RNA–Protein interactions for RNA: ENST00000402697.5

PRAME-203, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-203ENST00000402697 ANP32BQ92688 251 aaKnown RBP15.78■□□□□ 0.12
PRAME-203ENST00000402697 C9orf78Q9NZ63 289 aaPredicted RBP15.78■□□□□ 0.12
PRAME-203ENST00000402697 LTBP4Q8N2S1 1624 aa15.77■□□□□ 0.12
PRAME-203ENST00000402697 MCTP1Q6DN14 999 aa15.77■□□□□ 0.12
PRAME-203ENST00000402697 KIAA1211Q6ZU35 1233 aa15.77■□□□□ 0.12
PRAME-203ENST00000402697 IL1RAPL2Q9NP60 686 aa15.77■□□□□ 0.12
PRAME-203ENST00000402697 PDIA4P13667 645 aaKnown RBP15.77■□□□□ 0.11
PRAME-203ENST00000402697 MAP3K2Q9Y2U5 619 aa15.77■□□□□ 0.11
PRAME-203ENST00000402697 COL5A2P05997 1499 aaPredicted RBP15.76■□□□□ 0.11
PRAME-203ENST00000402697 KDM6AO15550 1401 aaPredicted RBP15.76■□□□□ 0.11
PRAME-203ENST00000402697 BRD1O95696 1058 aa15.76■□□□□ 0.11
PRAME-203ENST00000402697 RAPGEF4Q8WZA2 1011 aa15.76■□□□□ 0.11
PRAME-203ENST00000402697 ECHDC1Q9NTX5 307 aa15.76■□□□□ 0.11
PRAME-203ENST00000402697 SPG7Q9UQ90 795 aa15.76■□□□□ 0.11
PRAME-203ENST00000402697 CCDC173Q0VFZ6 552 aa15.75■□□□□ 0.11
PRAME-203ENST00000402697 OS9Q13438 667 aaPredicted RBP15.75■□□□□ 0.11
PRAME-203ENST00000402697 TSHZ3Q63HK5 1081 aa15.75■□□□□ 0.11
PRAME-203ENST00000402697 NUTM1Q86Y26 1132 aa15.75■□□□□ 0.11
PRAME-203ENST00000402697 ZGPATQ8N5A5 531 aaKnown RBP15.75■□□□□ 0.11
PRAME-203ENST00000402697 CSB-PGBD3P0DP91 1061 aa15.75■□□□□ 0.11
PRAME-203ENST00000402697 LARP1Q6PKG0 1096 aaKnown RBP15.75■□□□□ 0.11
PRAME-203ENST00000402697 UNC5CLQ8IV45 518 aa15.75■□□□□ 0.11
PRAME-203ENST00000402697 ZDHHC9Q9Y397 364 aa15.75■□□□□ 0.11
PRAME-203ENST00000402697 AHDC1Q5TGY3 1603 aaPredicted RBP15.75■□□□□ 0.11
PRAME-203ENST00000402697 MRC1P22897 1456 aa15.74■□□□□ 0.11
PRAME-203ENST00000402697 GRM8O00222 908 aa15.74■□□□□ 0.11
PRAME-203ENST00000402697 PRDM11Q9NQV5 511 aa15.74■□□□□ 0.11
PRAME-203ENST00000402697 COL15A1P39059 1388 aa15.74■□□□□ 0.11
PRAME-203ENST00000402697 SHANK3Q9BYB0 1731 aa15.74■□□□□ 0.11
PRAME-203ENST00000402697 TATP17735 454 aaPredicted RBP15.74■□□□□ 0.11
PRAME-203ENST00000402697 EVI5LQ96CN4 794 aa15.74■□□□□ 0.11
PRAME-203ENST00000402697 PANK2Q9BZ23 570 aa15.74■□□□□ 0.11
PRAME-203ENST00000402697 TM6SF1Q9BZW5 370 aa15.74■□□□□ 0.11
PRAME-203ENST00000402697 PALD1Q9ULE6 856 aa15.74■□□□□ 0.11
PRAME-203ENST00000402697 WDR33Q9C0J8 1336 aaKnown RBP15.73■□□□□ 0.11
PRAME-203ENST00000402697 IFIT2P09913 472 aaKnown RBP15.73■□□□□ 0.11
PRAME-203ENST00000402697 CLCN1P35523 988 aa15.73■□□□□ 0.11
PRAME-203ENST00000402697 NEXNQ0ZGT2 675 aa15.73■□□□□ 0.11
PRAME-203ENST00000402697 GAS2L3Q86XJ1 694 aa15.73■□□□□ 0.11
PRAME-203ENST00000402697 KCNB2Q92953 911 aa15.73■□□□□ 0.11
PRAME-203ENST00000402697 PPP1R9BQ96SB3 815 aa15.73■□□□□ 0.11
PRAME-203ENST00000402697 LSG1Q9H089 658 aaKnown RBP15.73■□□□□ 0.11
PRAME-203ENST00000402697 SLC52A2Q9HAB3 445 aa15.73■□□□□ 0.11
PRAME-203ENST00000402697 WDR17Q8IZU2 1322 aa15.73■□□□□ 0.11
PRAME-203ENST00000402697 COL22A1Q8NFW1 1626 aaPredicted RBP15.73■□□□□ 0.11
PRAME-203ENST00000402697 C5P01031 1676 aa15.72■□□□□ 0.11
PRAME-203ENST00000402697 ZNF790Q6PG37 636 aa15.72■□□□□ 0.11
PRAME-203ENST00000402697 TRIM44Q96DX7 344 aaPredicted RBP15.72■□□□□ 0.11
PRAME-203ENST00000402697 DIAPH3Q9NSV4 1193 aa15.72■□□□□ 0.11
PRAME-203ENST00000402697 PRAMEF22A3QJZ6 481 aa15.72■□□□□ 0.11
PRAME-203ENST00000402697 ANXA1P04083 346 aa15.72■□□□□ 0.11
PRAME-203ENST00000402697 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.72■□□□□ 0.11
PRAME-203ENST00000402697 PHKG2P15735 406 aa15.71■□□□□ 0.11
PRAME-203ENST00000402697 NASPP49321 788 aaPredicted RBP15.71■□□□□ 0.11
PRAME-203ENST00000402697 G3BP1Q13283 466 aaKnown RBP eCLIP15.71■□□□□ 0.11
PRAME-203ENST00000402697 IFNL2Q8IZJ0 200 aa15.71■□□□□ 0.11
PRAME-203ENST00000402697 SYAP1Q96A49 352 aaPredicted RBP15.71■□□□□ 0.11
PRAME-203ENST00000402697 ZSCAN31Q96LW9 406 aaPredicted RBP15.71■□□□□ 0.11
PRAME-203ENST00000402697 SNRKQ9NRH2 765 aa15.71■□□□□ 0.11
PRAME-203ENST00000402697 PKP1Q13835 747 aa15.71■□□□□ 0.1
PRAME-203ENST00000402697 PRPF40AO75400 957 aaKnown RBP15.7■□□□□ 0.1
PRAME-203ENST00000402697 ZSCAN23Q3MJ62 389 aa15.7■□□□□ 0.1
PRAME-203ENST00000402697 HS1BP3Q53T59 392 aa15.7■□□□□ 0.1
PRAME-203ENST00000402697 TICAM2Q86XR7 235 aa15.7■□□□□ 0.1
PRAME-203ENST00000402697 DCAF5Q96JK2 942 aa15.7■□□□□ 0.1
PRAME-203ENST00000402697 TTC14Q96N46 770 aa15.7■□□□□ 0.1
PRAME-203ENST00000402697 LIMCH1Q9UPQ0 1083 aa15.7■□□□□ 0.1
PRAME-203ENST00000402697 SNX14Q9Y5W7 946 aa15.7■□□□□ 0.1
PRAME-203ENST00000402697 PDIA6Q15084 440 aa15.69■□□□□ 0.1
PRAME-203ENST00000402697 SH2B1Q9NRF2 756 aaPredicted RBP15.69■□□□□ 0.1
PRAME-203ENST00000402697 ATP6V1DQ9Y5K8 247 aa15.69■□□□□ 0.1
PRAME-203ENST00000402697 COL16A1Q07092 1604 aaPredicted RBP15.69■□□□□ 0.1
PRAME-203ENST00000402697 CYP27B1O15528 508 aa15.69■□□□□ 0.1
PRAME-203ENST00000402697 CAVIN1Q6NZI2 390 aaKnown RBP15.69■□□□□ 0.1
PRAME-203ENST00000402697 RIC3Q7Z5B4 369 aa15.69■□□□□ 0.1
PRAME-203ENST00000402697 ERBB4Q15303 1308 aa15.69■□□□□ 0.1
PRAME-203ENST00000402697 GLI3P10071 1580 aa15.68■□□□□ 0.1
PRAME-203ENST00000402697 PHF14O94880 888 aa15.68■□□□□ 0.1
PRAME-203ENST00000402697 NCLP19338 710 aaKnown RBP15.68■□□□□ 0.1
PRAME-203ENST00000402697 PROSER3Q2NL68 480 aa15.68■□□□□ 0.1
PRAME-203ENST00000402697 VPS53Q5VIR6 699 aa15.68■□□□□ 0.1
PRAME-203ENST00000402697 METTL22Q9BUU2 404 aaPredicted RBP15.68■□□□□ 0.1
PRAME-203ENST00000402697 RRAGDQ9NQL2 400 aaPredicted RBP15.68■□□□□ 0.1
PRAME-203ENST00000402697 COL14A1Q05707 1796 aaKnown RBP15.68■□□□□ 0.1
PRAME-203ENST00000402697 SNRPA1P09661 255 aaKnown RBP15.67■□□□□ 0.1
PRAME-203ENST00000402697 SLC39A6Q13433 755 aa15.67■□□□□ 0.1
PRAME-203ENST00000402697 TMEM87AQ8NBN3 555 aa15.67■□□□□ 0.1
PRAME-203ENST00000402697 ARXQ96QS3 562 aa15.67■□□□□ 0.1
PRAME-203ENST00000402697 ESPNB1AK53 854 aa15.67■□□□□ 0.1
PRAME-203ENST00000402697 ZKSCAN1P17029 563 aaPredicted RBP15.67■□□□□ 0.1
PRAME-203ENST00000402697 RFX7Q2KHR2 1363 aa15.67■□□□□ 0.1
PRAME-203ENST00000402697 SUCLG2Q96I99 432 aa15.67■□□□□ 0.1
PRAME-203ENST00000402697 LRSAM1Q6UWE0 723 aa15.66■□□□□ 0.1
PRAME-203ENST00000402697 CWC27Q6UX04 472 aaKnown RBP15.66■□□□□ 0.1
PRAME-203ENST00000402697 AACSQ86V21 672 aa15.66■□□□□ 0.1
PRAME-203ENST00000402697 UPF3BQ9BZI7 483 aaKnown RBP15.66■□□□□ 0.1
PRAME-203ENST00000402697 NEURL1BA8MQ27 555 aa15.66■□□□□ 0.1
PRAME-203ENST00000402697 PSMA5P28066 241 aa15.66■□□□□ 0.1
PRAME-203ENST00000402697 GCKRQ14397 625 aa15.66■□□□□ 0.1
PRAME-203ENST00000402697 CSPP1Q1MSJ5 1256 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms