RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 DMTNQ08495 405 aa18.04■□□□□ 0.48
ATG4B-206ENST00000405546 HS1BP3Q53T59 392 aa18.04■□□□□ 0.48
ATG4B-206ENST00000405546 KCNH5Q8NCM2 988 aa18.04■□□□□ 0.48
ATG4B-206ENST00000405546 SSH3Q8TE77 659 aa18.04■□□□□ 0.48
ATG4B-206ENST00000405546 NOLC1Q14978 699 aaKnown RBP eCLIP18.03■□□□□ 0.48
ATG4B-206ENST00000405546 CCDC8Q9H0W5 538 aaPredicted RBP18.03■□□□□ 0.48
ATG4B-206ENST00000405546 DBF4Q9UBU7 674 aaPredicted RBP18.03■□□□□ 0.48
ATG4B-206ENST00000405546 PEAK1Q9H792 1746 aa18.03■□□□□ 0.48
ATG4B-206ENST00000405546 SSH2Q76I76 1423 aa18.03■□□□□ 0.48
ATG4B-206ENST00000405546 VGLL3A8MV65 326 aa18.03■□□□□ 0.48
ATG4B-206ENST00000405546 CYP2E1P05181 493 aaPredicted RBP18.03■□□□□ 0.48
ATG4B-206ENST00000405546 RAB11FIP3O75154 756 aa18.03■□□□□ 0.48
ATG4B-206ENST00000405546 MCM2P49736 904 aa18.03■□□□□ 0.48
ATG4B-206ENST00000405546 AACSQ86V21 672 aa18.03■□□□□ 0.48
ATG4B-206ENST00000405546 MYRIPQ8NFW9 859 aa18.02■□□□□ 0.48
ATG4B-206ENST00000405546 PROSER2Q86WR7 435 aaPredicted RBP18.02■□□□□ 0.47
ATG4B-206ENST00000405546 ADCY5O95622 1261 aa18.01■□□□□ 0.47
ATG4B-206ENST00000405546 G3BP1Q13283 466 aaKnown RBP eCLIP18.01■□□□□ 0.47
ATG4B-206ENST00000405546 AKAP4Q5JQC9 854 aa18.01■□□□□ 0.47
ATG4B-206ENST00000405546 BEND3Q5T5X7 828 aa18.01■□□□□ 0.47
ATG4B-206ENST00000405546 HSP90AB4PQ58FF6 505 aa18.01■□□□□ 0.47
ATG4B-206ENST00000405546 BCL2L12Q9HB09 334 aa18.01■□□□□ 0.47
ATG4B-206ENST00000405546 CASTP20810 708 aaKnown RBP18■□□□□ 0.47
ATG4B-206ENST00000405546 UBR1Q8IWV7 1749 aa18■□□□□ 0.47
ATG4B-206ENST00000405546 KLHDC4Q8TBB5 520 aa18■□□□□ 0.47
ATG4B-206ENST00000405546 RAPGEF4Q8WZA2 1011 aa18■□□□□ 0.47
ATG4B-206ENST00000405546 DDX17Q92841 729 aaKnown RBP18■□□□□ 0.47
ATG4B-206ENST00000405546 CHMP4AQ9BY43 222 aa18■□□□□ 0.47
ATG4B-206ENST00000405546 PRPF40BQ6NWY9 871 aaKnown RBP18■□□□□ 0.47
ATG4B-206ENST00000405546 GPATCH3Q96I76 525 aa18■□□□□ 0.47
ATG4B-206ENST00000405546 RNMTO43148 476 aaKnown RBP17.99■□□□□ 0.47
ATG4B-206ENST00000405546 KIF3AQ9Y496 699 aa17.99■□□□□ 0.47
ATG4B-206ENST00000405546 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.99■□□□□ 0.47
ATG4B-206ENST00000405546 CLEC17AQ6ZS10 378 aa17.99■□□□□ 0.47
ATG4B-206ENST00000405546 MTERF4Q7Z6M4 381 aaKnown RBP17.99■□□□□ 0.47
ATG4B-206ENST00000405546 CGNQ9P2M7 1197 aaKnown RBP17.99■□□□□ 0.47
ATG4B-206ENST00000405546 AKAP12Q02952 1782 aa17.99■□□□□ 0.47
ATG4B-206ENST00000405546 BOLA2Q9H3K6 86 aa17.99■□□□□ 0.47
ATG4B-206ENST00000405546 STAP2Q9UGK3 403 aa17.99■□□□□ 0.47
ATG4B-206ENST00000405546 FGD1P98174 961 aa17.98■□□□□ 0.47
ATG4B-206ENST00000405546 JAKMIP1Q96N16 626 aaKnown RBP17.98■□□□□ 0.47
ATG4B-206ENST00000405546 RASEFQ8IZ41 740 aa17.98■□□□□ 0.47
ATG4B-206ENST00000405546 PDCL2Q8N4E4 241 aa17.98■□□□□ 0.47
ATG4B-206ENST00000405546 SMC3Q9UQE7 1217 aa17.98■□□□□ 0.47
ATG4B-206ENST00000405546 DIP2AQ14689 1571 aa17.98■□□□□ 0.47
ATG4B-206ENST00000405546 NAA30Q147X3 362 aaPredicted RBP17.97■□□□□ 0.47
ATG4B-206ENST00000405546 KRT28Q7Z3Y7 464 aa17.97■□□□□ 0.47
ATG4B-206ENST00000405546 CABLES1Q8TDN4 633 aa17.97■□□□□ 0.47
ATG4B-206ENST00000405546 AXIN2Q9Y2T1 843 aa17.97■□□□□ 0.47
ATG4B-206ENST00000405546 GLRX3O76003 335 aaKnown RBP17.97■□□□□ 0.47
ATG4B-206ENST00000405546 AMOTQ4VCS5 1084 aa17.97■□□□□ 0.47
ATG4B-206ENST00000405546 ZNF771Q7L3S4 317 aaPredicted RBP17.97■□□□□ 0.47
ATG4B-206ENST00000405546 TCEANC2Q96MN5 208 aa17.97■□□□□ 0.47
ATG4B-206ENST00000405546 VPS37CA5D8V6 355 aaPredicted RBP17.97■□□□□ 0.47
ATG4B-206ENST00000405546 FIBPO43427 364 aa17.97■□□□□ 0.47
ATG4B-206ENST00000405546 DDX58O95786 925 aaKnown RBP17.97■□□□□ 0.47
ATG4B-206ENST00000405546 USP48Q86UV5 1035 aa17.97■□□□□ 0.47
ATG4B-206ENST00000405546 CCDC83Q8IWF9 413 aa17.96■□□□□ 0.47
ATG4B-206ENST00000405546 RUFY2Q8WXA3 655 aa17.96■□□□□ 0.47
ATG4B-206ENST00000405546 SALL3Q9BXA9 1300 aa17.96■□□□□ 0.47
ATG4B-206ENST00000405546 SGSM2O43147 1006 aa17.96■□□□□ 0.47
ATG4B-206ENST00000405546 AK2P54819 239 aa17.96■□□□□ 0.47
ATG4B-206ENST00000405546 NEXNQ0ZGT2 675 aa17.96■□□□□ 0.47
ATG4B-206ENST00000405546 NFATC2IPQ8NCF5 419 aa17.96■□□□□ 0.47
ATG4B-206ENST00000405546 PI4K2BQ8TCG2 481 aa17.96■□□□□ 0.47
ATG4B-206ENST00000405546 GIGYF1O75420 1035 aaPredicted RBP17.96■□□□□ 0.46
ATG4B-206ENST00000405546 ANAPC15P60006 121 aa17.96■□□□□ 0.46
ATG4B-206ENST00000405546 CHRNA2Q15822 529 aa17.96■□□□□ 0.46
ATG4B-206ENST00000405546 KSR2Q6VAB6 950 aa17.96■□□□□ 0.46
ATG4B-206ENST00000405546 ECHDC1Q9NTX5 307 aa17.96■□□□□ 0.46
ATG4B-206ENST00000405546 BABAM1Q9NWV8 329 aa17.96■□□□□ 0.46
ATG4B-206ENST00000405546 ZNF330Q9Y3S2 320 aaPredicted RBP17.96■□□□□ 0.46
ATG4B-206ENST00000405546 SNX14Q9Y5W7 946 aa17.96■□□□□ 0.46
ATG4B-206ENST00000405546 RGPD8O14715 1765 aaPredicted RBP17.95■□□□□ 0.46
ATG4B-206ENST00000405546 GIMAP6Q6P9H5 292 aa17.95■□□□□ 0.46
ATG4B-206ENST00000405546 RIOK3O14730 519 aaKnown RBP17.95■□□□□ 0.46
ATG4B-206ENST00000405546 FSD1Q9BTV5 496 aa17.95■□□□□ 0.46
ATG4B-206ENST00000405546 PYCARDQ9ULZ3 195 aa17.95■□□□□ 0.46
ATG4B-206ENST00000405546 HSPA4P34932 840 aa17.94■□□□□ 0.46
ATG4B-206ENST00000405546 MCM5P33992 734 aa17.94■□□□□ 0.46
ATG4B-206ENST00000405546 MYD88Q99836 296 aa17.94■□□□□ 0.46
ATG4B-206ENST00000405546 BICC1Q9H694 974 aaKnown RBP17.94■□□□□ 0.46
ATG4B-206ENST00000405546 CNPY2Q9Y2B0 182 aa17.94■□□□□ 0.46
ATG4B-206ENST00000405546 ZKSCAN1P17029 563 aaPredicted RBP17.94■□□□□ 0.46
ATG4B-206ENST00000405546 BRD1O95696 1058 aa17.93■□□□□ 0.46
ATG4B-206ENST00000405546 MBD3O95983 291 aa17.93■□□□□ 0.46
ATG4B-206ENST00000405546 PTH1RQ03431 593 aa17.93■□□□□ 0.46
ATG4B-206ENST00000405546 NECAB1Q8N987 351 aa17.93■□□□□ 0.46
ATG4B-206ENST00000405546 WDR33Q9C0J8 1336 aaKnown RBP17.93■□□□□ 0.46
ATG4B-206ENST00000405546 POLA2Q14181 598 aa17.93■□□□□ 0.46
ATG4B-206ENST00000405546 TTC5Q8N0Z6 440 aa17.93■□□□□ 0.46
ATG4B-206ENST00000405546 PIBF1Q8WXW3 757 aa17.93■□□□□ 0.46
ATG4B-206ENST00000405546 SUCLG2Q96I99 432 aa17.93■□□□□ 0.46
ATG4B-206ENST00000405546 ATP5J2-PTCD1G3V325 749 aa17.92■□□□□ 0.46
ATG4B-206ENST00000405546 GRM8O00222 908 aa17.92■□□□□ 0.46
ATG4B-206ENST00000405546 PTCD1O75127 700 aaKnown RBP17.92■□□□□ 0.46
ATG4B-206ENST00000405546 COPS6Q7L5N1 327 aa17.92■□□□□ 0.46
ATG4B-206ENST00000405546 PDRG1Q9NUG6 133 aa17.92■□□□□ 0.46
ATG4B-206ENST00000405546 NDUFB9Q9Y6M9 179 aa17.92■□□□□ 0.46
ATG4B-206ENST00000405546 SYAP1Q96A49 352 aaPredicted RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms