RNA–Protein interactions for RNA: ENST00000399218.8

GAREM1-202, Transcript of GRB2 associated regulator of MAPK1 subtype 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene GAREM1, Length 7,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAREM1-202ENST00000399218 MAP3K12Q12852 859 aa12.95□□□□□ -0.34
GAREM1-202ENST00000399218 TPD52L1Q16890 204 aaPredicted RBP12.95□□□□□ -0.34
GAREM1-202ENST00000399218 PUS7Q96PZ0 661 aaKnown RBP12.95□□□□□ -0.34
GAREM1-202ENST00000399218 GRM8O00222 908 aa12.95□□□□□ -0.34
GAREM1-202ENST00000399218 CCDC34Q96HJ3 373 aa12.95□□□□□ -0.34
GAREM1-202ENST00000399218 G2E3Q7L622 706 aa12.95□□□□□ -0.34
GAREM1-202ENST00000399218 ZNF526Q8TF50 670 aaPredicted RBP12.95□□□□□ -0.34
GAREM1-202ENST00000399218 ZNF496Q96IT1 587 aaPredicted RBP12.95□□□□□ -0.34
GAREM1-202ENST00000399218 RANBP6O60518 1105 aaKnown RBP12.94□□□□□ -0.34
GAREM1-202ENST00000399218 CEBPZQ03701 1054 aaKnown RBP12.94□□□□□ -0.34
GAREM1-202ENST00000399218 ZFYVE9O95405 1425 aa12.94□□□□□ -0.34
GAREM1-202ENST00000399218 UBAC1Q9BSL1 405 aa12.94□□□□□ -0.34
GAREM1-202ENST00000399218 CCDC82Q8N4S0 544 aa12.94□□□□□ -0.34
GAREM1-202ENST00000399218 PTPRMP28827 1452 aa12.94□□□□□ -0.34
GAREM1-202ENST00000399218 TET3O43151 1660 aa12.94□□□□□ -0.34
GAREM1-202ENST00000399218 DIP2BQ9P265 1576 aa12.94□□□□□ -0.34
GAREM1-202ENST00000399218 PHKG2P15735 406 aa12.94□□□□□ -0.34
GAREM1-202ENST00000399218 MX1P20591 662 aa12.94□□□□□ -0.34
GAREM1-202ENST00000399218 KDM5AP29375 1690 aaKnown RBP12.93□□□□□ -0.34
GAREM1-202ENST00000399218 H0YIN7 160 aa12.93□□□□□ -0.34
GAREM1-202ENST00000399218 PTPRTO14522 1441 aa12.93□□□□□ -0.34
GAREM1-202ENST00000399218 OGFOD1Q8N543 542 aa12.93□□□□□ -0.34
GAREM1-202ENST00000399218 MYO1BO43795 1136 aa12.93□□□□□ -0.34
GAREM1-202ENST00000399218 TMEM132AQ24JP5 1023 aa12.93□□□□□ -0.34
GAREM1-202ENST00000399218 NAPBQ9H115 298 aa12.93□□□□□ -0.34
GAREM1-202ENST00000399218 PER1O15534 1290 aaPredicted RBP12.93□□□□□ -0.34
GAREM1-202ENST00000399218 FAM196AQ6ZSG2 479 aa12.93□□□□□ -0.34
GAREM1-202ENST00000399218 RBM17Q96I25 401 aaKnown RBP12.93□□□□□ -0.34
GAREM1-202ENST00000399218 BRMS1Q9HCU9 246 aa12.92□□□□□ -0.34
GAREM1-202ENST00000399218 CLTCL1P53675 1640 aa12.92□□□□□ -0.34
GAREM1-202ENST00000399218 CSPP1Q1MSJ5 1256 aa12.92□□□□□ -0.34
GAREM1-202ENST00000399218 ARHGEF25Q86VW2 580 aa12.92□□□□□ -0.34
GAREM1-202ENST00000399218 RAB11FIP3O75154 756 aa12.92□□□□□ -0.34
GAREM1-202ENST00000399218 ZNF594Q96JF6 807 aaPredicted RBP12.91□□□□□ -0.34
GAREM1-202ENST00000399218 FEZ1Q99689 392 aa12.91□□□□□ -0.34
GAREM1-202ENST00000399218 XBP1P17861 261 aa12.91□□□□□ -0.34
GAREM1-202ENST00000399218 CAMSAP1Q5T5Y3 1602 aa12.91□□□□□ -0.34
GAREM1-202ENST00000399218 ARAP3Q8WWN8 1544 aa12.91□□□□□ -0.34
GAREM1-202ENST00000399218 HAND2P61296 217 aa12.91□□□□□ -0.34
GAREM1-202ENST00000399218 AAMPQ13685 434 aa12.91□□□□□ -0.34
GAREM1-202ENST00000399218 ARHGAP27Q6ZUM4 889 aa12.91□□□□□ -0.34
GAREM1-202ENST00000399218 ZNF444Q8N0Y2 327 aaPredicted RBP12.91□□□□□ -0.34
GAREM1-202ENST00000399218 MRPL50Q8N5N7 158 aaKnown RBP12.91□□□□□ -0.34
GAREM1-202ENST00000399218 BICD2Q8TD16 824 aa12.91□□□□□ -0.34
GAREM1-202ENST00000399218 JAKMIP1Q96N16 626 aaKnown RBP12.91□□□□□ -0.34
GAREM1-202ENST00000399218 LARP6Q9BRS8 491 aaKnown RBP12.91□□□□□ -0.34
GAREM1-202ENST00000399218 LRRIQ1Q96JM4 1722 aa12.91□□□□□ -0.34
GAREM1-202ENST00000399218 PRKG1Q13976 671 aa12.91□□□□□ -0.34
GAREM1-202ENST00000399218 CCDC96Q2M329 555 aa12.91□□□□□ -0.34
GAREM1-202ENST00000399218 BICC1Q9H694 974 aaKnown RBP12.9□□□□□ -0.34
GAREM1-202ENST00000399218 POLR3AO14802 1390 aaPredicted RBP12.9□□□□□ -0.34
GAREM1-202ENST00000399218 KLHDC4Q8TBB5 520 aa12.9□□□□□ -0.34
GAREM1-202ENST00000399218 CARD10Q9BWT7 1032 aa12.9□□□□□ -0.34
GAREM1-202ENST00000399218 SPATA31A3Q5VYP0 1347 aa12.9□□□□□ -0.34
GAREM1-202ENST00000399218 UFL1O94874 794 aa12.9□□□□□ -0.34
GAREM1-202ENST00000399218 DIP2CQ9Y2E4 1556 aa12.9□□□□□ -0.34
GAREM1-202ENST00000399218 PARD3Q8TEW0 1356 aa12.9□□□□□ -0.34
GAREM1-202ENST00000399218 TAF5LO75529 589 aa12.9□□□□□ -0.34
GAREM1-202ENST00000399218 ATP2B3Q16720 1220 aa12.9□□□□□ -0.34
GAREM1-202ENST00000399218 IMMTQ16891 758 aaKnown RBP12.9□□□□□ -0.35
GAREM1-202ENST00000399218 USP16Q9Y5T5 823 aa12.9□□□□□ -0.35
GAREM1-202ENST00000399218 ABCA6Q8N139 1617 aa12.89□□□□□ -0.35
GAREM1-202ENST00000399218 LOC102724428A0A0B4J2F2 783 aa12.89□□□□□ -0.35
GAREM1-202ENST00000399218 PPFIA3O75145 1194 aa12.89□□□□□ -0.35
GAREM1-202ENST00000399218 SIK1P57059 783 aa12.89□□□□□ -0.35
GAREM1-202ENST00000399218 EAPPQ56P03 285 aaPredicted RBP12.89□□□□□ -0.35
GAREM1-202ENST00000399218 CNKSR2Q8WXI2 1034 aa12.89□□□□□ -0.35
GAREM1-202ENST00000399218 IPO9Q96P70 1041 aaKnown RBP12.89□□□□□ -0.35
GAREM1-202ENST00000399218 PSDA5PKW4 1024 aaPredicted RBP12.89□□□□□ -0.35
GAREM1-202ENST00000399218 LMOD1P29536 600 aaPredicted RBP12.89□□□□□ -0.35
GAREM1-202ENST00000399218 HDAC9Q9UKV0 1011 aa12.89□□□□□ -0.35
GAREM1-202ENST00000399218 SPHKAPQ2M3C7 1700 aa12.89□□□□□ -0.35
GAREM1-202ENST00000399218 SPATA31E1Q6ZUB1 1445 aa12.89□□□□□ -0.35
GAREM1-202ENST00000399218 GLRX3O76003 335 aaKnown RBP12.89□□□□□ -0.35
GAREM1-202ENST00000399218 TRMT1LQ7Z2T5 733 aaKnown RBP12.89□□□□□ -0.35
GAREM1-202ENST00000399218 RAB11FIP4Q86YS3 637 aa12.89□□□□□ -0.35
GAREM1-202ENST00000399218 VAT1LQ9HCJ6 419 aa12.89□□□□□ -0.35
GAREM1-202ENST00000399218 VAMP4O75379 141 aa12.88□□□□□ -0.35
GAREM1-202ENST00000399218 CYP46A1Q9Y6A2 500 aa12.88□□□□□ -0.35
GAREM1-202ENST00000399218 ZNF804AQ7Z570 1209 aa12.88□□□□□ -0.35
GAREM1-202ENST00000399218 SLF2Q8IX21 1173 aa12.88□□□□□ -0.35
GAREM1-202ENST00000399218 CCDC144CPQ8IYA2 1237 aa12.88□□□□□ -0.35
GAREM1-202ENST00000399218 IL17REQ8NFR9 667 aa12.88□□□□□ -0.35
GAREM1-202ENST00000399218 USPL1Q5W0Q7 1092 aa12.88□□□□□ -0.35
GAREM1-202ENST00000399218 PLXNC1O60486 1568 aa12.88□□□□□ -0.35
GAREM1-202ENST00000399218 USP6P35125 1406 aa12.88□□□□□ -0.35
GAREM1-202ENST00000399218 CYP7A1P22680 504 aa12.88□□□□□ -0.35
GAREM1-202ENST00000399218 EN1Q05925 392 aaPredicted RBP12.88□□□□□ -0.35
GAREM1-202ENST00000399218 PRPF40BQ6NWY9 871 aaKnown RBP12.88□□□□□ -0.35
GAREM1-202ENST00000399218 SYAP1Q96A49 352 aaPredicted RBP12.88□□□□□ -0.35
GAREM1-202ENST00000399218 NRDCO43847 1150 aa12.88□□□□□ -0.35
GAREM1-202ENST00000399218 DDX21Q9NR30 783 aaKnown RBP eCLIP12.88□□□□□ -0.35
GAREM1-202ENST00000399218 TSHZ2Q9NRE2 1034 aa12.88□□□□□ -0.35
GAREM1-202ENST00000399218 AXIN2Q9Y2T1 843 aa12.88□□□□□ -0.35
GAREM1-202ENST00000399218 IL16Q14005 1332 aa12.87□□□□□ -0.35
GAREM1-202ENST00000399218 TPM4P67936 248 aa12.87□□□□□ -0.35
GAREM1-202ENST00000399218 ITGA6P23229 1130 aa12.87□□□□□ -0.35
GAREM1-202ENST00000399218 SOGA3Q5TF21 947 aa12.87□□□□□ -0.35
GAREM1-202ENST00000399218 LARGE2Q8N3Y3 721 aa12.87□□□□□ -0.35
GAREM1-202ENST00000399218 WDR17Q8IZU2 1322 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms