMPD4-202ENST00000409031 MCM10Q7L590 875 aa20.42■□□□□ 0.86
SMPD4-202ENST00000409031 NUP88Q99567 741 aaPredicted RBP20.42■□□□□ 0.86
SMPD4-202ENST00000409031 NECAB1Q8N987 351 aa20.41■□□□□ 0.86
SMPD4-202ENST00000409031 RRS1Q15050 365 aaKnown RBP20.41■□□□□ 0.86
SMPD4-202ENST00000409031 VPS37DQ86XT2 251 aa20.41■□□□□ 0.86
SMPD4-202ENST00000409031 CCDC102BQ68D86 513 aa20.41■□□□□ 0.86
SMPD4-202ENST00000409031 C16orf71Q8IYS4 520 aaPredicted RBP20.41■□□□□ 0.86
SMPD4-202ENST00000409031 MRPL50Q8N5N7 158 aaKnown RBP20.41■□□□□ 0.86
SMPD4-202ENST00000409031 MRPS27Q92552 414 aaKnown RBP20.41■□□□□ 0.86
SMPD4-202ENST00000409031 EHBP1Q8NDI1 1231 aa20.4■□□□□ 0.86
SMPD4-202ENST00000409031 TSC1Q92574 1164 aa20.4■□□□□ 0.86
SMPD4-202ENST00000409031 NACAP1Q9BZK3 213 aa20.4■□□□□ 0.86
SMPD4-202ENST00000409031 CKAP4Q07065 602 aaKnown RBP20.4■□□□□ 0.86
SMPD4-202ENST00000409031 TICAM2Q86XR7 235 aa20.4■□□□□ 0.86
SMPD4-202ENST00000409031 TANGO6Q9C0B7 1094 aa20.4■□□□□ 0.86
SMPD4-202ENST00000409031 IBTKQ9P2D0 1353 aaPredicted RBP20.4■□□□□ 0.86
SMPD4-202ENST00000409031 NAA15Q9BXJ9 866 aaKnown RBP20.39■□□□□ 0.86
SMPD4-202ENST00000409031 PIP4K2BP78356 416 aa20.39■□□□□ 0.85
SMPD4-202ENST00000409031 DHX37Q8IY37 1157 aaKnown RBP20.39■□□□□ 0.85
SMPD4-202ENST00000409031 NEK1Q96PY6 1258 aa20.39■□□□□ 0.85
SMPD4-202ENST00000409031 ENOX2Q16206 610 aaKnown RBP20.39■□□□□ 0.85
SMPD4-202ENST00000409031 NUP160Q12769 1436 aa20.39■□□□□ 0.85
SMPD4-202ENST00000409031 BLMP54132 1417 aaPredicted RBP20.38■□□□□ 0.85
SMPD4-202ENST00000409031 KCNG4Q8TDN1 519 aa20.38■□□□□ 0.85
SMPD4-202ENST00000409031 ELF2Q15723 593 aa20.38■□□□□ 0.85
SMPD4-202ENST00000409031 GOLGA6L10A0A0M3HER8 536 aa20.38■□□□□ 0.85
SMPD4-202ENST00000409031 MAP2K1Q02750 393 aaPredicted RBP20.38■□□□□ 0.85
SMPD4-202ENST00000409031 HDXQ7Z353 690 aa20.38■□□□□ 0.85
SMPD4-202ENST00000409031 MEIS3Q99687 375 aa20.38■□□□□ 0.85
SMPD4-202ENST00000409031 EVCP57679 992 aa20.38■□□□□ 0.85
SMPD4-202ENST00000409031 FLIIQ13045 1269 aa20.38■□□□□ 0.85
SMPD4-202ENST00000409031 SLC52A1Q9NWF4 448 aa20.38■□□□□ 0.85
SMPD4-202ENST00000409031 PRAG1Q86YV5 1406 aa20.38■□□□□ 0.85
SMPD4-202ENST00000409031 CCDC175P0C221 793 aa20.37■□□□□ 0.85
SMPD4-202ENST00000409031 LIG1P18858 919 aa20.37■□□□□ 0.85
SMPD4-202ENST00000409031 MIS18AQ9NYP9 233 aa20.37■□□□□ 0.85
SMPD4-202ENST00000409031 RTEL1-TNFRSF6BF6WH68 1400 aa20.37■□□□□ 0.85
SMPD4-202ENST00000409031 GBP2P32456 591 aaPredicted RBP20.37■□□□□ 0.85
SMPD4-202ENST00000409031 HSPA4P34932 840 aa20.37■□□□□ 0.85
SMPD4-202ENST00000409031 AK2P54819 239 aa20.37■□□□□ 0.85
SMPD4-202ENST00000409031 SLC26A8Q96RN1 970 aa20.37■□□□□ 0.85
SMPD4-202ENST00000409031 KANK3Q6NY19 840 aa20.36■□□□□ 0.85
SMPD4-202ENST00000409031 OPA1O60313 960 aa20.36■□□□□ 0.85
SMPD4-202ENST00000409031 CCT2P78371 535 aaKnown RBP20.36■□□□□ 0.85
SMPD4-202ENST00000409031 NEFHP12036 1026 aa20.36■□□□□ 0.85
SMPD4-202ENST00000409031 FKBP4Q02790 459 aaKnown RBP eCLIP20.36■□□□□ 0.85
SMPD4-202ENST00000409031 TOPBP1Q92547 1522 aa20.36■□□□□ 0.85
SMPD4-202ENST00000409031 HSF2BPO75031 334 aa20.36■□□□□ 0.85
SMPD4-202ENST00000409031 ZNF75DP51815 510 aa20.36■□□□□ 0.85
SMPD4-202ENST00000409031 CCDC57Q2TAC2 916 aa20.36■□□□□ 0.85
SMPD4-202ENST00000409031 MRC2Q9UBG0 1479 aa20.35■□□□□ 0.85
SMPD4-202ENST00000409031 SYKP43405 635 aa20.35■□□□□ 0.85
SMPD4-202ENST00000409031 FKBP15Q5T1M5 1219 aa20.35■□□□□ 0.85
SMPD4-202ENST00000409031 NUP133Q8WUM0 1156 aa20.35■□□□□ 0.85
SMPD4-202ENST00000409031 EZRP15311 586 aaKnown RBP20.35■□□□□ 0.85
SMPD4-202ENST00000409031 OTUD6BQ8N6M0 293 aa20.35■□□□□ 0.85
SMPD4-202ENST00000409031 CEP126Q9P2H0 1117 aa20.35■□□□□ 0.85
SMPD4-202ENST00000409031 CTAGE9A4FU28 777 aa20.35■□□□□ 0.85
SMPD4-202ENST00000409031 GNAT3A8MTJ3 354 aa20.35■□□□□ 0.85
SMPD4-202ENST00000409031 CYB5RLQ6IPT4 315 aa20.35■□□□□ 0.85
SMPD4-202ENST00000409031 RHPN1Q8TCX5 695 aa20.35■□□□□ 0.85
SMPD4-202ENST00000409031 PSME1Q06323 249 aa20.35■□□□□ 0.85
SMPD4-202ENST00000409031 PPM1EQ8WY54 764 aa20.35■□□□□ 0.85
SMPD4-202ENST00000409031 PHAXQ9H814 394 aaKnown RBP20.35■□□□□ 0.85
SMPD4-202ENST00000409031 IFFO1Q0D2I5 559 aa20.34■□□□□ 0.85
SMPD4-202ENST00000409031 ABCA10Q8WWZ4 1543 aa20.34■□□□□ 0.85
SMPD4-202ENST00000409031 SEPT7Q16181 437 aaKnown RBP20.34■□□□□ 0.85
SMPD4-202ENST00000409031 ALS2CR12Q96Q35 445 aa20.34■□□□□ 0.85
SMPD4-202ENST00000409031 BRD1O95696 1058 aa20.34■□□□□ 0.85
SMPD4-202ENST00000409031 ZBTB7BO15156 539 aaPredicted RBP20.33■□□□□ 0.85
SMPD4-202ENST00000409031 LMOD1P29536 600 aaPredicted RBP20.33■□□□□ 0.85
SMPD4-202ENST00000409031 ISM2Q6H9L7 571 aa20.33■□□□□ 0.85
SMPD4-202ENST00000409031 ANKRD36BQ8N2N9 1353 aa20.33■□□□□ 0.85
SMPD4-202ENST00000409031 TAF7Q15545 349 aaPredicted RBP20.33■□□□□ 0.85
SMPD4-202ENST00000409031 IFNKQ9P0W0 207 aa20.33■□□□□ 0.85
SMPD4-202ENST00000409031 GBP6Q6ZN66 633 aa20.33■□□□□ 0.84
SMPD4-202ENST00000409031 PPP1R42Q7Z4L9 355 aa20.33■□□□□ 0.84
SMPD4-202ENST00000409031 CCDC8Q9H0W5 538 aaPredicted RBP20.33■□□□□ 0.84
SMPD4-202ENST00000409031 ORC3Q9UBD5 711 aaPredicted RBP20.33■□□□□ 0.84
SMPD4-202ENST00000409031 TDO2P48775 406 aa20.32■□□□□ 0.84
SMPD4-202ENST00000409031 ZFYVE27Q5T4F4 411 aa20.32■□□□□ 0.84
SMPD4-202ENST00000409031 CHMLP26374 656 aa20.32■□□□□ 0.84
SMPD4-202ENST00000409031 NCBP3Q53F19 620 aaKnown RBP20.32■□□□□ 0.84
SMPD4-202ENST00000409031 RBM8AQ9Y5S9 174 aaKnown RBP20.32■□□□□ 0.84
SMPD4-202ENST00000409031 CCDC196A0A1B0GTZ2 297 aa20.32■□□□□ 0.84
SMPD4-202ENST00000409031 PPP2R3AQ06190 1150 aa20.32■□□□□ 0.84
SMPD4-202ENST00000409031 SYCP1Q15431 976 aa20.32■□□□□ 0.84
SMPD4-202ENST00000409031 SPECC1Q5M775 1068 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms