RNA–Protein interactions for RNA: ENST00000406921.7

ITSN2-203, Transcript of intersectin 2, humanhuman

TSL 1 (best) BASIC

Gene ITSN2, Length 4,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-203ENST00000406921 IL13P35225 146 aa17.59■□□□□ 0.41
ITSN2-203ENST00000406921 GDPD2Q9HCC8 539 aa17.59■□□□□ 0.41
ITSN2-203ENST00000406921 PDE1AP54750 535 aa17.59■□□□□ 0.41
ITSN2-203ENST00000406921 DCAF5Q96JK2 942 aa17.59■□□□□ 0.41
ITSN2-203ENST00000406921 IFIT3O14879 490 aaKnown RBP17.59■□□□□ 0.41
ITSN2-203ENST00000406921 RNMTO43148 476 aaKnown RBP17.59■□□□□ 0.41
ITSN2-203ENST00000406921 DZIP3Q86Y13 1208 aaKnown RBP17.59■□□□□ 0.41
ITSN2-203ENST00000406921 SETDB2Q96T68 719 aa17.59■□□□□ 0.41
ITSN2-203ENST00000406921 NUCB1Q02818 461 aa17.58■□□□□ 0.41
ITSN2-203ENST00000406921 LRRC2Q9BYS8 371 aa17.58■□□□□ 0.41
ITSN2-203ENST00000406921 R3HCC1Q9Y3T6 440 aaKnown RBP17.58■□□□□ 0.41
ITSN2-203ENST00000406921 MAP3K5Q99683 1374 aa17.58■□□□□ 0.4
ITSN2-203ENST00000406921 HDAC1Q13547 482 aaPredicted RBP17.58■□□□□ 0.4
ITSN2-203ENST00000406921 FAM43AQ8N2R8 423 aa17.58■□□□□ 0.4
ITSN2-203ENST00000406921 ATP2B3Q16720 1220 aa17.58■□□□□ 0.4
ITSN2-203ENST00000406921 CAMK4Q16566 473 aa17.57■□□□□ 0.4
ITSN2-203ENST00000406921 CFAP45Q9UL16 551 aa17.57■□□□□ 0.4
ITSN2-203ENST00000406921 SSFA2P28290 1259 aa17.57■□□□□ 0.4
ITSN2-203ENST00000406921 ATP8B2P98198 1209 aa17.57■□□□□ 0.4
ITSN2-203ENST00000406921 TMEM132AQ24JP5 1023 aa17.57■□□□□ 0.4
ITSN2-203ENST00000406921 ADGRL2O95490 1459 aa17.57■□□□□ 0.4
ITSN2-203ENST00000406921 ARHGEF12Q9NZN5 1544 aa17.57■□□□□ 0.4
ITSN2-203ENST00000406921 CCDC192P0DO97 292 aa17.57■□□□□ 0.4
ITSN2-203ENST00000406921 IQCA1Q86XH1 822 aa17.57■□□□□ 0.4
ITSN2-203ENST00000406921 ZNF444Q8N0Y2 327 aaPredicted RBP17.57■□□□□ 0.4
ITSN2-203ENST00000406921 CIZ1Q9ULV3 898 aaPredicted RBP17.57■□□□□ 0.4
ITSN2-203ENST00000406921 NOL7Q9UMY1 257 aaKnown RBP17.57■□□□□ 0.4
ITSN2-203ENST00000406921 LIMCH1Q9UPQ0 1083 aa17.56■□□□□ 0.4
ITSN2-203ENST00000406921 TMEM2Q9UHN6 1383 aa17.56■□□□□ 0.4
ITSN2-203ENST00000406921 GOLGA8BA8MQT2 603 aa17.56■□□□□ 0.4
ITSN2-203ENST00000406921 GOLGA6L1Q8N7Z2 621 aa17.56■□□□□ 0.4
ITSN2-203ENST00000406921 TFIP11Q9UBB9 837 aaKnown RBP17.56■□□□□ 0.4
ITSN2-203ENST00000406921 ALDH1L1O75891 902 aa17.56■□□□□ 0.4
ITSN2-203ENST00000406921 MICU3Q86XE3 530 aa17.56■□□□□ 0.4
ITSN2-203ENST00000406921 NLRP3Q96P20 1036 aa17.56■□□□□ 0.4
ITSN2-203ENST00000406921 SLAIN2Q9P270 581 aa17.56■□□□□ 0.4
ITSN2-203ENST00000406921 COL17A1Q9UMD9 1497 aaPredicted RBP17.56■□□□□ 0.4
ITSN2-203ENST00000406921 CCDC152Q4G0S7 254 aa17.55■□□□□ 0.4
ITSN2-203ENST00000406921 SERPINC1P01008 464 aa17.55■□□□□ 0.4
ITSN2-203ENST00000406921 DHX8Q14562 1220 aaKnown RBP17.55■□□□□ 0.4
ITSN2-203ENST00000406921 CTCFLQ8NI51 663 aaPredicted RBP17.55■□□□□ 0.4
ITSN2-203ENST00000406921 F8W031 263 aaPredicted RBP17.55■□□□□ 0.4
ITSN2-203ENST00000406921 FAM89AQ96GI7 184 aa17.55■□□□□ 0.4
ITSN2-203ENST00000406921 FAM13BQ9NYF5 915 aa17.55■□□□□ 0.4
ITSN2-203ENST00000406921 TRPM2O94759 1503 aa17.55■□□□□ 0.4
ITSN2-203ENST00000406921 PIK3C2GO75747 1445 aa17.55■□□□□ 0.4
ITSN2-203ENST00000406921 ANKRD18AQ8IVF6 992 aa17.55■□□□□ 0.4
ITSN2-203ENST00000406921 C8orf76Q96K31 380 aa17.55■□□□□ 0.4
ITSN2-203ENST00000406921 SLC12A7Q9Y666 1083 aa17.54■□□□□ 0.4
ITSN2-203ENST00000406921 ZNF790Q6PG37 636 aa17.54■□□□□ 0.4
ITSN2-203ENST00000406921 CT47A1Q5JQC4 288 aaPredicted RBP17.54■□□□□ 0.4
ITSN2-203ENST00000406921 TARBP1Q13395 1621 aaKnown RBP17.54■□□□□ 0.4
ITSN2-203ENST00000406921 SYCE3A1L190 88 aa17.54■□□□□ 0.4
ITSN2-203ENST00000406921 LETM1O95202 739 aaPredicted RBP17.54■□□□□ 0.4
ITSN2-203ENST00000406921 A1BGP04217 495 aa17.54■□□□□ 0.4
ITSN2-203ENST00000406921 CEP85Q6P2H3 762 aa17.54■□□□□ 0.4
ITSN2-203ENST00000406921 TRIM35Q9UPQ4 493 aa17.54■□□□□ 0.4
ITSN2-203ENST00000406921 JAG2Q9Y219 1238 aa17.54■□□□□ 0.4
ITSN2-203ENST00000406921 NUP62CLQ9H1M0 184 aa17.53■□□□□ 0.4
ITSN2-203ENST00000406921 SAMD9Q5K651 1589 aa17.53■□□□□ 0.4
ITSN2-203ENST00000406921 ZNF76P36508 570 aa17.53■□□□□ 0.4
ITSN2-203ENST00000406921 KLHDC4Q8TBB5 520 aa17.53■□□□□ 0.4
ITSN2-203ENST00000406921 ZBTB40Q9NUA8 1239 aa17.53■□□□□ 0.4
ITSN2-203ENST00000406921 NECAB1Q8N987 351 aa17.53■□□□□ 0.4
ITSN2-203ENST00000406921 VAT1LQ9HCJ6 419 aa17.53■□□□□ 0.4
ITSN2-203ENST00000406921 CCDC96Q2M329 555 aa17.52■□□□□ 0.4
ITSN2-203ENST00000406921 ZFYVE27Q5T4F4 411 aa17.52■□□□□ 0.4
ITSN2-203ENST00000406921 SMARCC1Q92922 1105 aaPredicted RBP17.52■□□□□ 0.4
ITSN2-203ENST00000406921 DDX21Q9NR30 783 aaKnown RBP eCLIP17.52■□□□□ 0.4
ITSN2-203ENST00000406921 MBD5Q9P267 1494 aa17.52■□□□□ 0.4
ITSN2-203ENST00000406921 BRF1Q92994 677 aa17.52■□□□□ 0.39
ITSN2-203ENST00000406921 ZNF287Q9HBT7 754 aa17.52■□□□□ 0.39
ITSN2-203ENST00000406921 TFCP2L1Q9NZI6 479 aa17.52■□□□□ 0.39
ITSN2-203ENST00000406921 USP16Q9Y5T5 823 aa17.52■□□□□ 0.39
ITSN2-203ENST00000406921 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.52■□□□□ 0.39
ITSN2-203ENST00000406921 MAST1Q9Y2H9 1570 aa17.52■□□□□ 0.39
ITSN2-203ENST00000406921 FILIP1Q7Z7B0 1213 aa17.52■□□□□ 0.39
ITSN2-203ENST00000406921 NSFL1CQ9UNZ2 370 aaKnown RBP17.52■□□□□ 0.39
ITSN2-203ENST00000406921 GOLGA8AA7E2F4 631 aa17.51■□□□□ 0.39
ITSN2-203ENST00000406921 IRS4O14654 1257 aaPredicted RBP17.51■□□□□ 0.39
ITSN2-203ENST00000406921 FILIP1LQ4L180 1135 aa17.51■□□□□ 0.39
ITSN2-203ENST00000406921 TRMT1LQ7Z2T5 733 aaKnown RBP17.51■□□□□ 0.39
ITSN2-203ENST00000406921 MAGEC2Q9UBF1 373 aaPredicted RBP17.51■□□□□ 0.39
ITSN2-203ENST00000406921 STX8Q9UNK0 236 aa17.51■□□□□ 0.39
ITSN2-203ENST00000406921 EIF2AK4Q9P2K8 1649 aaKnown RBP17.51■□□□□ 0.39
ITSN2-203ENST00000406921 TSPY2A6NKD2 308 aa17.51■□□□□ 0.39
ITSN2-203ENST00000406921 SLC9C2Q5TAH2 1124 aa17.51■□□□□ 0.39
ITSN2-203ENST00000406921 NEK1Q96PY6 1258 aa17.51■□□□□ 0.39
ITSN2-203ENST00000406921 PTPRTO14522 1441 aa17.5■□□□□ 0.39
ITSN2-203ENST00000406921 PRIM1P49642 420 aaKnown RBP17.5■□□□□ 0.39
ITSN2-203ENST00000406921 TBC1D32Q96NH3 1257 aa17.5■□□□□ 0.39
ITSN2-203ENST00000406921 SH2B1Q9NRF2 756 aaPredicted RBP17.5■□□□□ 0.39
ITSN2-203ENST00000406921 IL15P40933 162 aaPredicted RBP17.5■□□□□ 0.39
ITSN2-203ENST00000406921 FAM98CQ17RN3 349 aaKnown RBP17.5■□□□□ 0.39
ITSN2-203ENST00000406921 TMEM67Q5HYA8 995 aa17.5■□□□□ 0.39
ITSN2-203ENST00000406921 CCDC24Q8N4L8 307 aa17.5■□□□□ 0.39
ITSN2-203ENST00000406921 WASF1Q92558 559 aa17.5■□□□□ 0.39
ITSN2-203ENST00000406921 EDC4Q6P2E9 1401 aaKnown RBP17.5■□□□□ 0.39
ITSN2-203ENST00000406921 CYP7A1P22680 504 aa17.5■□□□□ 0.39
ITSN2-203ENST00000406921 CNKSR2Q8WXI2 1034 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms