RNA–Protein interactions for RNA: ENST00000407089.2

SPTLC1P2-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 2, humanhuman

BASIC

Gene SPTLC1P2, Length 121 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P2-201ENST00000407089 ZIC5Q96T25 663 aa7.48□□□□□ -1.21
SPTLC1P2-201ENST00000407089 CARD11Q9BXL7 1154 aa7.48□□□□□ -1.21
SPTLC1P2-201ENST00000407089 COL15A1P39059 1388 aa7.47□□□□□ -1.21
SPTLC1P2-201ENST00000407089 EPS15P42566 896 aa7.47□□□□□ -1.21
SPTLC1P2-201ENST00000407089 FKBP4Q02790 459 aaKnown RBP eCLIP7.47□□□□□ -1.21
SPTLC1P2-201ENST00000407089 PLEKHO1Q53GL0 409 aaPredicted RBP7.47□□□□□ -1.21
SPTLC1P2-201ENST00000407089 TBC1D9BQ66K14 1250 aa7.47□□□□□ -1.21
SPTLC1P2-201ENST00000407089 HHIPL1Q96JK4 782 aa7.47□□□□□ -1.21
SPTLC1P2-201ENST00000407089 SLX4Q8IY92 1834 aa7.47□□□□□ -1.21
SPTLC1P2-201ENST00000407089 TJP1Q07157 1748 aa7.47□□□□□ -1.21
SPTLC1P2-201ENST00000407089 CELF2O95319 508 aaKnown RBP7.46□□□□□ -1.22
SPTLC1P2-201ENST00000407089 CCDC93Q567U6 631 aa7.46□□□□□ -1.22
SPTLC1P2-201ENST00000407089 ZNF530Q6P9A1 599 aaPredicted RBP7.46□□□□□ -1.22
SPTLC1P2-201ENST00000407089 MASTLQ96GX5 879 aa7.46□□□□□ -1.22
SPTLC1P2-201ENST00000407089 TESK2Q96S53 571 aa7.46□□□□□ -1.22
SPTLC1P2-201ENST00000407089 ZBTB1Q9Y2K1 713 aa7.46□□□□□ -1.22
SPTLC1P2-201ENST00000407089 ANKRD31Q8N7Z5 1873 aa7.46□□□□□ -1.22
SPTLC1P2-201ENST00000407089 DLL1O00548 723 aa7.45□□□□□ -1.22
SPTLC1P2-201ENST00000407089 CANXP27824 592 aaKnown RBP7.45□□□□□ -1.22
SPTLC1P2-201ENST00000407089 LMOD1P29536 600 aaPredicted RBP7.45□□□□□ -1.22
SPTLC1P2-201ENST00000407089 IARSP41252 1262 aaKnown RBP7.45□□□□□ -1.22
SPTLC1P2-201ENST00000407089 FXR1P51114 621 aaKnown RBP eCLIP7.45□□□□□ -1.22
SPTLC1P2-201ENST00000407089 NOGQ13253 232 aa7.45□□□□□ -1.22
SPTLC1P2-201ENST00000407089 AMOTQ4VCS5 1084 aa7.45□□□□□ -1.22
SPTLC1P2-201ENST00000407089 OLFM4Q6UX06 510 aa7.45□□□□□ -1.22
SPTLC1P2-201ENST00000407089 USP50Q70EL3 339 aaPredicted RBP7.45□□□□□ -1.22
SPTLC1P2-201ENST00000407089 SYNE4Q8N205 404 aa7.45□□□□□ -1.22
SPTLC1P2-201ENST00000407089 SIN3AQ96ST3 1273 aa7.45□□□□□ -1.22
SPTLC1P2-201ENST00000407089 GJA3Q9Y6H8 435 aa7.45□□□□□ -1.22
SPTLC1P2-201ENST00000407089 COL11A2P13942 1736 aaPredicted RBP7.44□□□□□ -1.22
SPTLC1P2-201ENST00000407089 A0A087WZG4 1122 aa7.44□□□□□ -1.22
SPTLC1P2-201ENST00000407089 SCNN1DP51172 638 aa7.44□□□□□ -1.22
SPTLC1P2-201ENST00000407089 EIF5P55010 431 aaKnown RBP7.44□□□□□ -1.22
SPTLC1P2-201ENST00000407089 EIF4A2Q14240 407 aaKnown RBP7.44□□□□□ -1.22
SPTLC1P2-201ENST00000407089 RTKN2Q8IZC4 609 aa7.44□□□□□ -1.22
SPTLC1P2-201ENST00000407089 JDP2Q8WYK2 163 aa7.44□□□□□ -1.22
SPTLC1P2-201ENST00000407089 SAGE1Q9NXZ1 904 aa7.44□□□□□ -1.22
SPTLC1P2-201ENST00000407089 POLKQ9UBT6 870 aa7.44□□□□□ -1.22
SPTLC1P2-201ENST00000407089 HPS5Q9UPZ3 1129 aa7.44□□□□□ -1.22
SPTLC1P2-201ENST00000407089 TRPM7Q96QT4 1865 aa7.43□□□□□ -1.22
SPTLC1P2-201ENST00000407089 TRPA1O75762 1119 aa7.43□□□□□ -1.22
SPTLC1P2-201ENST00000407089 EIF6P56537 245 aaKnown RBP7.43□□□□□ -1.22
SPTLC1P2-201ENST00000407089 NEUROD1Q13562 356 aa7.43□□□□□ -1.22
SPTLC1P2-201ENST00000407089 AKAP4Q5JQC9 854 aa7.43□□□□□ -1.22
SPTLC1P2-201ENST00000407089 C1orf141Q5JVX7 400 aa7.43□□□□□ -1.22
SPTLC1P2-201ENST00000407089 CTU1Q7Z7A3 348 aaKnown RBP7.43□□□□□ -1.22
SPTLC1P2-201ENST00000407089 CNBD1Q8NA66 436 aa7.43□□□□□ -1.22
SPTLC1P2-201ENST00000407089 SETDB2Q96T68 719 aa7.43□□□□□ -1.22
SPTLC1P2-201ENST00000407089 CARD14Q9BXL6 1004 aa7.43□□□□□ -1.22
SPTLC1P2-201ENST00000407089 RNF186Q9NXI6 227 aa7.43□□□□□ -1.22
SPTLC1P2-201ENST00000407089 FAM155AB1AL88 458 aaPredicted RBP7.42□□□□□ -1.22
SPTLC1P2-201ENST00000407089 NPR1P16066 1061 aa7.42□□□□□ -1.22
SPTLC1P2-201ENST00000407089 ST5P78524 1137 aa7.42□□□□□ -1.22
SPTLC1P2-201ENST00000407089 SLC39A6Q13433 755 aa7.42□□□□□ -1.22
SPTLC1P2-201ENST00000407089 GLIS2Q9BZE0 524 aaPredicted RBP7.42□□□□□ -1.22
SPTLC1P2-201ENST00000407089 PGAP2Q9UHJ9 254 aa7.42□□□□□ -1.22
SPTLC1P2-201ENST00000407089 TBC1D2BQ9UPU7 963 aa7.42□□□□□ -1.22
SPTLC1P2-201ENST00000407089 CACNA1SQ13698 1873 aa7.41□□□□□ -1.22
SPTLC1P2-201ENST00000407089 KLRG2A4D1S0 409 aaPredicted RBP7.41□□□□□ -1.22
SPTLC1P2-201ENST00000407089 NPHP1O15259 732 aa7.41□□□□□ -1.22
SPTLC1P2-201ENST00000407089 SLC24A1O60721 1099 aa7.41□□□□□ -1.22
SPTLC1P2-201ENST00000407089 KIF23Q02241 960 aaPredicted RBP7.41□□□□□ -1.22
SPTLC1P2-201ENST00000407089 PKN2Q16513 984 aaKnown RBP7.41□□□□□ -1.22
SPTLC1P2-201ENST00000407089 VSIG10Q8N0Z9 540 aa7.41□□□□□ -1.22
SPTLC1P2-201ENST00000407089 PSMD1Q99460 953 aa7.41□□□□□ -1.22
SPTLC1P2-201ENST00000407089 ZNF408Q9H9D4 720 aa7.41□□□□□ -1.22
SPTLC1P2-201ENST00000407089 SLC52A2Q9HAB3 445 aa7.41□□□□□ -1.22
SPTLC1P2-201ENST00000407089 LGR6Q9HBX8 967 aa7.41□□□□□ -1.22
SPTLC1P2-201ENST00000407089 STARD3NLO95772 234 aa7.4□□□□□ -1.22
SPTLC1P2-201ENST00000407089 HUNKP57058 714 aa7.4□□□□□ -1.22
SPTLC1P2-201ENST00000407089 ADARB2Q9NS39 739 aaKnown RBP7.4□□□□□ -1.22
SPTLC1P2-201ENST00000407089 GPRC5DQ9NZD1 345 aa7.4□□□□□ -1.22
SPTLC1P2-201ENST00000407089 ARFGEF2Q9Y6D5 1785 aa7.4□□□□□ -1.23
SPTLC1P2-201ENST00000407089 COL4A5P29400 1685 aa7.39□□□□□ -1.23
SPTLC1P2-201ENST00000407089 ALDH1B1P30837 517 aa7.39□□□□□ -1.23
SPTLC1P2-201ENST00000407089 RGMBQ6NW40 437 aa7.39□□□□□ -1.23
SPTLC1P2-201ENST00000407089 CDC37L1Q7L3B6 337 aa7.39□□□□□ -1.23
SPTLC1P2-201ENST00000407089 AEBP1Q8IUX7 1158 aa7.39□□□□□ -1.23
SPTLC1P2-201ENST00000407089 SLC17A8Q8NDX2 589 aa7.39□□□□□ -1.23
SPTLC1P2-201ENST00000407089 CCDC102AQ96A19 550 aa7.39□□□□□ -1.23
SPTLC1P2-201ENST00000407089 CSRNP1Q96S65 589 aa7.39□□□□□ -1.23
SPTLC1P2-201ENST00000407089 ANKRD26Q9UPS8 1709 aa7.38□□□□□ -1.23
SPTLC1P2-201ENST00000407089 SNED1Q8TER0 1413 aa7.38□□□□□ -1.23
SPTLC1P2-201ENST00000407089 CAMTA2O94983 1202 aa7.38□□□□□ -1.23
SPTLC1P2-201ENST00000407089 HIRAP54198 1017 aaPredicted RBP7.38□□□□□ -1.23
SPTLC1P2-201ENST00000407089 DLK2Q6UY11 383 aa7.38□□□□□ -1.23
SPTLC1P2-201ENST00000407089 USP48Q86UV5 1035 aa7.38□□□□□ -1.23
SPTLC1P2-201ENST00000407089 NBPF5PQ86XG9 351 aaPredicted RBP7.38□□□□□ -1.23
SPTLC1P2-201ENST00000407089 LARGE2Q8N3Y3 721 aa7.38□□□□□ -1.23
SPTLC1P2-201ENST00000407089 ZC3H15Q8WU90 426 aaKnown RBP7.38□□□□□ -1.23
SPTLC1P2-201ENST00000407089 ZNF330Q9Y3S2 320 aaPredicted RBP7.38□□□□□ -1.23
SPTLC1P2-201ENST00000407089 KIF20BQ96Q89 1820 aa7.38□□□□□ -1.23
SPTLC1P2-201ENST00000407089 RNMTO43148 476 aaKnown RBP7.37□□□□□ -1.23
SPTLC1P2-201ENST00000407089 IL6STP40189 918 aaPredicted RBP7.37□□□□□ -1.23
SPTLC1P2-201ENST00000407089 TNNT2P45379 298 aaPredicted RBP7.37□□□□□ -1.23
SPTLC1P2-201ENST00000407089 ZNF157P51786 506 aaPredicted RBP7.37□□□□□ -1.23
SPTLC1P2-201ENST00000407089 CC2D2BQ6DHV5 1058 aa7.37□□□□□ -1.23
SPTLC1P2-201ENST00000407089 HDAC9Q9UKV0 1011 aa7.37□□□□□ -1.23
SPTLC1P2-201ENST00000407089 COLQQ9Y215 455 aaPredicted RBP7.37□□□□□ -1.23
SPTLC1P2-201ENST00000407089 A1BGP04217 495 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms