RNA–Protein interactions for RNA: ENST00000404249.7

CDK11A-208, Transcript of cyclin dependent kinase 11A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CDK11A, Length 2,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-208ENST00000404249 KSR2Q6VAB6 950 aa21.45■■□□□ 1.02
CDK11A-208ENST00000404249 FOXD4L3Q6VB84 417 aaPredicted RBP21.45■■□□□ 1.02
CDK11A-208ENST00000404249 ARHGEF25Q86VW2 580 aa21.44■■□□□ 1.02
CDK11A-208ENST00000404249 RUFY2Q8WXA3 655 aa21.44■■□□□ 1.02
CDK11A-208ENST00000404249 GDPD2Q9HCC8 539 aa21.44■■□□□ 1.02
CDK11A-208ENST00000404249 GCP02774 474 aa21.43■■□□□ 1.02
CDK11A-208ENST00000404249 RUFY3Q7L099 469 aa21.43■■□□□ 1.02
CDK11A-208ENST00000404249 ERC1Q8IUD2 1116 aa21.43■■□□□ 1.02
CDK11A-208ENST00000404249 GPATCH3Q96I76 525 aa21.43■■□□□ 1.02
CDK11A-208ENST00000404249 ECHDC1Q9NTX5 307 aa21.43■■□□□ 1.02
CDK11A-208ENST00000404249 LIMCH1Q9UPQ0 1083 aa21.43■■□□□ 1.02
CDK11A-208ENST00000404249 USP48Q86UV5 1035 aa21.43■■□□□ 1.02
CDK11A-208ENST00000404249 PA2G4Q9UQ80 394 aaKnown RBP21.43■■□□□ 1.02
CDK11A-208ENST00000404249 GADD45BO75293 160 aaPredicted RBP21.42■■□□□ 1.02
CDK11A-208ENST00000404249 CWF19L2Q2TBE0 894 aaKnown RBP21.42■■□□□ 1.02
CDK11A-208ENST00000404249 ANKRD24Q8TF21 1146 aa21.42■■□□□ 1.02
CDK11A-208ENST00000404249 TSPY26PQ9H489 355 aa21.42■■□□□ 1.02
CDK11A-208ENST00000404249 HDAC5Q9UQL6 1122 aa21.42■■□□□ 1.02
CDK11A-208ENST00000404249 ADAMTS7Q9UKP4 1686 aa21.42■■□□□ 1.02
CDK11A-208ENST00000404249 PRAMEF22A3QJZ6 481 aa21.41■■□□□ 1.02
CDK11A-208ENST00000404249 IFIT2P09913 472 aaKnown RBP21.41■■□□□ 1.02
CDK11A-208ENST00000404249 CASTP20810 708 aaKnown RBP21.41■■□□□ 1.02
CDK11A-208ENST00000404249 TMEM87AQ8NBN3 555 aa21.41■■□□□ 1.02
CDK11A-208ENST00000404249 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.41■■□□□ 1.02
CDK11A-208ENST00000404249 NOL7Q9UMY1 257 aaKnown RBP21.4■■□□□ 1.02
CDK11A-208ENST00000404249 LMTK3Q96Q04 1460 aa21.4■■□□□ 1.02
CDK11A-208ENST00000404249 TRPM3Q9HCF6 1732 aaPredicted RBP21.4■■□□□ 1.02
CDK11A-208ENST00000404249 ZSCAN22P10073 491 aaPredicted RBP21.4■■□□□ 1.02
CDK11A-208ENST00000404249 PTH1RQ03431 593 aa21.4■■□□□ 1.02
CDK11A-208ENST00000404249 RNF214Q8ND24 703 aa21.4■■□□□ 1.02
CDK11A-208ENST00000404249 HYPKQ9NX55 129 aa21.4■■□□□ 1.02
CDK11A-208ENST00000404249 PHF14O94880 888 aa21.39■■□□□ 1.02
CDK11A-208ENST00000404249 XPCQ01831 940 aaPredicted RBP21.39■■□□□ 1.02
CDK11A-208ENST00000404249 LARP6Q9BRS8 491 aaKnown RBP21.39■■□□□ 1.02
CDK11A-208ENST00000404249 RGPD5Q99666 1765 aa21.39■■□□□ 1.01
CDK11A-208ENST00000404249 CPA1P15085 419 aa21.39■■□□□ 1.01
CDK11A-208ENST00000404249 AACSQ86V21 672 aa21.38■■□□□ 1.01
CDK11A-208ENST00000404249 ORAI2Q96SN7 254 aa21.38■■□□□ 1.01
CDK11A-208ENST00000404249 SMC3Q9UQE7 1217 aa21.38■■□□□ 1.01
CDK11A-208ENST00000404249 STX6O43752 255 aa21.38■■□□□ 1.01
CDK11A-208ENST00000404249 OFD1O75665 1012 aa21.38■■□□□ 1.01
CDK11A-208ENST00000404249 LINS1Q8NG48 757 aa21.38■■□□□ 1.01
CDK11A-208ENST00000404249 EVI5LQ96CN4 794 aa21.38■■□□□ 1.01
CDK11A-208ENST00000404249 SUCLG2Q96I99 432 aa21.38■■□□□ 1.01
CDK11A-208ENST00000404249 GRM8O00222 908 aa21.37■■□□□ 1.01
CDK11A-208ENST00000404249 LARGE1O95461 756 aa21.37■■□□□ 1.01
CDK11A-208ENST00000404249 SYT1P21579 422 aa21.37■■□□□ 1.01
CDK11A-208ENST00000404249 PRPF40BQ6NWY9 871 aaKnown RBP21.37■■□□□ 1.01
CDK11A-208ENST00000404249 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.37■■□□□ 1.01
CDK11A-208ENST00000404249 CNPY2Q9Y2B0 182 aa21.37■■□□□ 1.01
CDK11A-208ENST00000404249 C5P01031 1676 aa21.37■■□□□ 1.01
CDK11A-208ENST00000404249 UTYO14607 1347 aa21.37■■□□□ 1.01
CDK11A-208ENST00000404249 KCNB2Q92953 911 aa21.37■■□□□ 1.01
CDK11A-208ENST00000404249 JAKMIP1Q96N16 626 aaKnown RBP21.37■■□□□ 1.01
CDK11A-208ENST00000404249 DDX58O95786 925 aaKnown RBP21.36■■□□□ 1.01
CDK11A-208ENST00000404249 VPS53Q5VIR6 699 aa21.36■■□□□ 1.01
CDK11A-208ENST00000404249 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.36■■□□□ 1.01
CDK11A-208ENST00000404249 ADCK5Q3MIX3 580 aa21.36■■□□□ 1.01
CDK11A-208ENST00000404249 LMOD2Q6P5Q4 547 aa21.36■■□□□ 1.01
CDK11A-208ENST00000404249 KAZALD1Q96I82 304 aa21.36■■□□□ 1.01
CDK11A-208ENST00000404249 TM6SF1Q9BZW5 370 aa21.36■■□□□ 1.01
CDK11A-208ENST00000404249 DDX21Q9NR30 783 aaKnown RBP eCLIP21.36■■□□□ 1.01
CDK11A-208ENST00000404249 PDRG1Q9NUG6 133 aa21.36■■□□□ 1.01
CDK11A-208ENST00000404249 CCDC171Q6TFL3 1326 aa21.36■■□□□ 1.01
CDK11A-208ENST00000404249 ZNF500O60304 480 aaPredicted RBP21.35■■□□□ 1.01
CDK11A-208ENST00000404249 F13A1P00488 732 aa21.35■■□□□ 1.01
CDK11A-208ENST00000404249 TPM2P07951 284 aa21.35■■□□□ 1.01
CDK11A-208ENST00000404249 BICC1Q9H694 974 aaKnown RBP21.35■■□□□ 1.01
CDK11A-208ENST00000404249 CCDC39Q9UFE4 941 aa21.35■■□□□ 1.01
CDK11A-208ENST00000404249 ZKSCAN5Q9Y2L8 839 aa21.35■■□□□ 1.01
CDK11A-208ENST00000404249 ZSWIM6Q9HCJ5 1215 aa21.35■■□□□ 1.01
CDK11A-208ENST00000404249 SASH1O94885 1247 aa21.34■■□□□ 1.01
CDK11A-208ENST00000404249 CCDC83Q8IWF9 413 aa21.34■■□□□ 1.01
CDK11A-208ENST00000404249 AXIN2Q9Y2T1 843 aa21.34■■□□□ 1.01
CDK11A-208ENST00000404249 CYP46A1Q9Y6A2 500 aa21.34■■□□□ 1.01
CDK11A-208ENST00000404249 SCN11AQ9UI33 1791 aa21.34■■□□□ 1.01
CDK11A-208ENST00000404249 AIMP1Q12904 312 aaKnown RBP21.34■■□□□ 1.01
CDK11A-208ENST00000404249 G3BP1Q13283 466 aaKnown RBP eCLIP21.34■■□□□ 1.01
CDK11A-208ENST00000404249 CCDC183Q5T5S1 534 aa21.34■■□□□ 1.01
CDK11A-208ENST00000404249 ZSCAN31Q96LW9 406 aaPredicted RBP21.34■■□□□ 1.01
CDK11A-208ENST00000404249 NECTIN1Q15223 517 aa21.33■■□□□ 1.01
CDK11A-208ENST00000404249 SH2B1Q9NRF2 756 aaPredicted RBP21.33■■□□□ 1.01
CDK11A-208ENST00000404249 ATP6V1DQ9Y5K8 247 aa21.33■■□□□ 1.01
CDK11A-208ENST00000404249 HIP1O00291 1037 aa21.33■■□□□ 1
CDK11A-208ENST00000404249 GJB2P29033 226 aa21.33■■□□□ 1
CDK11A-208ENST00000404249 PDIA6Q15084 440 aa21.33■■□□□ 1
CDK11A-208ENST00000404249 EAF2Q96CJ1 260 aaPredicted RBP21.33■■□□□ 1
CDK11A-208ENST00000404249 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.33■■□□□ 1
CDK11A-208ENST00000404249 MCM5P33992 734 aa21.32■■□□□ 1
CDK11A-208ENST00000404249 RBM8AQ9Y5S9 174 aaKnown RBP21.32■■□□□ 1
CDK11A-208ENST00000404249 KIF1AQ12756 1690 aa21.32■■□□□ 1
CDK11A-208ENST00000404249 NPHP4O75161 1426 aaPredicted RBP21.32■■□□□ 1
CDK11A-208ENST00000404249 ZKSCAN1P17029 563 aaPredicted RBP21.31■■□□□ 1
CDK11A-208ENST00000404249 UBE2HP62256 183 aa21.31■■□□□ 1
CDK11A-208ENST00000404249 NMIQ13287 307 aaPredicted RBP21.31■■□□□ 1
CDK11A-208ENST00000404249 MRC1P22897 1456 aa21.31■■□□□ 1
CDK11A-208ENST00000404249 FAM227BQ96M60 508 aa21.31■■□□□ 1
CDK11A-208ENST00000404249 CCDC8Q9H0W5 538 aaPredicted RBP21.31■■□□□ 1
CDK11A-208ENST00000404249 IGKV5-2P06315 115 aa21.3■■□□□ 1
CDK11A-208ENST00000404249 CREB3L3Q68CJ9 461 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms