RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 DZIP3Q86Y13 1208 aaKnown RBP16■□□□□ 0.15
LINC00544-201ENST00000400540 SETDB2Q96T68 719 aa16■□□□□ 0.15
LINC00544-201ENST00000400540 SCN4AP35499 1836 aa16■□□□□ 0.15
LINC00544-201ENST00000400540 ERFEQ4G0M1 354 aa15.99■□□□□ 0.15
LINC00544-201ENST00000400540 MCM10Q7L590 875 aa15.99■□□□□ 0.15
LINC00544-201ENST00000400540 PDZRN3Q9UPQ7 1066 aa15.99■□□□□ 0.15
LINC00544-201ENST00000400540 NPHP1O15259 732 aa15.98■□□□□ 0.15
LINC00544-201ENST00000400540 SRGNP10124 158 aa15.98■□□□□ 0.15
LINC00544-201ENST00000400540 ST5P78524 1137 aa15.98■□□□□ 0.15
LINC00544-201ENST00000400540 PRPF40BQ6NWY9 871 aaKnown RBP15.98■□□□□ 0.15
LINC00544-201ENST00000400540 TAOK3Q9H2K8 898 aa15.98■□□□□ 0.15
LINC00544-201ENST00000400540 LTBP3Q9NS15 1303 aa15.97■□□□□ 0.15
LINC00544-201ENST00000400540 DCTN1Q14203 1278 aa15.97■□□□□ 0.15
LINC00544-201ENST00000400540 STYK1Q6J9G0 422 aa15.97■□□□□ 0.15
LINC00544-201ENST00000400540 NPM2Q86SE8 214 aaKnown RBP15.97■□□□□ 0.15
LINC00544-201ENST00000400540 CFAP53Q96M91 514 aa15.97■□□□□ 0.15
LINC00544-201ENST00000400540 POTEIP0CG38 1075 aa15.96■□□□□ 0.15
LINC00544-201ENST00000400540 POTEJP0CG39 1038 aa15.96■□□□□ 0.15
LINC00544-201ENST00000400540 DPY19L2Q6NUT2 758 aa15.96■□□□□ 0.15
LINC00544-201ENST00000400540 CNKSR1Q969H4 720 aa15.96■□□□□ 0.15
LINC00544-201ENST00000400540 NBPF26B4DH59 902 aa15.95■□□□□ 0.14
LINC00544-201ENST00000400540 DDNO94850 711 aaPredicted RBP15.95■□□□□ 0.14
LINC00544-201ENST00000400540 U2AF1L5P0DN76 240 aaPredicted RBP15.95■□□□□ 0.14
LINC00544-201ENST00000400540 PPP2R1AP30153 589 aa15.95■□□□□ 0.14
LINC00544-201ENST00000400540 U2AF1Q01081 240 aaKnown RBP eCLIP15.95■□□□□ 0.14
LINC00544-201ENST00000400540 NBPF10Q6P3W6 841 aaKnown RBP15.95■□□□□ 0.14
LINC00544-201ENST00000400540 NBPF15Q8N660 670 aa15.95■□□□□ 0.14
LINC00544-201ENST00000400540 MASTLQ96GX5 879 aa15.95■□□□□ 0.14
LINC00544-201ENST00000400540 ADAMTSL1Q8N6G6 1762 aa15.95■□□□□ 0.14
LINC00544-201ENST00000400540 NBPF5PQ86XG9 351 aaPredicted RBP15.94■□□□□ 0.14
LINC00544-201ENST00000400540 FAM177BA6PVY3 158 aa15.93■□□□□ 0.14
LINC00544-201ENST00000400540 SNRPA1P09661 255 aaKnown RBP15.93■□□□□ 0.14
LINC00544-201ENST00000400540 HSPA1AP0DMV8 641 aaKnown RBP15.93■□□□□ 0.14
LINC00544-201ENST00000400540 HSPA1BP0DMV9 641 aaKnown RBP15.93■□□□□ 0.14
LINC00544-201ENST00000400540 OLFM4Q6UX06 510 aa15.93■□□□□ 0.14
LINC00544-201ENST00000400540 RTF1Q92541 710 aaKnown RBP15.93■□□□□ 0.14
LINC00544-201ENST00000400540 NUDCQ9Y266 331 aa15.93■□□□□ 0.14
LINC00544-201ENST00000400540 CLEC4GQ6UXB4 293 aa15.92■□□□□ 0.14
LINC00544-201ENST00000400540 C7orf43Q8WVR3 580 aa15.92■□□□□ 0.14
LINC00544-201ENST00000400540 CAPN15O75808 1086 aa15.91■□□□□ 0.14
LINC00544-201ENST00000400540 HLFQ16534 295 aa15.91■□□□□ 0.14
LINC00544-201ENST00000400540 CHADLQ6NUI6 762 aa15.91■□□□□ 0.14
LINC00544-201ENST00000400540 MIS18AQ9NYP9 233 aa15.91■□□□□ 0.14
LINC00544-201ENST00000400540 NIP7Q9Y221 180 aaKnown RBP eCLIP15.91■□□□□ 0.14
LINC00544-201ENST00000400540 ZNF652Q9Y2D9 606 aa15.91■□□□□ 0.14
LINC00544-201ENST00000400540 NPR1P16066 1061 aa15.9■□□□□ 0.14
LINC00544-201ENST00000400540 CCDC93Q567U6 631 aa15.9■□□□□ 0.14
LINC00544-201ENST00000400540 SOGA3Q5TF21 947 aa15.9■□□□□ 0.14
LINC00544-201ENST00000400540 ZNF541Q9H0D2 1346 aa15.9■□□□□ 0.14
LINC00544-201ENST00000400540 COL4A5P29400 1685 aa15.89■□□□□ 0.13
LINC00544-201ENST00000400540 ABCC12Q96J65 1359 aa15.89■□□□□ 0.13
LINC00544-201ENST00000400540 LTBP1Q14766 1721 aa15.89■□□□□ 0.13
LINC00544-201ENST00000400540 KLRG2A4D1S0 409 aaPredicted RBP15.89■□□□□ 0.13
LINC00544-201ENST00000400540 TNS4Q8IZW8 715 aa15.89■□□□□ 0.13
LINC00544-201ENST00000400540 ZNF277Q9NRM2 450 aaPredicted RBP15.89■□□□□ 0.13
LINC00544-201ENST00000400540 MKRN1Q9UHC7 482 aaKnown RBP15.89■□□□□ 0.13
LINC00544-201ENST00000400540 LAMB2P55268 1798 aa15.89■□□□□ 0.13
LINC00544-201ENST00000400540 ANKRD36CQ5JPF3 1778 aa15.89■□□□□ 0.13
LINC00544-201ENST00000400540 SNED1Q8TER0 1413 aa15.88■□□□□ 0.13
LINC00544-201ENST00000400540 FKBP4Q02790 459 aaKnown RBP eCLIP15.88■□□□□ 0.13
LINC00544-201ENST00000400540 TPTE2Q6XPS3 522 aa15.88■□□□□ 0.13
LINC00544-201ENST00000400540 HTATSF1O43719 755 aaKnown RBP15.87■□□□□ 0.13
LINC00544-201ENST00000400540 TAF7Q15545 349 aaPredicted RBP15.87■□□□□ 0.13
LINC00544-201ENST00000400540 NGEFQ8N5V2 710 aa15.87■□□□□ 0.13
LINC00544-201ENST00000400540 L3MBTL3Q96JM7 780 aaPredicted RBP15.87■□□□□ 0.13
LINC00544-201ENST00000400540 TAF1DQ9H5J8 278 aaPredicted RBP15.87■□□□□ 0.13
LINC00544-201ENST00000400540 CREBZFQ9NS37 354 aa15.87■□□□□ 0.13
LINC00544-201ENST00000400540 NUTM1Q86Y26 1132 aa15.86■□□□□ 0.13
LINC00544-201ENST00000400540 PASKQ96RG2 1323 aa15.86■□□□□ 0.13
LINC00544-201ENST00000400540 IQCA1LA6NCM1 817 aa15.85■□□□□ 0.13
LINC00544-201ENST00000400540 RGL2O15211 777 aa15.85■□□□□ 0.13
LINC00544-201ENST00000400540 SLC51AQ86UW1 340 aa15.85■□□□□ 0.13
LINC00544-201ENST00000400540 LDHDQ86WU2 507 aa15.85■□□□□ 0.13
LINC00544-201ENST00000400540 THUMPD2Q9BTF0 503 aaKnown RBP15.85■□□□□ 0.13
LINC00544-201ENST00000400540 EAPPQ56P03 285 aaPredicted RBP15.84■□□□□ 0.13
LINC00544-201ENST00000400540 TTLL7Q6ZT98 887 aa15.84■□□□□ 0.13
LINC00544-201ENST00000400540 RNF123Q5XPI4 1314 aa15.84■□□□□ 0.13
LINC00544-201ENST00000400540 CNTNAP1P78357 1384 aa15.84■□□□□ 0.13
LINC00544-201ENST00000400540 TAF1P21675 1872 aa15.83■□□□□ 0.12
LINC00544-201ENST00000400540 TRPM7Q96QT4 1865 aa15.83■□□□□ 0.12
LINC00544-201ENST00000400540 GTF2E1P29083 439 aaPredicted RBP15.83■□□□□ 0.12
LINC00544-201ENST00000400540 IARSP41252 1262 aaKnown RBP15.83■□□□□ 0.12
LINC00544-201ENST00000400540 RTKN2Q8IZC4 609 aa15.83■□□□□ 0.12
LINC00544-201ENST00000400540 SYNE4Q8N205 404 aa15.83■□□□□ 0.12
LINC00544-201ENST00000400540 MAP3K15Q6ZN16 1313 aa15.83■□□□□ 0.12
LINC00544-201ENST00000400540 UBN2Q6ZU65 1347 aa15.83■□□□□ 0.12
LINC00544-201ENST00000400540 MYL6BP14649 208 aa15.82■□□□□ 0.12
LINC00544-201ENST00000400540 ALDH1B1P30837 517 aa15.82■□□□□ 0.12
LINC00544-201ENST00000400540 EIF4A1P60842 406 aaKnown RBP15.82■□□□□ 0.12
LINC00544-201ENST00000400540 CRY2Q49AN0 593 aa15.82■□□□□ 0.12
LINC00544-201ENST00000400540 PLEKHF1Q96S99 279 aa15.82■□□□□ 0.12
LINC00544-201ENST00000400540 RRP7AQ9Y3A4 280 aaKnown RBP15.82■□□□□ 0.12
LINC00544-201ENST00000400540 FZD9O00144 591 aa15.81■□□□□ 0.12
LINC00544-201ENST00000400540 ITGBL1O95965 494 aaPredicted RBP15.81■□□□□ 0.12
LINC00544-201ENST00000400540 GPTP24298 496 aa15.81■□□□□ 0.12
LINC00544-201ENST00000400540 EPHX2P34913 555 aa15.81■□□□□ 0.12
LINC00544-201ENST00000400540 RIC1Q4ADV7 1423 aa15.81■□□□□ 0.12
LINC00544-201ENST00000400540 ZBTB3Q9H5J0 574 aa15.81■□□□□ 0.12
LINC00544-201ENST00000400540 HACL1Q9UJ83 578 aa15.81■□□□□ 0.12
LINC00544-201ENST00000400540 ERVV-1B6SEH8 477 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms