RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 LIMCH1Q9UPQ0 1083 aa15.78■□□□□ 0.12
PRAME-201ENST00000398741 MAP3K2Q9Y2U5 619 aa15.78■□□□□ 0.12
PRAME-201ENST00000398741 XIRP1Q702N8 1843 aaKnown RBP15.78■□□□□ 0.12
PRAME-201ENST00000398741 IFIT2P09913 472 aaKnown RBP15.78■□□□□ 0.12
PRAME-201ENST00000398741 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.78■□□□□ 0.12
PRAME-201ENST00000398741 USP48Q86UV5 1035 aa15.78■□□□□ 0.12
PRAME-201ENST00000398741 TTC14Q96N46 770 aa15.78■□□□□ 0.12
PRAME-201ENST00000398741 NOL7Q9UMY1 257 aaKnown RBP15.78■□□□□ 0.12
PRAME-201ENST00000398741 KDM3BQ7LBC6 1761 aa15.77■□□□□ 0.12
PRAME-201ENST00000398741 TMEM94Q12767 1356 aa15.77■□□□□ 0.12
PRAME-201ENST00000398741 RPAP1Q9BWH6 1393 aaPredicted RBP15.77■□□□□ 0.12
PRAME-201ENST00000398741 RNMTO43148 476 aaKnown RBP15.77■□□□□ 0.12
PRAME-201ENST00000398741 TPM2P07951 284 aa15.77■□□□□ 0.12
PRAME-201ENST00000398741 RASEFQ8IZ41 740 aa15.77■□□□□ 0.12
PRAME-201ENST00000398741 ECHDC1Q9NTX5 307 aa15.77■□□□□ 0.12
PRAME-201ENST00000398741 CASTP20810 708 aaKnown RBP15.76■□□□□ 0.11
PRAME-201ENST00000398741 SMC3Q9UQE7 1217 aa15.76■□□□□ 0.11
PRAME-201ENST00000398741 NCAPD2Q15021 1401 aa15.76■□□□□ 0.11
PRAME-201ENST00000398741 GADD45BO75293 160 aaPredicted RBP15.76■□□□□ 0.11
PRAME-201ENST00000398741 ZSCAN22P10073 491 aaPredicted RBP15.76■□□□□ 0.11
PRAME-201ENST00000398741 KSR2Q6VAB6 950 aa15.76■□□□□ 0.11
PRAME-201ENST00000398741 CCDC39Q9UFE4 941 aa15.76■□□□□ 0.11
PRAME-201ENST00000398741 OFD1O75665 1012 aa15.75■□□□□ 0.11
PRAME-201ENST00000398741 RUFY3Q7L099 469 aa15.75■□□□□ 0.11
PRAME-201ENST00000398741 STX6O43752 255 aa15.75■□□□□ 0.11
PRAME-201ENST00000398741 GIGYF1O75420 1035 aaPredicted RBP15.75■□□□□ 0.11
PRAME-201ENST00000398741 LARP6Q9BRS8 491 aaKnown RBP15.75■□□□□ 0.11
PRAME-201ENST00000398741 LMO7Q8WWI1 1683 aa15.74■□□□□ 0.11
PRAME-201ENST00000398741 TMEM87AQ8NBN3 555 aa15.74■□□□□ 0.11
PRAME-201ENST00000398741 C19orf44Q9H6X5 657 aa15.74■□□□□ 0.11
PRAME-201ENST00000398741 PA2G4Q9UQ80 394 aaKnown RBP15.74■□□□□ 0.11
PRAME-201ENST00000398741 ATP6V1DQ9Y5K8 247 aa15.74■□□□□ 0.11
PRAME-201ENST00000398741 ZNF335Q9H4Z2 1342 aaPredicted RBP15.74■□□□□ 0.11
PRAME-201ENST00000398741 PRKCSHP14314 528 aaPredicted RBP15.74■□□□□ 0.11
PRAME-201ENST00000398741 PROSER3Q2NL68 480 aa15.74■□□□□ 0.11
PRAME-201ENST00000398741 CWF19L2Q2TBE0 894 aaKnown RBP15.74■□□□□ 0.11
PRAME-201ENST00000398741 AACSQ86V21 672 aa15.74■□□□□ 0.11
PRAME-201ENST00000398741 EVI5LQ96CN4 794 aa15.74■□□□□ 0.11
PRAME-201ENST00000398741 JAKMIP1Q96N16 626 aaKnown RBP15.74■□□□□ 0.11
PRAME-201ENST00000398741 HYPKQ9NX55 129 aa15.74■□□□□ 0.11
PRAME-201ENST00000398741 ZKSCAN5Q9Y2L8 839 aa15.74■□□□□ 0.11
PRAME-201ENST00000398741 ZNF500O60304 480 aaPredicted RBP15.73■□□□□ 0.11
PRAME-201ENST00000398741 DDX58O95786 925 aaKnown RBP15.73■□□□□ 0.11
PRAME-201ENST00000398741 GCP02774 474 aa15.73■□□□□ 0.11
PRAME-201ENST00000398741 SYT1P21579 422 aa15.73■□□□□ 0.11
PRAME-201ENST00000398741 PRPF40BQ6NWY9 871 aaKnown RBP15.73■□□□□ 0.11
PRAME-201ENST00000398741 PDRG1Q9NUG6 133 aa15.73■□□□□ 0.11
PRAME-201ENST00000398741 CNPY2Q9Y2B0 182 aa15.73■□□□□ 0.11
PRAME-201ENST00000398741 PXDNQ92626 1479 aa15.73■□□□□ 0.11
PRAME-201ENST00000398741 OVOS2A0A0G2JMS6 1433 aa15.72■□□□□ 0.11
PRAME-201ENST00000398741 CPA1P15085 419 aa15.72■□□□□ 0.11
PRAME-201ENST00000398741 MCM5P33992 734 aa15.72■□□□□ 0.11
PRAME-201ENST00000398741 PTH1RQ03431 593 aa15.72■□□□□ 0.11
PRAME-201ENST00000398741 LMOD2Q6P5Q4 547 aa15.72■□□□□ 0.11
PRAME-201ENST00000398741 ANKRD24Q8TF21 1146 aa15.72■□□□□ 0.11
PRAME-201ENST00000398741 CYP46A1Q9Y6A2 500 aa15.72■□□□□ 0.11
PRAME-201ENST00000398741 F13A1P00488 732 aa15.72■□□□□ 0.11
PRAME-201ENST00000398741 PTMAP06454 111 aaKnown RBP15.72■□□□□ 0.11
PRAME-201ENST00000398741 ZKSCAN1P17029 563 aaPredicted RBP15.72■□□□□ 0.11
PRAME-201ENST00000398741 KCNJ4P48050 445 aa15.72■□□□□ 0.11
PRAME-201ENST00000398741 G3BP1Q13283 466 aaKnown RBP eCLIP15.72■□□□□ 0.11
PRAME-201ENST00000398741 HSP90AA2PQ14568 343 aaPredicted RBP15.72■□□□□ 0.11
PRAME-201ENST00000398741 CCDC183Q5T5S1 534 aa15.72■□□□□ 0.11
PRAME-201ENST00000398741 VPS53Q5VIR6 699 aa15.72■□□□□ 0.11
PRAME-201ENST00000398741 ARHGEF25Q86VW2 580 aa15.72■□□□□ 0.11
PRAME-201ENST00000398741 LINS1Q8NG48 757 aa15.72■□□□□ 0.11
PRAME-201ENST00000398741 ZSCAN31Q96LW9 406 aaPredicted RBP15.72■□□□□ 0.11
PRAME-201ENST00000398741 ORAI2Q96SN7 254 aa15.72■□□□□ 0.11
PRAME-201ENST00000398741 GRM8O00222 908 aa15.71■□□□□ 0.11
PRAME-201ENST00000398741 CCDC83Q8IWF9 413 aa15.71■□□□□ 0.11
PRAME-201ENST00000398741 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.71■□□□□ 0.11
PRAME-201ENST00000398741 CRYBG1Q9Y4K1 1723 aa15.71■□□□□ 0.11
PRAME-201ENST00000398741 PRAMEF22A3QJZ6 481 aa15.71■□□□□ 0.1
PRAME-201ENST00000398741 HIP1O00291 1037 aa15.71■□□□□ 0.1
PRAME-201ENST00000398741 RRP9O43818 475 aaKnown RBP15.71■□□□□ 0.1
PRAME-201ENST00000398741 LETM1O95202 739 aaPredicted RBP15.71■□□□□ 0.1
PRAME-201ENST00000398741 UBE2HP62256 183 aa15.71■□□□□ 0.1
PRAME-201ENST00000398741 TPRNQ4KMQ1 711 aa15.71■□□□□ 0.1
PRAME-201ENST00000398741 FAM184AQ8NB25 1140 aa15.71■□□□□ 0.1
PRAME-201ENST00000398741 TM6SF1Q9BZW5 370 aa15.71■□□□□ 0.1
PRAME-201ENST00000398741 SH2B1Q9NRF2 756 aaPredicted RBP15.71■□□□□ 0.1
PRAME-201ENST00000398741 C1orf167Q5SNV9 1468 aa15.7■□□□□ 0.1
PRAME-201ENST00000398741 GJB2P29033 226 aa15.7■□□□□ 0.1
PRAME-201ENST00000398741 XPCQ01831 940 aaPredicted RBP15.7■□□□□ 0.1
PRAME-201ENST00000398741 AIMP1Q12904 312 aaKnown RBP15.7■□□□□ 0.1
PRAME-201ENST00000398741 CSPP1Q1MSJ5 1256 aa15.7■□□□□ 0.1
PRAME-201ENST00000398741 SUCLG2Q96I99 432 aa15.7■□□□□ 0.1
PRAME-201ENST00000398741 CCDC171Q6TFL3 1326 aa15.7■□□□□ 0.1
PRAME-201ENST00000398741 PHRF1Q9P1Y6 1649 aaKnown RBP15.7■□□□□ 0.1
PRAME-201ENST00000398741 FIBPO43427 364 aa15.7■□□□□ 0.1
PRAME-201ENST00000398741 LARGE1O95461 756 aa15.7■□□□□ 0.1
PRAME-201ENST00000398741 ADCK5Q3MIX3 580 aa15.7■□□□□ 0.1
PRAME-201ENST00000398741 BICC1Q9H694 974 aaKnown RBP15.7■□□□□ 0.1
PRAME-201ENST00000398741 ZSWIM6Q9HCJ5 1215 aa15.7■□□□□ 0.1
PRAME-201ENST00000398741 DCCP43146 1447 aa15.69■□□□□ 0.1
PRAME-201ENST00000398741 MST1RQ04912 1400 aa15.69■□□□□ 0.1
PRAME-201ENST00000398741 HEG1Q9ULI3 1381 aa15.69■□□□□ 0.1
PRAME-201ENST00000398741 RGPD2P0DJD1 1756 aa15.69■□□□□ 0.1
PRAME-201ENST00000398741 UBE2Q2Q8WVN8 375 aa15.68■□□□□ 0.1
PRAME-201ENST00000398741 DDX21Q9NR30 783 aaKnown RBP eCLIP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms