RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 DEFB115Q30KQ5 88 aa12.88□□□□□ -0.35
NUP43-204ENST00000403890 PLEKHO1Q53GL0 409 aaPredicted RBP12.88□□□□□ -0.35
NUP43-204ENST00000403890 MTHFSP49914 203 aa12.87□□□□□ -0.35
NUP43-204ENST00000403890 NFATC2IPQ8NCF5 419 aa12.87□□□□□ -0.35
NUP43-204ENST00000403890 ZNF622Q969S3 477 aaKnown RBP eCLIP12.87□□□□□ -0.35
NUP43-204ENST00000403890 NARFQ9UHQ1 456 aa12.87□□□□□ -0.35
NUP43-204ENST00000403890 RASSF10A6NK89 507 aa12.86□□□□□ -0.35
NUP43-204ENST00000403890 AMOTQ4VCS5 1084 aa12.86□□□□□ -0.35
NUP43-204ENST00000403890 ZNF530Q6P9A1 599 aaPredicted RBP12.86□□□□□ -0.35
NUP43-204ENST00000403890 CARD14Q9BXL6 1004 aa12.86□□□□□ -0.35
NUP43-204ENST00000403890 TAF1DQ9H5J8 278 aaPredicted RBP12.86□□□□□ -0.35
NUP43-204ENST00000403890 POLKQ9UBT6 870 aa12.86□□□□□ -0.35
NUP43-204ENST00000403890 PDZRN3Q9UPQ7 1066 aa12.86□□□□□ -0.35
NUP43-204ENST00000403890 SOS1Q07889 1333 aaPredicted RBP12.86□□□□□ -0.35
NUP43-204ENST00000403890 WDR33Q9C0J8 1336 aaKnown RBP12.86□□□□□ -0.35
NUP43-204ENST00000403890 LTBP3Q9NS15 1303 aa12.86□□□□□ -0.35
NUP43-204ENST00000403890 EIF4A2Q14240 407 aaKnown RBP12.85□□□□□ -0.35
NUP43-204ENST00000403890 POTEGQ6S5H5 508 aa12.85□□□□□ -0.35
NUP43-204ENST00000403890 L3MBTL3Q96JM7 780 aaPredicted RBP12.85□□□□□ -0.35
NUP43-204ENST00000403890 TAOK3Q9H2K8 898 aa12.85□□□□□ -0.35
NUP43-204ENST00000403890 EAPPQ56P03 285 aaPredicted RBP12.84□□□□□ -0.35
NUP43-204ENST00000403890 C1orf141Q5JVX7 400 aa12.84□□□□□ -0.35
NUP43-204ENST00000403890 DNAJC10Q8IXB1 793 aa12.84□□□□□ -0.35
NUP43-204ENST00000403890 BEGAINQ9BUH8 593 aa12.84□□□□□ -0.35
NUP43-204ENST00000403890 BCL2L12Q9HB09 334 aa12.84□□□□□ -0.35
NUP43-204ENST00000403890 PDE4DIPQ5VU43 2346 aa12.84□□□□□ -0.35
NUP43-204ENST00000403890 VIRMAQ69YN4 1812 aaKnown RBP12.83□□□□□ -0.35
NUP43-204ENST00000403890 SEC24BO95487 1268 aa12.83□□□□□ -0.36
NUP43-204ENST00000403890 CYP19A1P11511 503 aaPredicted RBP12.83□□□□□ -0.36
NUP43-204ENST00000403890 PDE6BP35913 854 aa12.83□□□□□ -0.36
NUP43-204ENST00000403890 BRIP1Q9BX63 1249 aa12.83□□□□□ -0.36
NUP43-204ENST00000403890 DLEC1Q9Y238 1755 aa12.83□□□□□ -0.36
NUP43-204ENST00000403890 AFDNP55196 1824 aaKnown RBP12.83□□□□□ -0.36
NUP43-204ENST00000403890 KIF20BQ96Q89 1820 aa12.83□□□□□ -0.36
NUP43-204ENST00000403890 CARMIL3Q8ND23 1372 aa12.82□□□□□ -0.36
NUP43-204ENST00000403890 DICER1Q9UPY3 1922 aaKnown RBP12.82□□□□□ -0.36
NUP43-204ENST00000403890 CDCA8Q53HL2 280 aa12.82□□□□□ -0.36
NUP43-204ENST00000403890 CNTROBQ8N137 903 aa12.82□□□□□ -0.36
NUP43-204ENST00000403890 CFAP44Q96MT7 982 aa12.82□□□□□ -0.36
NUP43-204ENST00000403890 ABT1Q9ULW3 272 aaKnown RBP12.82□□□□□ -0.36
NUP43-204ENST00000403890 ADAMTS7Q9UKP4 1686 aa12.82□□□□□ -0.36
NUP43-204ENST00000403890 NRXN2Q9P2S2 1712 aa12.82□□□□□ -0.36
NUP43-204ENST00000403890 SOGA3Q5TF21 947 aa12.81□□□□□ -0.36
NUP43-204ENST00000403890 BICDL1Q6ZP65 573 aa12.81□□□□□ -0.36
NUP43-204ENST00000403890 PNMA8AQ86V59 439 aaPredicted RBP12.81□□□□□ -0.36
NUP43-204ENST00000403890 FAM212AQ96EL1 285 aa12.81□□□□□ -0.36
NUP43-204ENST00000403890 HACL1Q9UJ83 578 aa12.81□□□□□ -0.36
NUP43-204ENST00000403890 PCDHB13Q9Y5F0 798 aa12.81□□□□□ -0.36
NUP43-204ENST00000403890 COL15A1P39059 1388 aa12.81□□□□□ -0.36
NUP43-204ENST00000403890 TTLL13PA6NNM8 815 aa12.8□□□□□ -0.36
NUP43-204ENST00000403890 EPHX2P34913 555 aa12.8□□□□□ -0.36
NUP43-204ENST00000403890 IER5LQ5T953 404 aa12.8□□□□□ -0.36
NUP43-204ENST00000403890 CNKSR1Q969H4 720 aa12.8□□□□□ -0.36
NUP43-204ENST00000403890 TJP1Q07157 1748 aa12.79□□□□□ -0.36
NUP43-204ENST00000403890 ANKRD26Q9UPS8 1709 aa12.79□□□□□ -0.36
NUP43-204ENST00000403890 FER1L6Q2WGJ9 1857 aa12.79□□□□□ -0.36
NUP43-204ENST00000403890 ECE1P42892 770 aa12.79□□□□□ -0.36
NUP43-204ENST00000403890 MAP1SQ66K74 1059 aaPredicted RBP12.79□□□□□ -0.36
NUP43-204ENST00000403890 CAPNS2Q96L46 248 aa12.79□□□□□ -0.36
NUP43-204ENST00000403890 ZBTB1Q9Y2K1 713 aa12.79□□□□□ -0.36
NUP43-204ENST00000403890 SCN4AP35499 1836 aa12.78□□□□□ -0.36
NUP43-204ENST00000403890 TNNT2P45379 298 aaPredicted RBP12.78□□□□□ -0.36
NUP43-204ENST00000403890 STYK1Q6J9G0 422 aa12.78□□□□□ -0.36
NUP43-204ENST00000403890 PRPF40BQ6NWY9 871 aaKnown RBP12.78□□□□□ -0.36
NUP43-204ENST00000403890 GPR101Q96P66 508 aaPredicted RBP12.78□□□□□ -0.36
NUP43-204ENST00000403890 CANXP27824 592 aaKnown RBP12.77□□□□□ -0.37
NUP43-204ENST00000403890 TBC1D9BQ66K14 1250 aa12.77□□□□□ -0.37
NUP43-204ENST00000403890 PRR5LQ6MZQ0 368 aa12.77□□□□□ -0.37
NUP43-204ENST00000403890 PAXIP1Q6ZW49 1069 aaPredicted RBP12.77□□□□□ -0.37
NUP43-204ENST00000403890 CCDC24Q8N4L8 307 aa12.77□□□□□ -0.37
NUP43-204ENST00000403890 DDX21Q9NR30 783 aaKnown RBP eCLIP12.77□□□□□ -0.37
NUP43-204ENST00000403890 TRPC6Q9Y210 931 aa12.77□□□□□ -0.37
NUP43-204ENST00000403890 A0A087WZG4 1122 aa12.76□□□□□ -0.37
NUP43-204ENST00000403890 SRGNP10124 158 aa12.76□□□□□ -0.37
NUP43-204ENST00000403890 NUBP1P53384 320 aa12.76□□□□□ -0.37
NUP43-204ENST00000403890 GRM1Q13255 1194 aa12.76□□□□□ -0.37
NUP43-204ENST00000403890 MCOLN1Q9GZU1 580 aa12.76□□□□□ -0.37
NUP43-204ENST00000403890 SLC52A2Q9HAB3 445 aa12.76□□□□□ -0.37
NUP43-204ENST00000403890 NPHP1O15259 732 aa12.75□□□□□ -0.37
NUP43-204ENST00000403890 EIF5P55010 431 aaKnown RBP12.75□□□□□ -0.37
NUP43-204ENST00000403890 SLC39A6Q13433 755 aa12.75□□□□□ -0.37
NUP43-204ENST00000403890 CYP4F22Q6NT55 531 aa12.75□□□□□ -0.37
NUP43-204ENST00000403890 VSIG10Q8N0Z9 540 aa12.75□□□□□ -0.37
NUP43-204ENST00000403890 C7orf43Q8WVR3 580 aa12.75□□□□□ -0.37
NUP43-204ENST00000403890 MASTLQ96GX5 879 aa12.75□□□□□ -0.37
NUP43-204ENST00000403890 ZNF541Q9H0D2 1346 aa12.75□□□□□ -0.37
NUP43-204ENST00000403890 TSKSQ9UJT2 592 aa12.75□□□□□ -0.37
NUP43-204ENST00000403890 RNF123Q5XPI4 1314 aa12.74□□□□□ -0.37
NUP43-204ENST00000403890 CA12O43570 354 aa12.74□□□□□ -0.37
NUP43-204ENST00000403890 STARD3NLO95772 234 aa12.74□□□□□ -0.37
NUP43-204ENST00000403890 MAP2K2P36507 400 aa12.74□□□□□ -0.37
NUP43-204ENST00000403890 CCDC93Q567U6 631 aa12.74□□□□□ -0.37
NUP43-204ENST00000403890 AEBP1Q8IUX7 1158 aa12.74□□□□□ -0.37
NUP43-204ENST00000403890 FKBP4Q02790 459 aaKnown RBP eCLIP12.73□□□□□ -0.37
NUP43-204ENST00000403890 AKAP4Q5JQC9 854 aa12.73□□□□□ -0.37
NUP43-204ENST00000403890 CNBD1Q8NA66 436 aa12.73□□□□□ -0.37
NUP43-204ENST00000403890 SETDB2Q96T68 719 aa12.73□□□□□ -0.37
NUP43-204ENST00000403890 LGR6Q9HBX8 967 aa12.73□□□□□ -0.37
NUP43-204ENST00000403890 ZNF277Q9NRM2 450 aaPredicted RBP12.73□□□□□ -0.37
NUP43-204ENST00000403890 TRIM35Q9UPQ4 493 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms