RNA–Protein interactions for RNA: ENST00000407925.5

LTBP1-204, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP1, Length 5,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-204ENST00000407925 NUTM2EB1AL46 878 aaPredicted RBP12.39□□□□□ -0.43
LTBP1-204ENST00000407925 IFIT3O14879 490 aaKnown RBP12.39□□□□□ -0.43
LTBP1-204ENST00000407925 MTIF2P46199 727 aaKnown RBP12.39□□□□□ -0.43
LTBP1-204ENST00000407925 NUTM2AQ8IVF1 878 aaPredicted RBP12.39□□□□□ -0.43
LTBP1-204ENST00000407925 SREK1Q8WXA9 508 aaKnown RBP12.39□□□□□ -0.43
LTBP1-204ENST00000407925 TSNARE1Q96NA8 513 aa12.38□□□□□ -0.43
LTBP1-204ENST00000407925 SPAG1Q07617 926 aa12.38□□□□□ -0.43
LTBP1-204ENST00000407925 KLHL10Q6JEL2 608 aa12.38□□□□□ -0.43
LTBP1-204ENST00000407925 SMARCC1Q92922 1105 aaPredicted RBP12.38□□□□□ -0.43
LTBP1-204ENST00000407925 ZSCAN16Q9H4T2 348 aaPredicted RBP12.38□□□□□ -0.43
LTBP1-204ENST00000407925 NKTRP30414 1462 aaKnown RBP12.38□□□□□ -0.43
LTBP1-204ENST00000407925 RANBP6O60518 1105 aaKnown RBP12.38□□□□□ -0.43
LTBP1-204ENST00000407925 NBPF7P0C2Y1 421 aaPredicted RBP12.38□□□□□ -0.43
LTBP1-204ENST00000407925 RRS1Q15050 365 aaKnown RBP12.38□□□□□ -0.43
LTBP1-204ENST00000407925 FERMT3Q86UX7 667 aa12.38□□□□□ -0.43
LTBP1-204ENST00000407925 ECHDC1Q9NTX5 307 aa12.38□□□□□ -0.43
LTBP1-204ENST00000407925 PABPN1LA6NDY0 278 aaKnown RBP12.38□□□□□ -0.43
LTBP1-204ENST00000407925 FERP16591 822 aa12.38□□□□□ -0.43
LTBP1-204ENST00000407925 PRPHP41219 470 aa12.38□□□□□ -0.43
LTBP1-204ENST00000407925 UBA5Q9GZZ9 404 aa12.38□□□□□ -0.43
LTBP1-204ENST00000407925 IARSP41252 1262 aaKnown RBP12.37□□□□□ -0.43
LTBP1-204ENST00000407925 TUBB4BP68371 445 aa12.37□□□□□ -0.43
LTBP1-204ENST00000407925 CCDC40Q4G0X9 1142 aa12.37□□□□□ -0.43
LTBP1-204ENST00000407925 SPATA24Q86W54 205 aa12.37□□□□□ -0.43
LTBP1-204ENST00000407925 ANKIB1Q9P2G1 1089 aa12.37□□□□□ -0.43
LTBP1-204ENST00000407925 ERMNQ8TAM6 284 aa12.37□□□□□ -0.43
LTBP1-204ENST00000407925 CABP5Q9NP86 173 aa12.37□□□□□ -0.43
LTBP1-204ENST00000407925 UQCRFS1P1P0C7P4 283 aa12.37□□□□□ -0.43
LTBP1-204ENST00000407925 UBA7P41226 1012 aa12.37□□□□□ -0.43
LTBP1-204ENST00000407925 CKAP4Q07065 602 aaKnown RBP12.37□□□□□ -0.43
LTBP1-204ENST00000407925 TMTC2Q8N394 836 aa12.37□□□□□ -0.43
LTBP1-204ENST00000407925 MYD88Q99836 296 aa12.37□□□□□ -0.43
LTBP1-204ENST00000407925 BOLA2Q9H3K6 86 aa12.37□□□□□ -0.43
LTBP1-204ENST00000407925 HLA-DOAP06340 250 aa12.37□□□□□ -0.43
LTBP1-204ENST00000407925 NBPF8Q3BBV2 869 aa12.37□□□□□ -0.43
LTBP1-204ENST00000407925 FSIP1Q8NA03 581 aa12.37□□□□□ -0.43
LTBP1-204ENST00000407925 RPGRQ92834 1020 aaKnown RBP12.37□□□□□ -0.43
LTBP1-204ENST00000407925 RARSP54136 660 aaKnown RBP12.36□□□□□ -0.43
LTBP1-204ENST00000407925 GSTO1P78417 241 aa12.36□□□□□ -0.43
LTBP1-204ENST00000407925 CCDC102BQ68D86 513 aa12.36□□□□□ -0.43
LTBP1-204ENST00000407925 CTNNBL1Q8WYA6 563 aaPredicted RBP12.36□□□□□ -0.43
LTBP1-204ENST00000407925 CEP63Q96MT8 703 aa12.36□□□□□ -0.43
LTBP1-204ENST00000407925 CTAGE1Q96RT6 745 aa12.36□□□□□ -0.43
LTBP1-204ENST00000407925 TRMT112Q9UI30 125 aaKnown RBP12.36□□□□□ -0.43
LTBP1-204ENST00000407925 CAMK4Q16566 473 aa12.36□□□□□ -0.43
LTBP1-204ENST00000407925 BICDL1Q6ZP65 573 aa12.36□□□□□ -0.43
LTBP1-204ENST00000407925 ZFYP08048 801 aaPredicted RBP12.36□□□□□ -0.43
LTBP1-204ENST00000407925 HOMER2Q9NSB8 354 aa12.36□□□□□ -0.43
LTBP1-204ENST00000407925 TNNT1P13805 278 aa12.35□□□□□ -0.43
LTBP1-204ENST00000407925 PIBF1Q8WXW3 757 aa12.35□□□□□ -0.43
LTBP1-204ENST00000407925 PAXBP1Q9Y5B6 917 aa12.35□□□□□ -0.43
LTBP1-204ENST00000407925 IL16Q14005 1332 aa12.35□□□□□ -0.43
LTBP1-204ENST00000407925 EPRSP07814 1512 aaKnown RBP12.35□□□□□ -0.43
LTBP1-204ENST00000407925 CEP112Q8N8E3 955 aa12.35□□□□□ -0.43
LTBP1-204ENST00000407925 TTC12Q9H892 705 aaPredicted RBP12.35□□□□□ -0.43
LTBP1-204ENST00000407925 GOPCQ9HD26 462 aa12.35□□□□□ -0.43
LTBP1-204ENST00000407925 GNAQP50148 359 aa12.35□□□□□ -0.43
LTBP1-204ENST00000407925 BMP2KLQ5H9B9 411 aa12.35□□□□□ -0.43
LTBP1-204ENST00000407925 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.35□□□□□ -0.436e-6■■□□□ 13.3
LTBP1-204ENST00000407925 PRKCSHP14314 528 aaPredicted RBP12.35□□□□□ -0.43
LTBP1-204ENST00000407925 HLTFQ14527 1009 aaKnown RBP eCLIP12.35□□□□□ -0.43
LTBP1-204ENST00000407925 CCDC174Q6PII3 467 aa12.35□□□□□ -0.43
LTBP1-204ENST00000407925 NCOA7Q8NI08 942 aa12.35□□□□□ -0.43
LTBP1-204ENST00000407925 RBM27Q9P2N5 1060 aaKnown RBP12.35□□□□□ -0.43
LTBP1-204ENST00000407925 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.34□□□□□ -0.43
LTBP1-204ENST00000407925 SSH1Q8WYL5 1049 aa12.34□□□□□ -0.43
LTBP1-204ENST00000407925 KAT14Q9H8E8 782 aa12.34□□□□□ -0.43
LTBP1-204ENST00000407925 IKBKGQ9Y6K9 419 aa12.34□□□□□ -0.43
LTBP1-204ENST00000407925 CCDC171Q6TFL3 1326 aa12.34□□□□□ -0.43
LTBP1-204ENST00000407925 UBE2HP62256 183 aa12.34□□□□□ -0.43
LTBP1-204ENST00000407925 BMS1Q14692 1282 aaKnown RBP12.34□□□□□ -0.43
LTBP1-204ENST00000407925 PPP1R42Q7Z4L9 355 aa12.34□□□□□ -0.43
LTBP1-204ENST00000407925 CCDC155Q8N6L0 562 aa12.34□□□□□ -0.43
LTBP1-204ENST00000407925 TMEM87AQ8NBN3 555 aa12.34□□□□□ -0.43
LTBP1-204ENST00000407925 PRIMPOLQ96LW4 560 aa12.34□□□□□ -0.43
LTBP1-204ENST00000407925 STX6O43752 255 aa12.34□□□□□ -0.43
LTBP1-204ENST00000407925 ZC3H6P61129 1189 aaKnown RBP12.34□□□□□ -0.43
LTBP1-204ENST00000407925 TMCO5BA8MYB1 307 aa12.33□□□□□ -0.44
LTBP1-204ENST00000407925 TBCAO75347 108 aaKnown RBP12.33□□□□□ -0.44
LTBP1-204ENST00000407925 ZGPATQ8N5A5 531 aaKnown RBP12.33□□□□□ -0.44
LTBP1-204ENST00000407925 STMN4Q9H169 189 aaPredicted RBP12.33□□□□□ -0.44
LTBP1-204ENST00000407925 SSX2IPQ9Y2D8 614 aa12.33□□□□□ -0.44
LTBP1-204ENST00000407925 COMMD10Q9Y6G5 202 aa12.33□□□□□ -0.44
LTBP1-204ENST00000407925 PIK3R4Q99570 1358 aa12.33□□□□□ -0.44
LTBP1-204ENST00000407925 MRC2Q9UBG0 1479 aa12.33□□□□□ -0.44
LTBP1-204ENST00000407925 TBC1D5Q92609 795 aa12.33□□□□□ -0.44
LTBP1-204ENST00000407925 USP16Q9Y5T5 823 aa12.33□□□□□ -0.44
LTBP1-204ENST00000407925 CYLC1P35663 651 aaPredicted RBP12.33□□□□□ -0.44
LTBP1-204ENST00000407925 KIAA0753Q2KHM9 967 aa12.33□□□□□ -0.44
LTBP1-204ENST00000407925 CTR9Q6PD62 1173 aa12.33□□□□□ -0.44
LTBP1-204ENST00000407925 MACROD2A1Z1Q3 448 aa12.33□□□□□ -0.44
LTBP1-204ENST00000407925 TMEM67Q5HYA8 995 aa12.33□□□□□ -0.44
LTBP1-204ENST00000407925 MFSD6Q6ZSS7 791 aa12.33□□□□□ -0.44
LTBP1-204ENST00000407925 DRC1Q96MC2 740 aa12.33□□□□□ -0.44
LTBP1-204ENST00000407925 CCDC77Q9BR77 488 aa12.33□□□□□ -0.44
LTBP1-204ENST00000407925 CNNM2Q9H8M5 875 aa12.33□□□□□ -0.44
LTBP1-204ENST00000407925 FMNL3Q8IVF7 1028 aa12.32□□□□□ -0.44
LTBP1-204ENST00000407925 MPNDQ8N594 471 aa12.32□□□□□ -0.44
LTBP1-204ENST00000407925 KRT23Q9C075 422 aa12.32□□□□□ -0.44
LTBP1-204ENST00000407925 NSRP1Q9H0G5 558 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms