RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 STK3Q13188 491 aa9.23□□□□□ -0.93
HDAC9-201ENST00000401921 NFATC2IPQ8NCF5 419 aa9.23□□□□□ -0.93
HDAC9-201ENST00000401921 NEUROD6Q96NK8 337 aa9.23□□□□□ -0.93
HDAC9-201ENST00000401921 PDRG1Q9NUG6 133 aa9.23□□□□□ -0.93
HDAC9-201ENST00000401921 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.23□□□□□ -0.93
HDAC9-201ENST00000401921 NCOA3Q9Y6Q9 1424 aa9.23□□□□□ -0.93
HDAC9-201ENST00000401921 ATP5J2-PTCD1G3V325 749 aa9.23□□□□□ -0.93
HDAC9-201ENST00000401921 PTCD1O75127 700 aaKnown RBP9.23□□□□□ -0.93
HDAC9-201ENST00000401921 HSP90B1P14625 803 aaKnown RBP9.23□□□□□ -0.93
HDAC9-201ENST00000401921 ERC1Q8IUD2 1116 aa9.23□□□□□ -0.93
HDAC9-201ENST00000401921 RBSNQ9H1K0 784 aa9.23□□□□□ -0.93
HDAC9-201ENST00000401921 BABAM1Q9NWV8 329 aa9.23□□□□□ -0.93
HDAC9-201ENST00000401921 CYP46A1Q9Y6A2 500 aa9.23□□□□□ -0.93
HDAC9-201ENST00000401921 GRM8O00222 908 aa9.23□□□□□ -0.93
HDAC9-201ENST00000401921 AK2P54819 239 aa9.23□□□□□ -0.93
HDAC9-201ENST00000401921 COPS6Q7L5N1 327 aa9.23□□□□□ -0.93
HDAC9-201ENST00000401921 FERMT3Q86UX7 667 aa9.23□□□□□ -0.93
HDAC9-201ENST00000401921 IL25Q9H293 177 aa9.23□□□□□ -0.93
HDAC9-201ENST00000401921 HYPKQ9NX55 129 aa9.23□□□□□ -0.93
HDAC9-201ENST00000401921 LIMCH1Q9UPQ0 1083 aa9.23□□□□□ -0.93
HDAC9-201ENST00000401921 RIMS1Q86UR5 1692 aaKnown RBP9.23□□□□□ -0.93
HDAC9-201ENST00000401921 SGSM2O43147 1006 aa9.22□□□□□ -0.93
HDAC9-201ENST00000401921 NPM3O75607 178 aaKnown RBP9.22□□□□□ -0.93
HDAC9-201ENST00000401921 GPT2Q8TD30 523 aa9.22□□□□□ -0.93
HDAC9-201ENST00000401921 TMEM63CQ9P1W3 806 aa9.22□□□□□ -0.93
HDAC9-201ENST00000401921 STAP2Q9UGK3 403 aa9.22□□□□□ -0.93
HDAC9-201ENST00000401921 NSFL1CQ9UNZ2 370 aaKnown RBP9.22□□□□□ -0.93
HDAC9-201ENST00000401921 ZDHHC9Q9Y397 364 aa9.22□□□□□ -0.93
HDAC9-201ENST00000401921 GIGYF1O75420 1035 aaPredicted RBP9.22□□□□□ -0.93
HDAC9-201ENST00000401921 FOSBP53539 338 aa9.22□□□□□ -0.93
HDAC9-201ENST00000401921 RASEFQ8IZ41 740 aa9.22□□□□□ -0.93
HDAC9-201ENST00000401921 NECAB1Q8N987 351 aa9.22□□□□□ -0.93
HDAC9-201ENST00000401921 XAGE3Q8WTP9 111 aa9.22□□□□□ -0.93
HDAC9-201ENST00000401921 BICC1Q9H694 974 aaKnown RBP9.22□□□□□ -0.93
HDAC9-201ENST00000401921 PRDM4Q9UKN5 801 aa9.22□□□□□ -0.93
HDAC9-201ENST00000401921 SNX14Q9Y5W7 946 aa9.22□□□□□ -0.93
HDAC9-201ENST00000401921 MON2Q7Z3U7 1717 aa9.22□□□□□ -0.93
HDAC9-201ENST00000401921 C3P01024 1663 aa9.22□□□□□ -0.93
HDAC9-201ENST00000401921 REREQ9P2R6 1566 aa9.22□□□□□ -0.93
HDAC9-201ENST00000401921 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.22□□□□□ -0.93
HDAC9-201ENST00000401921 PHF14O94880 888 aa9.22□□□□□ -0.93
HDAC9-201ENST00000401921 LARP1Q6PKG0 1096 aaKnown RBP9.22□□□□□ -0.93
HDAC9-201ENST00000401921 TSPY26PQ9H489 355 aa9.22□□□□□ -0.93
HDAC9-201ENST00000401921 ATP6V1DQ9Y5K8 247 aa9.22□□□□□ -0.93
HDAC9-201ENST00000401921 USP48Q86UV5 1035 aa9.21□□□□□ -0.93
HDAC9-201ENST00000401921 SUCLG2Q96I99 432 aa9.21□□□□□ -0.93
HDAC9-201ENST00000401921 CNPY2Q9Y2B0 182 aa9.21□□□□□ -0.93
HDAC9-201ENST00000401921 HSPA4P34932 840 aa9.21□□□□□ -0.94
HDAC9-201ENST00000401921 CABP4P57796 275 aa9.21□□□□□ -0.94
HDAC9-201ENST00000401921 RNF20Q5VTR2 975 aa9.21□□□□□ -0.94
HDAC9-201ENST00000401921 UBE3BQ7Z3V4 1068 aa9.21□□□□□ -0.94
HDAC9-201ENST00000401921 LINS1Q8NG48 757 aa9.21□□□□□ -0.94
HDAC9-201ENST00000401921 AXIN2Q9Y2T1 843 aa9.21□□□□□ -0.94
HDAC9-201ENST00000401921 GADD45BO75293 160 aaPredicted RBP9.2□□□□□ -0.94
HDAC9-201ENST00000401921 ALDH1L1O75891 902 aa9.2□□□□□ -0.94
HDAC9-201ENST00000401921 PTH1RQ03431 593 aa9.2□□□□□ -0.94
HDAC9-201ENST00000401921 ZSCAN30Q86W11 494 aa9.2□□□□□ -0.94
HDAC9-201ENST00000401921 FAM227BQ96M60 508 aa9.2□□□□□ -0.94
HDAC9-201ENST00000401921 NDUFB9Q9Y6M9 179 aa9.2□□□□□ -0.94
HDAC9-201ENST00000401921 DIP2AQ14689 1571 aa9.2□□□□□ -0.94
HDAC9-201ENST00000401921 STX6O43752 255 aa9.2□□□□□ -0.94
HDAC9-201ENST00000401921 BRD1O95696 1058 aa9.2□□□□□ -0.94
HDAC9-201ENST00000401921 TPM2P07951 284 aa9.2□□□□□ -0.94
HDAC9-201ENST00000401921 GJB2P29033 226 aa9.2□□□□□ -0.94
HDAC9-201ENST00000401921 TAF7LQ5H9L4 462 aa9.2□□□□□ -0.94
HDAC9-201ENST00000401921 LARP1BQ659C4 914 aaKnown RBP9.2□□□□□ -0.94
HDAC9-201ENST00000401921 LRSAM1Q6UWE0 723 aa9.2□□□□□ -0.94
HDAC9-201ENST00000401921 ARHGEF25Q86VW2 580 aa9.2□□□□□ -0.94
HDAC9-201ENST00000401921 PI4K2BQ8TCG2 481 aa9.2□□□□□ -0.94
HDAC9-201ENST00000401921 EVI5LQ96CN4 794 aa9.2□□□□□ -0.94
HDAC9-201ENST00000401921 ARID3AQ99856 593 aa9.2□□□□□ -0.94
HDAC9-201ENST00000401921 UBR1Q8IWV7 1749 aa9.2□□□□□ -0.94
HDAC9-201ENST00000401921 SSH2Q76I76 1423 aa9.2□□□□□ -0.94
HDAC9-201ENST00000401921 HOXB7P09629 217 aa9.2□□□□□ -0.94
HDAC9-201ENST00000401921 GORABQ5T7V8 394 aa9.2□□□□□ -0.94
HDAC9-201ENST00000401921 BLOC1S2Q6QNY1 142 aa9.2□□□□□ -0.94
HDAC9-201ENST00000401921 EDC3Q96F86 508 aaKnown RBP9.2□□□□□ -0.94
HDAC9-201ENST00000401921 INTS4Q96HW7 963 aaKnown RBP9.2□□□□□ -0.94
HDAC9-201ENST00000401921 DDX21Q9NR30 783 aaKnown RBP eCLIP9.2□□□□□ -0.94
HDAC9-201ENST00000401921 RBM8AQ9Y5S9 174 aaKnown RBP9.2□□□□□ -0.94
HDAC9-201ENST00000401921 KNDC1Q76NI1 1749 aa9.19□□□□□ -0.94
HDAC9-201ENST00000401921 RAD50Q92878 1312 aa9.19□□□□□ -0.94
HDAC9-201ENST00000401921 KAT6BQ8WYB5 2073 aa9.19□□□□□ -0.94
HDAC9-201ENST00000401921 A0A087WZG4 1122 aa9.19□□□□□ -0.94
HDAC9-201ENST00000401921 ZNF445P59923 1031 aa9.19□□□□□ -0.94
HDAC9-201ENST00000401921 NMIQ13287 307 aaPredicted RBP9.19□□□□□ -0.94
HDAC9-201ENST00000401921 ZNF790Q6PG37 636 aa9.19□□□□□ -0.94
HDAC9-201ENST00000401921 ANKRD13DQ6ZTN6 518 aa9.19□□□□□ -0.94
HDAC9-201ENST00000401921 R3HCC1Q9Y3T6 440 aaKnown RBP9.19□□□□□ -0.94
HDAC9-201ENST00000401921 PEAK1Q9H792 1746 aa9.19□□□□□ -0.94
HDAC9-201ENST00000401921 ERBB4Q15303 1308 aa9.19□□□□□ -0.94
HDAC9-201ENST00000401921 SETD1AO15047 1707 aaKnown RBP9.19□□□□□ -0.94
HDAC9-201ENST00000401921 CYP2E1P05181 493 aaPredicted RBP9.19□□□□□ -0.94
HDAC9-201ENST00000401921 SYT1P21579 422 aa9.19□□□□□ -0.94
HDAC9-201ENST00000401921 POLA2Q14181 598 aa9.19□□□□□ -0.94
HDAC9-201ENST00000401921 EAF2Q96CJ1 260 aaPredicted RBP9.19□□□□□ -0.94
HDAC9-201ENST00000401921 CCDC85AQ96PX6 553 aaPredicted RBP9.19□□□□□ -0.94
HDAC9-201ENST00000401921 AKAP12Q02952 1782 aa9.19□□□□□ -0.94
HDAC9-201ENST00000401921 PSMA5P28066 241 aa9.18□□□□□ -0.94
HDAC9-201ENST00000401921 ADCK5Q3MIX3 580 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms