RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 ZNF496Q96IT1 587 aaPredicted RBP24.54■■□□□ 1.52
UFD1-202ENST00000399523 HEG1Q9ULI3 1381 aa24.54■■□□□ 1.52
UFD1-202ENST00000399523 ADAMTSL1Q8N6G6 1762 aa24.53■■□□□ 1.52
UFD1-202ENST00000399523 HSPA8P11142 646 aaKnown RBP24.53■■□□□ 1.52
UFD1-202ENST00000399523 ST5P78524 1137 aa24.53■■□□□ 1.52
UFD1-202ENST00000399523 CAMTA2O94983 1202 aa24.52■■□□□ 1.52
UFD1-202ENST00000399523 EAPPQ56P03 285 aaPredicted RBP24.52■■□□□ 1.52
UFD1-202ENST00000399523 HACL1Q9UJ83 578 aa24.52■■□□□ 1.52
UFD1-202ENST00000399523 DEFB115Q30KQ5 88 aa24.51■■□□□ 1.51
UFD1-202ENST00000399523 FAM161AQ3B820 660 aa24.51■■□□□ 1.51
UFD1-202ENST00000399523 CCDC93Q567U6 631 aa24.51■■□□□ 1.51
UFD1-202ENST00000399523 ZNF790Q6PG37 636 aa24.51■■□□□ 1.51
UFD1-202ENST00000399523 ZNF330Q9Y3S2 320 aaPredicted RBP24.51■■□□□ 1.51
UFD1-202ENST00000399523 NPHP1O15259 732 aa24.5■■□□□ 1.51
UFD1-202ENST00000399523 MAP2K1Q02750 393 aaPredicted RBP24.5■■□□□ 1.51
UFD1-202ENST00000399523 KNSTRNQ9Y448 316 aa24.5■■□□□ 1.51
UFD1-202ENST00000399523 ZNF541Q9H0D2 1346 aa24.5■■□□□ 1.51
UFD1-202ENST00000399523 EPHX2P34913 555 aa24.49■■□□□ 1.51
UFD1-202ENST00000399523 FKBP4Q02790 459 aaKnown RBP eCLIP24.49■■□□□ 1.51
UFD1-202ENST00000399523 CNTROBQ8N137 903 aa24.49■■□□□ 1.51
UFD1-202ENST00000399523 CLEC11AQ9Y240 323 aa24.49■■□□□ 1.51
UFD1-202ENST00000399523 A1BGP04217 495 aa24.48■■□□□ 1.51
UFD1-202ENST00000399523 PNMA8AQ86V59 439 aaPredicted RBP24.48■■□□□ 1.51
UFD1-202ENST00000399523 WDR33Q9C0J8 1336 aaKnown RBP24.47■■□□□ 1.51
UFD1-202ENST00000399523 NPM2Q86SE8 214 aaKnown RBP24.47■■□□□ 1.51
UFD1-202ENST00000399523 ZNF277Q9NRM2 450 aaPredicted RBP24.47■■□□□ 1.51
UFD1-202ENST00000399523 KLRG2A4D1S0 409 aaPredicted RBP24.46■■□□□ 1.51
UFD1-202ENST00000399523 NPR1P16066 1061 aa24.46■■□□□ 1.51
UFD1-202ENST00000399523 EIF4G2P78344 907 aaKnown RBP eCLIP24.46■■□□□ 1.51
UFD1-202ENST00000399523 AMER1Q5JTC6 1135 aaPredicted RBP24.46■■□□□ 1.51
UFD1-202ENST00000399523 IL17REQ8NFR9 667 aa24.46■■□□□ 1.51
UFD1-202ENST00000399523 BCORQ6W2J9 1755 aa24.46■■□□□ 1.51
UFD1-202ENST00000399523 HSPA5P11021 654 aaKnown RBP24.45■■□□□ 1.5
UFD1-202ENST00000399523 TEFQ10587 303 aa24.45■■□□□ 1.5
UFD1-202ENST00000399523 MAP1SQ66K74 1059 aaPredicted RBP24.45■■□□□ 1.5
UFD1-202ENST00000399523 SIPA1L3O60292 1781 aaPredicted RBP24.44■■□□□ 1.5
UFD1-202ENST00000399523 FZD9O00144 591 aa24.44■■□□□ 1.5
UFD1-202ENST00000399523 CLEC4GQ6UXB4 293 aa24.44■■□□□ 1.5
UFD1-202ENST00000399523 DZIP3Q86Y13 1208 aaKnown RBP24.44■■□□□ 1.5
UFD1-202ENST00000399523 RTKN2Q8IZC4 609 aa24.44■■□□□ 1.5
UFD1-202ENST00000399523 FMNL2Q96PY5 1086 aa24.44■■□□□ 1.5
UFD1-202ENST00000399523 RNF123Q5XPI4 1314 aa24.43■■□□□ 1.5
UFD1-202ENST00000399523 RGS19P49795 217 aa24.43■■□□□ 1.5
UFD1-202ENST00000399523 NBPF5PQ86XG9 351 aaPredicted RBP24.43■■□□□ 1.5
UFD1-202ENST00000399523 DIAPH1O60610 1272 aaKnown RBP24.42■■□□□ 1.5
UFD1-202ENST00000399523 GPC2Q8N158 579 aa24.42■■□□□ 1.5
UFD1-202ENST00000399523 ABT1Q9ULW3 272 aaKnown RBP24.42■■□□□ 1.5
UFD1-202ENST00000399523 GNAT3A8MTJ3 354 aa24.41■■□□□ 1.5
UFD1-202ENST00000399523 OLFM4Q6UX06 510 aa24.41■■□□□ 1.5
UFD1-202ENST00000399523 IARSP41252 1262 aaKnown RBP24.4■■□□□ 1.5
UFD1-202ENST00000399523 MLLT1Q03111 559 aaPredicted RBP24.4■■□□□ 1.5
UFD1-202ENST00000399523 DDX21Q9NR30 783 aaKnown RBP eCLIP24.4■■□□□ 1.5
UFD1-202ENST00000399523 THSD7BQ9C0I4 1608 aa24.39■■□□□ 1.5
UFD1-202ENST00000399523 PCDH10Q9P2E7 1040 aa24.39■■□□□ 1.49
UFD1-202ENST00000399523 TPTE2Q6XPS3 522 aa24.38■■□□□ 1.49
UFD1-202ENST00000399523 SYNE4Q8N205 404 aa24.38■■□□□ 1.49
UFD1-202ENST00000399523 GAS2L2Q8NHY3 880 aa24.38■■□□□ 1.49
UFD1-202ENST00000399523 CCDC85CA6NKD9 419 aa24.37■■□□□ 1.49
UFD1-202ENST00000399523 RGL2O15211 777 aa24.37■■□□□ 1.49
UFD1-202ENST00000399523 ZNF652Q9Y2D9 606 aa24.37■■□□□ 1.49
UFD1-202ENST00000399523 USP16Q9Y5T5 823 aa24.37■■□□□ 1.49
UFD1-202ENST00000399523 CEMIPQ8WUJ3 1361 aa24.37■■□□□ 1.49
UFD1-202ENST00000399523 KCNQ3O43525 872 aa24.36■■□□□ 1.49
UFD1-202ENST00000399523 ALDH1B1P30837 517 aa24.36■■□□□ 1.49
UFD1-202ENST00000399523 CAPNS2Q96L46 248 aa24.36■■□□□ 1.49
UFD1-202ENST00000399523 SNED1Q8TER0 1413 aa24.35■■□□□ 1.49
UFD1-202ENST00000399523 ECE1P42892 770 aa24.35■■□□□ 1.49
UFD1-202ENST00000399523 PSMD1Q99460 953 aa24.35■■□□□ 1.49
UFD1-202ENST00000399523 BEGAINQ9BUH8 593 aa24.35■■□□□ 1.49
UFD1-202ENST00000399523 PIP4K2AP48426 406 aaPredicted RBP24.34■■□□□ 1.49
UFD1-202ENST00000399523 JDP2Q8WYK2 163 aa24.34■■□□□ 1.49
UFD1-202ENST00000399523 GPR101Q96P66 508 aaPredicted RBP24.34■■□□□ 1.49
UFD1-202ENST00000399523 BTBD11A6QL63 1104 aa24.33■■□□□ 1.49
UFD1-202ENST00000399523 NIP7Q9Y221 180 aaKnown RBP eCLIP24.32■■□□□ 1.48
UFD1-202ENST00000399523 LTBP1Q14766 1721 aa24.32■■□□□ 1.48
UFD1-202ENST00000399523 TRPM7Q96QT4 1865 aa24.32■■□□□ 1.48
UFD1-202ENST00000399523 FMR1Q06787 632 aaKnown RBP eCLIP24.31■■□□□ 1.48
UFD1-202ENST00000399523 CST9Q5W186 159 aa24.31■■□□□ 1.48
UFD1-202ENST00000399523 CYP4F22Q6NT55 531 aa24.31■■□□□ 1.48
UFD1-202ENST00000399523 LMOD1P29536 600 aaPredicted RBP24.3■■□□□ 1.48
UFD1-202ENST00000399523 SCNN1DP51172 638 aa24.3■■□□□ 1.48
UFD1-202ENST00000399523 EIF6P56537 245 aaKnown RBP24.3■■□□□ 1.48
UFD1-202ENST00000399523 COL3A1P02461 1466 aaPredicted RBP24.3■■□□□ 1.48
UFD1-202ENST00000399523 COL4A5P29400 1685 aa24.3■■□□□ 1.48
UFD1-202ENST00000399523 CLSPNQ9HAW4 1339 aa24.3■■□□□ 1.48
UFD1-202ENST00000399523 PDE4DIPQ5VU43 2346 aa24.29■■□□□ 1.48
UFD1-202ENST00000399523 PRAMEF22A3QJZ6 481 aa24.29■■□□□ 1.48
UFD1-202ENST00000399523 MAP2K2P36507 400 aa24.29■■□□□ 1.48
UFD1-202ENST00000399523 CC2D2BQ6DHV5 1058 aa24.29■■□□□ 1.48
UFD1-202ENST00000399523 PAXIP1Q6ZW49 1069 aaPredicted RBP24.29■■□□□ 1.48
UFD1-202ENST00000399523 GJA3Q9Y6H8 435 aa24.29■■□□□ 1.48
UFD1-202ENST00000399523 TLL2Q9Y6L7 1015 aa24.29■■□□□ 1.48
UFD1-202ENST00000399523 SNRPA1P09661 255 aaKnown RBP24.28■■□□□ 1.48
UFD1-202ENST00000399523 EPS15P42566 896 aa24.28■■□□□ 1.48
UFD1-202ENST00000399523 CRY2Q49AN0 593 aa24.28■■□□□ 1.48
UFD1-202ENST00000399523 NBPF26B4DH59 902 aa24.27■■□□□ 1.48
UFD1-202ENST00000399523 U2SURPO15042 1029 aaKnown RBP24.27■■□□□ 1.48
UFD1-202ENST00000399523 PER1O15534 1290 aaPredicted RBP24.27■■□□□ 1.48
UFD1-202ENST00000399523 NBPF10Q6P3W6 841 aaKnown RBP24.27■■□□□ 1.48
UFD1-202ENST00000399523 USP50Q70EL3 339 aaPredicted RBP24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms