RNA–Protein interactions for RNA: ENST00000399353.5

ITSN1-210, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-210ENST00000399353 DDX19AQ9NUU7 478 aaKnown RBP17.42■□□□□ 0.38
ITSN1-210ENST00000399353 TTC31Q49AM3 519 aaPredicted RBP17.42■□□□□ 0.38
ITSN1-210ENST00000399353 NME9Q86XW9 330 aa17.42■□□□□ 0.38
ITSN1-210ENST00000399353 RGS22Q8NE09 1264 aa17.42■□□□□ 0.38
ITSN1-210ENST00000399353 PLEKHA4Q9H4M7 779 aa17.42■□□□□ 0.38
ITSN1-210ENST00000399353 SMC1AQ14683 1233 aaKnown RBP17.41■□□□□ 0.38
ITSN1-210ENST00000399353 HSP90B2PQ58FF3 399 aa17.41■□□□□ 0.38
ITSN1-210ENST00000399353 LCMT1Q9UIC8 334 aa17.41■□□□□ 0.38
ITSN1-210ENST00000399353 SNX14Q9Y5W7 946 aa17.41■□□□□ 0.38
ITSN1-210ENST00000399353 CASQ1P31415 396 aa17.41■□□□□ 0.38
ITSN1-210ENST00000399353 EVCP57679 992 aa17.41■□□□□ 0.38
ITSN1-210ENST00000399353 SCAND2PQ9GZW5 306 aaPredicted RBP17.41■□□□□ 0.38
ITSN1-210ENST00000399353 TRPM1Q7Z4N2 1603 aa17.41■□□□□ 0.38
ITSN1-210ENST00000399353 SYCP1Q15431 976 aa17.41■□□□□ 0.38
ITSN1-210ENST00000399353 NUTM2GQ5VZR2 741 aa17.41■□□□□ 0.38
ITSN1-210ENST00000399353 SRRTQ9BXP5 876 aaKnown RBP17.41■□□□□ 0.38
ITSN1-210ENST00000399353 SYNMO15061 1565 aa17.4■□□□□ 0.38
ITSN1-210ENST00000399353 DHX16O60231 1041 aaKnown RBP17.4■□□□□ 0.38
ITSN1-210ENST00000399353 PDCP20941 246 aa17.4■□□□□ 0.38
ITSN1-210ENST00000399353 CNTROBQ8N137 903 aa17.4■□□□□ 0.38
ITSN1-210ENST00000399353 ARFGAP3Q9NP61 516 aa17.4■□□□□ 0.38
ITSN1-210ENST00000399353 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.4■□□□□ 0.38
ITSN1-210ENST00000399353 CEP57L1Q8IYX8 460 aa17.4■□□□□ 0.38
ITSN1-210ENST00000399353 RABEP2Q9H5N1 569 aa17.4■□□□□ 0.38
ITSN1-210ENST00000399353 TRAPPC8Q9Y2L5 1435 aa17.4■□□□□ 0.38
ITSN1-210ENST00000399353 CEP170Q5SW79 1584 aa17.39■□□□□ 0.37
ITSN1-210ENST00000399353 NGDNQ8NEJ9 315 aaKnown RBP17.39■□□□□ 0.37
ITSN1-210ENST00000399353 C14orf93Q9H972 538 aaKnown RBP17.39■□□□□ 0.37
ITSN1-210ENST00000399353 ZNF446Q9NWS9 450 aa17.39■□□□□ 0.37
ITSN1-210ENST00000399353 RRP15Q9Y3B9 282 aaKnown RBP17.39■□□□□ 0.37
ITSN1-210ENST00000399353 ABCC4O15439 1325 aa17.39■□□□□ 0.37
ITSN1-210ENST00000399353 RAPGEF3O95398 923 aa17.39■□□□□ 0.37
ITSN1-210ENST00000399353 G2E3Q7L622 706 aa17.39■□□□□ 0.37
ITSN1-210ENST00000399353 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.39■□□□□ 0.37
ITSN1-210ENST00000399353 CD109Q6YHK3 1445 aa17.39■□□□□ 0.37
ITSN1-210ENST00000399353 KIF2AO00139 706 aaPredicted RBP17.39■□□□□ 0.37
ITSN1-210ENST00000399353 TXNDC2Q86VQ3 553 aa17.39■□□□□ 0.37
ITSN1-210ENST00000399353 CREBRFQ8IUR6 639 aa17.39■□□□□ 0.37
ITSN1-210ENST00000399353 MSH6P52701 1360 aa17.38■□□□□ 0.37
ITSN1-210ENST00000399353 NEMFO60524 1076 aa17.38■□□□□ 0.37
ITSN1-210ENST00000399353 GNG11P61952 73 aa17.38■□□□□ 0.37
ITSN1-210ENST00000399353 ZRANB1Q9UGI0 708 aa17.38■□□□□ 0.37
ITSN1-210ENST00000399353 UBTFL1P0CB47 393 aaPredicted RBP17.38■□□□□ 0.37
ITSN1-210ENST00000399353 IL25Q9H293 177 aa17.38■□□□□ 0.37
ITSN1-210ENST00000399353 IFNKQ9P0W0 207 aa17.38■□□□□ 0.37
ITSN1-210ENST00000399353 PNMA6EA0A0J9YXQ4 647 aa17.38■□□□□ 0.37
ITSN1-210ENST00000399353 SERPINC1P01008 464 aa17.38■□□□□ 0.37
ITSN1-210ENST00000399353 SHANK2Q9UPX8 1470 aa17.37■□□□□ 0.37
ITSN1-210ENST00000399353 LARP1Q6PKG0 1096 aaKnown RBP17.37■□□□□ 0.37
ITSN1-210ENST00000399353 RNF216Q9NWF9 866 aaPredicted RBP17.37■□□□□ 0.37
ITSN1-210ENST00000399353 EIF4G3O43432 1585 aaKnown RBP17.37■□□□□ 0.37
ITSN1-210ENST00000399353 LMOD1P29536 600 aaPredicted RBP17.37■□□□□ 0.37
ITSN1-210ENST00000399353 MNAT1P51948 309 aa17.37■□□□□ 0.37
ITSN1-210ENST00000399353 C11orf57Q6ZUT1 292 aaPredicted RBP17.37■□□□□ 0.37
ITSN1-210ENST00000399353 RUFY2Q8WXA3 655 aa17.37■□□□□ 0.37
ITSN1-210ENST00000399353 CCAR1Q8IX12 1150 aaKnown RBP17.37■□□□□ 0.37
ITSN1-210ENST00000399353 MICALL1Q8N3F8 863 aa17.37■□□□□ 0.37
ITSN1-210ENST00000399353 NAT10Q9H0A0 1025 aaKnown RBP17.37■□□□□ 0.37
ITSN1-210ENST00000399353 EP400NLQ6ZTU2 488 aa17.36■□□□□ 0.37
ITSN1-210ENST00000399353 STK11IPQ8N1F8 1099 aa17.36■□□□□ 0.37
ITSN1-210ENST00000399353 PPP6R1Q9UPN7 881 aa17.36■□□□□ 0.37
ITSN1-210ENST00000399353 JRKLQ9Y4A0 524 aa17.36■□□□□ 0.37
ITSN1-210ENST00000399353 PTPRTO14522 1441 aa17.36■□□□□ 0.37
ITSN1-210ENST00000399353 PLA2G4AP47712 749 aa17.36■□□□□ 0.37
ITSN1-210ENST00000399353 PATL2C9JE40 543 aaKnown RBP17.36■□□□□ 0.37
ITSN1-210ENST00000399353 MYCNP04198 464 aaPredicted RBP17.36■□□□□ 0.37
ITSN1-210ENST00000399353 FAM193AP78312 1265 aa17.36■□□□□ 0.37
ITSN1-210ENST00000399353 ADCK5Q3MIX3 580 aa17.36■□□□□ 0.37
ITSN1-210ENST00000399353 CFAP100Q494V2 611 aa17.36■□□□□ 0.37
ITSN1-210ENST00000399353 UTP14AQ9BVJ6 771 aaKnown RBP17.36■□□□□ 0.37
ITSN1-210ENST00000399353 A0A1B0GUL7 405 aa17.35■□□□□ 0.37
ITSN1-210ENST00000399353 GOLGA8FQ08AF8 430 aa17.35■□□□□ 0.37
ITSN1-210ENST00000399353 GOLGA8DPQ0D2H9 430 aa17.35■□□□□ 0.37
ITSN1-210ENST00000399353 ICE2Q659A1 982 aa17.35■□□□□ 0.37
ITSN1-210ENST00000399353 FUCA2Q9BTY2 467 aa17.35■□□□□ 0.37
ITSN1-210ENST00000399353 LRRC2Q9BYS8 371 aa17.35■□□□□ 0.37
ITSN1-210ENST00000399353 ME3Q16798 604 aa17.35■□□□□ 0.37
ITSN1-210ENST00000399353 BLOC1S2Q6QNY1 142 aa17.35■□□□□ 0.37
ITSN1-210ENST00000399353 HSPA4P34932 840 aa17.35■□□□□ 0.37
ITSN1-210ENST00000399353 LEO1Q8WVC0 666 aaPredicted RBP17.35■□□□□ 0.37
ITSN1-210ENST00000399353 NPHP3Q7Z494 1330 aa17.35■□□□□ 0.37
ITSN1-210ENST00000399353 SRGAP3O43295 1099 aa17.34■□□□□ 0.37
ITSN1-210ENST00000399353 STX1AQ16623 288 aa17.34■□□□□ 0.37
ITSN1-210ENST00000399353 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.34■□□□□ 0.37
ITSN1-210ENST00000399353 EFCC1Q9HA90 598 aa17.34■□□□□ 0.37
ITSN1-210ENST00000399353 ERVK-7P63135 1459 aa17.34■□□□□ 0.37
ITSN1-210ENST00000399353 ZSCAN31Q96LW9 406 aaPredicted RBP17.34■□□□□ 0.37
ITSN1-210ENST00000399353 ANO10Q9NW15 660 aa17.34■□□□□ 0.37
ITSN1-210ENST00000399353 PUF60Q9UHX1 559 aaKnown RBP17.34■□□□□ 0.37
ITSN1-210ENST00000399353 IDI1Q13907 227 aa17.34■□□□□ 0.37
ITSN1-210ENST00000399353 FSIP1Q8NA03 581 aa17.34■□□□□ 0.37
ITSN1-210ENST00000399353 CLSTN2Q9H4D0 955 aa17.34■□□□□ 0.37
ITSN1-210ENST00000399353 FHOD1Q9Y613 1164 aa17.34■□□□□ 0.37
ITSN1-210ENST00000399353 EIF2AK4Q9P2K8 1649 aaKnown RBP17.33■□□□□ 0.37
ITSN1-210ENST00000399353 ADGBQ8N7X0 1667 aa17.33■□□□□ 0.36
ITSN1-210ENST00000399353 ZNF518AQ6AHZ1 1483 aa17.33■□□□□ 0.36
ITSN1-210ENST00000399353 H0YHG0 523 aa17.33■□□□□ 0.36
ITSN1-210ENST00000399353 GNAI3P08754 354 aa17.33■□□□□ 0.36
ITSN1-210ENST00000399353 IFIT2P09913 472 aaKnown RBP17.33■□□□□ 0.36
ITSN1-210ENST00000399353 TMEM87AQ8NBN3 555 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms