RNA–Protein interactions for RNA: ENST00000400946.2

LINC01139-201, Transcript of long intergenic non-protein coding RNA 1139, humanhuman

TSL 1 (best) BASIC

Gene LINC01139, Length 1,537 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01139-201ENST00000400946 BEND3Q5T5X7 828 aa10.6□□□□□ -0.71
LINC01139-201ENST00000400946 CADPS2Q86UW7 1296 aa10.6□□□□□ -0.71
LINC01139-201ENST00000400946 GAS2L3Q86XJ1 694 aa10.6□□□□□ -0.71
LINC01139-201ENST00000400946 CNTROBQ8N137 903 aa10.6□□□□□ -0.71
LINC01139-201ENST00000400946 RHPN1Q8TCX5 695 aa10.6□□□□□ -0.71
LINC01139-201ENST00000400946 PANK2Q9BZ23 570 aa10.6□□□□□ -0.71
LINC01139-201ENST00000400946 ROBO1Q9Y6N7 1651 aa10.6□□□□□ -0.71
LINC01139-201ENST00000400946 SIPA1L3O60292 1781 aaPredicted RBP10.59□□□□□ -0.71
LINC01139-201ENST00000400946 GALR2O43603 387 aaPredicted RBP10.59□□□□□ -0.71
LINC01139-201ENST00000400946 GLRX3O76003 335 aaKnown RBP10.59□□□□□ -0.71
LINC01139-201ENST00000400946 ATF3P18847 181 aa10.59□□□□□ -0.71
LINC01139-201ENST00000400946 NASPP49321 788 aaPredicted RBP10.59□□□□□ -0.71
LINC01139-201ENST00000400946 MCTP1Q6DN14 999 aa10.59□□□□□ -0.71
LINC01139-201ENST00000400946 RUFY2Q8WXA3 655 aa10.59□□□□□ -0.71
LINC01139-201ENST00000400946 SYAP1Q96A49 352 aaPredicted RBP10.59□□□□□ -0.71
LINC01139-201ENST00000400946 DCCP43146 1447 aa10.59□□□□□ -0.71
LINC01139-201ENST00000400946 RAD50Q92878 1312 aa10.59□□□□□ -0.71
LINC01139-201ENST00000400946 TRIM6-TRIM34B2RNG4 842 aa10.58□□□□□ -0.72
LINC01139-201ENST00000400946 APBB1O00213 710 aa10.58□□□□□ -0.72
LINC01139-201ENST00000400946 SURF6O75683 361 aaKnown RBP10.58□□□□□ -0.72
LINC01139-201ENST00000400946 TEFQ10587 303 aa10.58□□□□□ -0.72
LINC01139-201ENST00000400946 PPP1R42Q7Z4L9 355 aa10.58□□□□□ -0.72
LINC01139-201ENST00000400946 ZDHHC9Q9Y397 364 aa10.58□□□□□ -0.72
LINC01139-201ENST00000400946 UTYO14607 1347 aa10.58□□□□□ -0.72
LINC01139-201ENST00000400946 WDR33Q9C0J8 1336 aaKnown RBP10.58□□□□□ -0.72
LINC01139-201ENST00000400946 HIP1O00291 1037 aa10.58□□□□□ -0.72
LINC01139-201ENST00000400946 SGSM2O43147 1006 aa10.58□□□□□ -0.72
LINC01139-201ENST00000400946 PHF14O94880 888 aa10.58□□□□□ -0.72
LINC01139-201ENST00000400946 TMEM132AQ24JP5 1023 aa10.58□□□□□ -0.72
LINC01139-201ENST00000400946 PI4K2BQ8TCG2 481 aa10.58□□□□□ -0.72
LINC01139-201ENST00000400946 GPATCH3Q96I76 525 aa10.58□□□□□ -0.72
LINC01139-201ENST00000400946 TM6SF1Q9BZW5 370 aa10.58□□□□□ -0.72
LINC01139-201ENST00000400946 ANO2Q9NQ90 1003 aa10.58□□□□□ -0.72
LINC01139-201ENST00000400946 HYPKQ9NX55 129 aa10.58□□□□□ -0.72
LINC01139-201ENST00000400946 FBXO3Q9UK99 471 aa10.58□□□□□ -0.72
LINC01139-201ENST00000400946 MCM5P33992 734 aa10.57□□□□□ -0.72
LINC01139-201ENST00000400946 PSME1Q06323 249 aa10.57□□□□□ -0.72
LINC01139-201ENST00000400946 ZSCAN23Q3MJ62 389 aa10.57□□□□□ -0.72
LINC01139-201ENST00000400946 NBPF6Q5VWK0 638 aa10.57□□□□□ -0.72
LINC01139-201ENST00000400946 KIAA1211Q6ZU35 1233 aa10.57□□□□□ -0.72
LINC01139-201ENST00000400946 ARHGEF25Q86VW2 580 aa10.57□□□□□ -0.72
LINC01139-201ENST00000400946 ZGPATQ8N5A5 531 aaKnown RBP10.57□□□□□ -0.72
LINC01139-201ENST00000400946 TMEM87AQ8NBN3 555 aa10.57□□□□□ -0.72
LINC01139-201ENST00000400946 KCNB2Q92953 911 aa10.57□□□□□ -0.72
LINC01139-201ENST00000400946 RILPL2Q969X0 211 aa10.57□□□□□ -0.72
LINC01139-201ENST00000400946 NBPF4Q96M43 638 aa10.57□□□□□ -0.72
LINC01139-201ENST00000400946 TRPM3Q9HCF6 1732 aaPredicted RBP10.57□□□□□ -0.72
LINC01139-201ENST00000400946 BTBD11A6QL63 1104 aa10.56□□□□□ -0.72
LINC01139-201ENST00000400946 RNMTO43148 476 aaKnown RBP10.56□□□□□ -0.72
LINC01139-201ENST00000400946 SRGAP3O43295 1099 aa10.56□□□□□ -0.72
LINC01139-201ENST00000400946 DDX58O95786 925 aaKnown RBP10.56□□□□□ -0.72
LINC01139-201ENST00000400946 TERF1P54274 439 aa10.56□□□□□ -0.72
LINC01139-201ENST00000400946 C1orf141Q5JVX7 400 aa10.56□□□□□ -0.72
LINC01139-201ENST00000400946 KSR2Q6VAB6 950 aa10.56□□□□□ -0.72
LINC01139-201ENST00000400946 TICAM2Q86XR7 235 aa10.56□□□□□ -0.72
LINC01139-201ENST00000400946 CLASRPQ8N2M8 674 aaKnown RBP10.56□□□□□ -0.72
LINC01139-201ENST00000400946 PDLIM2Q96JY6 352 aa10.56□□□□□ -0.72
LINC01139-201ENST00000400946 PHAXQ9H814 394 aaKnown RBP10.56□□□□□ -0.72
LINC01139-201ENST00000400946 ADCY9O60503 1353 aa10.55□□□□□ -0.72
LINC01139-201ENST00000400946 LETM1O95202 739 aaPredicted RBP10.55□□□□□ -0.72
LINC01139-201ENST00000400946 NCLP19338 710 aaKnown RBP10.55□□□□□ -0.72
LINC01139-201ENST00000400946 ZNF530Q6P9A1 599 aaPredicted RBP10.55□□□□□ -0.72
LINC01139-201ENST00000400946 LRSAM1Q6UWE0 723 aa10.55□□□□□ -0.72
LINC01139-201ENST00000400946 ZSCAN30Q86W11 494 aa10.55□□□□□ -0.72
LINC01139-201ENST00000400946 LINS1Q8NG48 757 aa10.55□□□□□ -0.72
LINC01139-201ENST00000400946 ZSCAN31Q96LW9 406 aaPredicted RBP10.55□□□□□ -0.72
LINC01139-201ENST00000400946 SNRKQ9NRH2 765 aa10.55□□□□□ -0.72
LINC01139-201ENST00000400946 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.55□□□□□ -0.72
LINC01139-201ENST00000400946 CHPF2Q9P2E5 772 aa10.55□□□□□ -0.72
LINC01139-201ENST00000400946 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.55□□□□□ -0.72
LINC01139-201ENST00000400946 ATP6V1DQ9Y5K8 247 aa10.55□□□□□ -0.72
LINC01139-201ENST00000400946 RGPD2P0DJD1 1756 aa10.55□□□□□ -0.72
LINC01139-201ENST00000400946 COL15A1P39059 1388 aa10.54□□□□□ -0.72
LINC01139-201ENST00000400946 PI4KAP2A4QPH2 592 aa10.54□□□□□ -0.72
LINC01139-201ENST00000400946 PRPF40AO75400 957 aaKnown RBP10.54□□□□□ -0.72
LINC01139-201ENST00000400946 GIGYF1O75420 1035 aaPredicted RBP10.54□□□□□ -0.72
LINC01139-201ENST00000400946 CSPP1Q1MSJ5 1256 aa10.54□□□□□ -0.72
LINC01139-201ENST00000400946 CAVIN1Q6NZI2 390 aaKnown RBP10.54□□□□□ -0.72
LINC01139-201ENST00000400946 PI4KAP1Q8N8J0 262 aa10.54□□□□□ -0.72
LINC01139-201ENST00000400946 LTV1Q96GA3 475 aaPredicted RBP10.54□□□□□ -0.72
LINC01139-201ENST00000400946 ECHDC1Q9NTX5 307 aa10.54□□□□□ -0.72
LINC01139-201ENST00000400946 GCP02774 474 aa10.53□□□□□ -0.72
LINC01139-201ENST00000400946 NBPF7P0C2Y1 421 aaPredicted RBP10.53□□□□□ -0.72
LINC01139-201ENST00000400946 BRINP3Q76B58 766 aa10.53□□□□□ -0.72
LINC01139-201ENST00000400946 FAM184AQ8NB25 1140 aa10.53□□□□□ -0.72
LINC01139-201ENST00000400946 EVI5LQ96CN4 794 aa10.53□□□□□ -0.72
LINC01139-201ENST00000400946 TTC14Q96N46 770 aa10.53□□□□□ -0.72
LINC01139-201ENST00000400946 PHF12Q96QT6 1004 aa10.53□□□□□ -0.72
LINC01139-201ENST00000400946 LSG1Q9H089 658 aaKnown RBP10.53□□□□□ -0.72
LINC01139-201ENST00000400946 LGR6Q9HBX8 967 aa10.53□□□□□ -0.72
LINC01139-201ENST00000400946 DDX21Q9NR30 783 aaKnown RBP eCLIP10.53□□□□□ -0.72
LINC01139-201ENST00000400946 SH2B1Q9NRF2 756 aaPredicted RBP10.53□□□□□ -0.72
LINC01139-201ENST00000400946 PALD1Q9ULE6 856 aa10.53□□□□□ -0.72
LINC01139-201ENST00000400946 LIMCH1Q9UPQ0 1083 aa10.53□□□□□ -0.72
LINC01139-201ENST00000400946 SCN11AQ9UI33 1791 aa10.53□□□□□ -0.72
LINC01139-201ENST00000400946 PKP1Q13835 747 aa10.53□□□□□ -0.72
LINC01139-201ENST00000400946 UVSSAQ2YD98 709 aa10.53□□□□□ -0.72
LINC01139-201ENST00000400946 ESCO1Q5FWF5 840 aa10.53□□□□□ -0.72
LINC01139-201ENST00000400946 VPS53Q5VIR6 699 aa10.53□□□□□ -0.72
LINC01139-201ENST00000400946 NUTM2GQ5VZR2 741 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms