RNA–Protein interactions for RNA: ENST00000401605.5

CLIP4-202, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2 BASIC

Gene CLIP4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-202ENST00000401605 GGNBP2Q9H3C7 697 aa7.72□□□□□ -1.17
CLIP4-202ENST00000401605 SH3BP1Q9Y3L3 701 aa7.72□□□□□ -1.17
CLIP4-202ENST00000401605 RTL1A6NKG5 1358 aa7.71□□□□□ -1.17
CLIP4-202ENST00000401605 TPM2P07951 284 aa7.71□□□□□ -1.18
CLIP4-202ENST00000401605 FBLN1P23142 703 aa7.71□□□□□ -1.18
CLIP4-202ENST00000401605 DNTTIP2Q5QJE6 756 aaKnown RBP7.71□□□□□ -1.18
CLIP4-202ENST00000401605 STK32BQ9NY57 414 aa7.71□□□□□ -1.18
CLIP4-202ENST00000401605 PEAK1Q9H792 1746 aa7.71□□□□□ -1.18
CLIP4-202ENST00000401605 TCERG1O14776 1098 aaKnown RBP7.7□□□□□ -1.18
CLIP4-202ENST00000401605 RRS1Q15050 365 aaKnown RBP7.7□□□□□ -1.18
CLIP4-202ENST00000401605 HSP90AB3PQ58FF7 597 aa7.7□□□□□ -1.18
CLIP4-202ENST00000401605 EXOC8Q8IYI6 725 aa7.7□□□□□ -1.18
CLIP4-202ENST00000401605 DDX54Q8TDD1 881 aaKnown RBP7.7□□□□□ -1.18
CLIP4-202ENST00000401605 DRC1Q96MC2 740 aa7.7□□□□□ -1.18
CLIP4-202ENST00000401605 PNNQ9H307 717 aaKnown RBP7.7□□□□□ -1.18
CLIP4-202ENST00000401605 YY1AP1Q9H869 796 aa7.7□□□□□ -1.18
CLIP4-202ENST00000401605 PPP1R1BQ9UD71 204 aaPredicted RBP7.7□□□□□ -1.18
CLIP4-202ENST00000401605 USP54Q70EL1 1684 aa7.7□□□□□ -1.18
CLIP4-202ENST00000401605 KIF20AO95235 890 aa7.7□□□□□ -1.18
CLIP4-202ENST00000401605 ABL2P42684 1182 aa7.7□□□□□ -1.18
CLIP4-202ENST00000401605 SLC20A2Q08357 652 aa7.7□□□□□ -1.18
CLIP4-202ENST00000401605 SLC15A2Q16348 729 aa7.7□□□□□ -1.18
CLIP4-202ENST00000401605 MTMR14Q8NCE2 650 aa7.7□□□□□ -1.18
CLIP4-202ENST00000401605 ADAMTS19Q8TE59 1207 aa7.7□□□□□ -1.18
CLIP4-202ENST00000401605 GRXCR2A6NFK2 248 aa7.69□□□□□ -1.18
CLIP4-202ENST00000401605 SMG6Q86US8 1419 aaKnown RBP7.69□□□□□ -1.18
CLIP4-202ENST00000401605 KIF24Q5T7B8 1368 aa7.69□□□□□ -1.18
CLIP4-202ENST00000401605 CGNL1Q0VF96 1302 aa7.69□□□□□ -1.18
CLIP4-202ENST00000401605 TCF3P15923 654 aa7.69□□□□□ -1.18
CLIP4-202ENST00000401605 MS4A4AQ96JQ5 239 aa7.69□□□□□ -1.18
CLIP4-202ENST00000401605 ZCRB1Q8TBF4 217 aaKnown RBP7.68□□□□□ -1.18
CLIP4-202ENST00000401605 SREK1Q8WXA9 508 aaKnown RBP7.68□□□□□ -1.18
CLIP4-202ENST00000401605 CARD14Q9BXL6 1004 aa7.68□□□□□ -1.18
CLIP4-202ENST00000401605 VRTNQ9H8Y1 702 aa7.68□□□□□ -1.18
CLIP4-202ENST00000401605 RREB1Q92766 1687 aa7.68□□□□□ -1.18
CLIP4-202ENST00000401605 INSRP06213 1382 aa7.68□□□□□ -1.18
CLIP4-202ENST00000401605 ZBTB7AO95365 584 aa7.68□□□□□ -1.18
CLIP4-202ENST00000401605 ZNF16P17020 682 aaPredicted RBP7.68□□□□□ -1.18
CLIP4-202ENST00000401605 NOM1Q5C9Z4 860 aaKnown RBP7.68□□□□□ -1.18
CLIP4-202ENST00000401605 NBPF6Q5VWK0 638 aa7.68□□□□□ -1.18
CLIP4-202ENST00000401605 RAPGEF4Q8WZA2 1011 aa7.68□□□□□ -1.18
CLIP4-202ENST00000401605 NBPF4Q96M43 638 aa7.68□□□□□ -1.18
CLIP4-202ENST00000401605 GEMIN8Q9NWZ8 242 aaKnown RBP7.68□□□□□ -1.18
CLIP4-202ENST00000401605 FLT4P35916 1363 aa7.67□□□□□ -1.18
CLIP4-202ENST00000401605 TMEM88BA6NKF7 163 aa7.67□□□□□ -1.18
CLIP4-202ENST00000401605 RFC5P40937 340 aa7.67□□□□□ -1.18
CLIP4-202ENST00000401605 HIC1Q14526 733 aa7.67□□□□□ -1.18
CLIP4-202ENST00000401605 NBPF9Q3BBW0 867 aa7.67□□□□□ -1.18
CLIP4-202ENST00000401605 HSP90AB2PQ58FF8 381 aa7.67□□□□□ -1.18
CLIP4-202ENST00000401605 SLC27A3Q5K4L6 730 aa7.67□□□□□ -1.18
CLIP4-202ENST00000401605 PPP1R15BQ5SWA1 713 aa7.67□□□□□ -1.18
CLIP4-202ENST00000401605 SYTL4Q96C24 671 aaPredicted RBP7.67□□□□□ -1.18
CLIP4-202ENST00000401605 PDGFDQ9GZP0 370 aaPredicted RBP7.67□□□□□ -1.18
CLIP4-202ENST00000401605 MTFR1LQ9H019 292 aa7.67□□□□□ -1.18
CLIP4-202ENST00000401605 NSD3Q9BZ95 1437 aa7.67□□□□□ -1.18
CLIP4-202ENST00000401605 NUP188Q5SRE5 1749 aa7.67□□□□□ -1.18
CLIP4-202ENST00000401605 TATP17735 454 aaPredicted RBP7.67□□□□□ -1.18
CLIP4-202ENST00000401605 PRIM1P49642 420 aaKnown RBP7.66□□□□□ -1.18
CLIP4-202ENST00000401605 EIF4G2P78344 907 aaKnown RBP eCLIP7.66□□□□□ -1.18
CLIP4-202ENST00000401605 DMTNQ08495 405 aa7.66□□□□□ -1.18
CLIP4-202ENST00000401605 DNAJC14Q6Y2X3 702 aaPredicted RBP7.66□□□□□ -1.18
CLIP4-202ENST00000401605 TBC1D2BQ9UPU7 963 aa7.66□□□□□ -1.18
CLIP4-202ENST00000401605 RGPD3A6NKT7 1758 aaPredicted RBP7.66□□□□□ -1.18
CLIP4-202ENST00000401605 RGPD4Q7Z3J3 1758 aa7.66□□□□□ -1.18
CLIP4-202ENST00000401605 MEGF6O75095 1541 aa7.66□□□□□ -1.18
CLIP4-202ENST00000401605 PTGER2P43116 358 aa7.66□□□□□ -1.18
CLIP4-202ENST00000401605 ANKRD13AQ8IZ07 590 aa7.66□□□□□ -1.18
CLIP4-202ENST00000401605 USHBP1Q8N6Y0 703 aa7.66□□□□□ -1.18
CLIP4-202ENST00000401605 BEGAINQ9BUH8 593 aa7.66□□□□□ -1.18
CLIP4-202ENST00000401605 LRRC4BQ9NT99 713 aa7.66□□□□□ -1.18
CLIP4-202ENST00000401605 ZHX1Q9UKY1 873 aaPredicted RBP7.66□□□□□ -1.18
CLIP4-202ENST00000401605 EMILIN1Q9Y6C2 1016 aa7.66□□□□□ -1.18
CLIP4-202ENST00000401605 SEMA3FQ13275 785 aa7.65□□□□□ -1.18
CLIP4-202ENST00000401605 TSHZ1Q6ZSZ6 1077 aa7.65□□□□□ -1.18
CLIP4-202ENST00000401605 OTUD6BQ8N6M0 293 aa7.65□□□□□ -1.18
CLIP4-202ENST00000401605 TMUB1Q9BVT8 246 aa7.65□□□□□ -1.18
CLIP4-202ENST00000401605 PCDH11XQ9BZA7 1347 aa7.65□□□□□ -1.19
CLIP4-202ENST00000401605 PCDH11YQ9BZA8 1340 aa7.65□□□□□ -1.19
CLIP4-202ENST00000401605 SPDYE16A6NNV3 312 aaPredicted RBP7.64□□□□□ -1.19
CLIP4-202ENST00000401605 ZNF827Q17R98 1081 aa7.64□□□□□ -1.19
CLIP4-202ENST00000401605 RINLQ6ZS11 566 aa7.64□□□□□ -1.19
CLIP4-202ENST00000401605 WNK3Q9BYP7 1800 aa7.64□□□□□ -1.19
CLIP4-202ENST00000401605 GOLGA6L3A6NEY3 463 aa7.64□□□□□ -1.19
CLIP4-202ENST00000401605 HMGB2P26583 209 aaKnown RBP7.64□□□□□ -1.19
CLIP4-202ENST00000401605 HDGFL1Q5TGJ6 251 aa7.64□□□□□ -1.19
CLIP4-202ENST00000401605 MYSM1Q5VVJ2 828 aa7.64□□□□□ -1.19
CLIP4-202ENST00000401605 MTERF4Q7Z6M4 381 aaKnown RBP7.64□□□□□ -1.19
CLIP4-202ENST00000401605 BANK1Q8NDB2 785 aa7.64□□□□□ -1.19
CLIP4-202ENST00000401605 AKT1S1Q96B36 256 aa7.64□□□□□ -1.19
CLIP4-202ENST00000401605 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.64□□□□□ -1.19
CLIP4-202ENST00000401605 LOC102724159A0A0B4J2E5 919 aa7.63□□□□□ -1.19
CLIP4-202ENST00000401605 ANKRD62A6NC57 917 aa7.63□□□□□ -1.19
CLIP4-202ENST00000401605 CLCN1P35523 988 aa7.63□□□□□ -1.19
CLIP4-202ENST00000401605 MDM2Q00987 491 aaPredicted RBP7.63□□□□□ -1.19
CLIP4-202ENST00000401605 PWP2Q15269 919 aaKnown RBP7.63□□□□□ -1.19
CLIP4-202ENST00000401605 SLC16A10Q8TF71 515 aa7.63□□□□□ -1.19
CLIP4-202ENST00000401605 IPO9Q96P70 1041 aaKnown RBP7.63□□□□□ -1.19
CLIP4-202ENST00000401605 PHOX2BQ99453 314 aa7.63□□□□□ -1.19
CLIP4-202ENST00000401605 NSD2O96028 1365 aa7.63□□□□□ -1.19
CLIP4-202ENST00000401605 NHSQ6T4R5 1651 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms