RNA–Protein interactions for RNA: ENST00000398788.4

CDH23-203, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-203ENST00000398788 A2MP01023 1474 aa10.88□□□□□ -0.67
CDH23-203ENST00000398788 NOS1P29475 1434 aa10.88□□□□□ -0.67
CDH23-203ENST00000398788 TRAPPC8Q9Y2L5 1435 aa10.87□□□□□ -0.67
CDH23-203ENST00000398788 KINO60870 393 aaKnown RBP10.87□□□□□ -0.67
CDH23-203ENST00000398788 NAP1L1P55209 391 aaKnown RBP10.87□□□□□ -0.67
CDH23-203ENST00000398788 NCAPGQ9BPX3 1015 aa10.87□□□□□ -0.67
CDH23-203ENST00000398788 ZBTB12Q9Y330 459 aaPredicted RBP10.87□□□□□ -0.67
CDH23-203ENST00000398788 CYP46A1Q9Y6A2 500 aa10.87□□□□□ -0.67
CDH23-203ENST00000398788 MYO5CQ9NQX4 1742 aa10.87□□□□□ -0.67
CDH23-203ENST00000398788 CDC42BPBQ9Y5S2 1711 aa10.87□□□□□ -0.67
CDH23-203ENST00000398788 FAM83GA6ND36 823 aa10.87□□□□□ -0.67
CDH23-203ENST00000398788 GEMIN8Q9NWZ8 242 aaKnown RBP10.87□□□□□ -0.67
CDH23-203ENST00000398788 PREX2Q70Z35 1606 aa10.86□□□□□ -0.67
CDH23-203ENST00000398788 ANKRD65E5RJM6 399 aa10.86□□□□□ -0.67
CDH23-203ENST00000398788 ANXA1P04083 346 aa10.86□□□□□ -0.67
CDH23-203ENST00000398788 STK38Q15208 465 aa10.86□□□□□ -0.67
CDH23-203ENST00000398788 BMP2KLQ5H9B9 411 aa10.86□□□□□ -0.67
CDH23-203ENST00000398788 LRCH2Q5VUJ6 765 aa10.86□□□□□ -0.67
CDH23-203ENST00000398788 LARP1BQ659C4 914 aaKnown RBP10.86□□□□□ -0.67
CDH23-203ENST00000398788 KIF6Q6ZMV9 814 aa10.86□□□□□ -0.67
CDH23-203ENST00000398788 KIAA1524Q8TCG1 905 aa10.86□□□□□ -0.67
CDH23-203ENST00000398788 DDX11Q96FC9 970 aa10.86□□□□□ -0.67
CDH23-203ENST00000398788 ZNF518AQ6AHZ1 1483 aa10.86□□□□□ -0.67
CDH23-203ENST00000398788 GADD45BO75293 160 aaPredicted RBP10.86□□□□□ -0.67
CDH23-203ENST00000398788 SMC2O95347 1197 aa10.86□□□□□ -0.67
CDH23-203ENST00000398788 ATP6V1AP38606 617 aa10.86□□□□□ -0.67
CDH23-203ENST00000398788 CCDC158Q5M9N0 1113 aa10.86□□□□□ -0.67
CDH23-203ENST00000398788 MPRIPQ6WCQ1 1025 aa10.86□□□□□ -0.67
CDH23-203ENST00000398788 KRT28Q7Z3Y7 464 aa10.86□□□□□ -0.67
CDH23-203ENST00000398788 CCDC47Q96A33 483 aaKnown RBP10.86□□□□□ -0.67
CDH23-203ENST00000398788 JAKMIP1Q96N16 626 aaKnown RBP10.86□□□□□ -0.67
CDH23-203ENST00000398788 NUP62CLQ9H1M0 184 aa10.86□□□□□ -0.67
CDH23-203ENST00000398788 CEP83Q9Y592 693 aa10.86□□□□□ -0.67
CDH23-203ENST00000398788 ABCA9Q8IUA7 1624 aa10.86□□□□□ -0.67
CDH23-203ENST00000398788 SARNPP82979 210 aaKnown RBP10.86□□□□□ -0.67
CDH23-203ENST00000398788 CCDC57Q2TAC2 916 aa10.86□□□□□ -0.67
CDH23-203ENST00000398788 TTC39AQ5SRH9 613 aa10.86□□□□□ -0.67
CDH23-203ENST00000398788 ERO1AQ96HE7 468 aa10.86□□□□□ -0.67
CDH23-203ENST00000398788 ACBD3Q9H3P7 528 aa10.86□□□□□ -0.67
CDH23-203ENST00000398788 RRP15Q9Y3B9 282 aaKnown RBP10.86□□□□□ -0.67
CDH23-203ENST00000398788 SKILP12757 684 aa10.85□□□□□ -0.67
CDH23-203ENST00000398788 HSPA2P54652 639 aa10.85□□□□□ -0.67
CDH23-203ENST00000398788 MCM6Q14566 821 aa10.85□□□□□ -0.67
CDH23-203ENST00000398788 MAP3K11Q16584 847 aa10.85□□□□□ -0.67
CDH23-203ENST00000398788 NGLY1Q96IV0 654 aa10.85□□□□□ -0.67
CDH23-203ENST00000398788 MPHOSPH8Q99549 860 aa10.85□□□□□ -0.67
CDH23-203ENST00000398788 CEP126Q9P2H0 1117 aa10.85□□□□□ -0.67
CDH23-203ENST00000398788 TCOF1Q13428 1488 aaKnown RBP10.85□□□□□ -0.67
CDH23-203ENST00000398788 SNW1Q13573 536 aaKnown RBP10.85□□□□□ -0.67
CDH23-203ENST00000398788 TAF7Q15545 349 aaPredicted RBP10.85□□□□□ -0.67
CDH23-203ENST00000398788 ERCC6LQ2NKX8 1250 aa10.85□□□□□ -0.67
CDH23-203ENST00000398788 RPAINQ86UA6 219 aa10.85□□□□□ -0.67
CDH23-203ENST00000398788 NUP133Q8WUM0 1156 aa10.85□□□□□ -0.67
CDH23-203ENST00000398788 HOOK1Q9UJC3 728 aaKnown RBP10.85□□□□□ -0.67
CDH23-203ENST00000398788 CNPY2Q9Y2B0 182 aa10.85□□□□□ -0.67
CDH23-203ENST00000398788 PPFIA3O75145 1194 aa10.85□□□□□ -0.67
CDH23-203ENST00000398788 IVLP07476 585 aa10.85□□□□□ -0.67
CDH23-203ENST00000398788 CCDC172P0C7W6 258 aa10.85□□□□□ -0.67
CDH23-203ENST00000398788 MX1P20591 662 aa10.85□□□□□ -0.67
CDH23-203ENST00000398788 CASTP20810 708 aaKnown RBP10.85□□□□□ -0.67
CDH23-203ENST00000398788 PDCP20941 246 aa10.85□□□□□ -0.67
CDH23-203ENST00000398788 ME1P48163 572 aa10.85□□□□□ -0.67
CDH23-203ENST00000398788 CCDC43Q96MW1 224 aaKnown RBP10.85□□□□□ -0.67
CDH23-203ENST00000398788 BOLA2Q9H3K6 86 aa10.85□□□□□ -0.67
CDH23-203ENST00000398788 FBXO3Q9UK99 471 aa10.85□□□□□ -0.67
CDH23-203ENST00000398788 TSHZ3Q63HK5 1081 aa10.85□□□□□ -0.67
CDH23-203ENST00000398788 FBXO38Q6PIJ6 1188 aa10.85□□□□□ -0.67
CDH23-203ENST00000398788 BLOC1S2Q6QNY1 142 aa10.85□□□□□ -0.67
CDH23-203ENST00000398788 VPS18Q9P253 973 aa10.85□□□□□ -0.67
CDH23-203ENST00000398788 MORC2Q9Y6X9 1032 aaPredicted RBP10.85□□□□□ -0.67
CDH23-203ENST00000398788 PHACTR2O75167 634 aa10.84□□□□□ -0.67
CDH23-203ENST00000398788 IDH1O75874 414 aaKnown RBP10.84□□□□□ -0.67
CDH23-203ENST00000398788 LUZP1Q86V48 1076 aa10.84□□□□□ -0.67
CDH23-203ENST00000398788 ANKRD7Q92527 254 aa10.84□□□□□ -0.67
CDH23-203ENST00000398788 ABCF2Q9UG63 623 aa10.84□□□□□ -0.67
CDH23-203ENST00000398788 OAS2P29728 719 aaKnown RBP10.84□□□□□ -0.67
CDH23-203ENST00000398788 ZSWIM4Q9H7M6 989 aa10.84□□□□□ -0.67
CDH23-203ENST00000398788 PTPRKQ15262 1439 aa10.84□□□□□ -0.67
CDH23-203ENST00000398788 KIF2AO00139 706 aaPredicted RBP10.84□□□□□ -0.67
CDH23-203ENST00000398788 PRR29P0C7W0 189 aa10.83□□□□□ -0.68
CDH23-203ENST00000398788 DHX8Q14562 1220 aaKnown RBP10.83□□□□□ -0.68
CDH23-203ENST00000398788 KMT5BQ4FZB7 885 aa10.83□□□□□ -0.68
CDH23-203ENST00000398788 ERC1Q8IUD2 1116 aa10.83□□□□□ -0.68
CDH23-203ENST00000398788 TMX3Q96JJ7 454 aa10.83□□□□□ -0.68
CDH23-203ENST00000398788 CCDC8Q9H0W5 538 aaPredicted RBP10.83□□□□□ -0.68
CDH23-203ENST00000398788 SAMD9LQ8IVG5 1584 aa10.83□□□□□ -0.68
CDH23-203ENST00000398788 DIP2BQ9P265 1576 aa10.83□□□□□ -0.68
CDH23-203ENST00000398788 GNAT3A8MTJ3 354 aa10.83□□□□□ -0.68
CDH23-203ENST00000398788 EIF3JO75822 258 aaKnown RBP10.83□□□□□ -0.68
CDH23-203ENST00000398788 TRIM27P14373 513 aa10.83□□□□□ -0.68
CDH23-203ENST00000398788 MCM2P49736 904 aa10.83□□□□□ -0.68
CDH23-203ENST00000398788 RPAP2Q8IXW5 612 aaPredicted RBP10.83□□□□□ -0.68
CDH23-203ENST00000398788 CCDC82Q8N4S0 544 aa10.83□□□□□ -0.68
CDH23-203ENST00000398788 KAT6BQ8WYB5 2073 aa10.83□□□□□ -0.68
CDH23-203ENST00000398788 SLC20A2Q08357 652 aa10.83□□□□□ -0.68
CDH23-203ENST00000398788 TICAM2Q86XR7 235 aa10.83□□□□□ -0.68
CDH23-203ENST00000398788 SSR1P43307 286 aaKnown RBP10.82□□□□□ -0.68
CDH23-203ENST00000398788 OLFM4Q6UX06 510 aa10.82□□□□□ -0.68
CDH23-203ENST00000398788 PPM1EQ8WY54 764 aa10.82□□□□□ -0.68
CDH23-203ENST00000398788 BRMS1Q9HCU9 246 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms