RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 HSP90AB2PQ58FF8 381 aa2.91□□□□□ -1.94
HMGN2P39-201ENST00000398005 LCE2CQ5TA81 110 aa2.91□□□□□ -1.94
HMGN2P39-201ENST00000398005 C16orf46Q6P387 395 aa2.91□□□□□ -1.94
HMGN2P39-201ENST00000398005 HS2ST1Q7LGA3 356 aa2.91□□□□□ -1.94
HMGN2P39-201ENST00000398005 CKAP2LQ8IYA6 745 aa2.91□□□□□ -1.94
HMGN2P39-201ENST00000398005 EXOC8Q8IYI6 725 aa2.91□□□□□ -1.94
HMGN2P39-201ENST00000398005 CRELD1Q96HD1 420 aa2.91□□□□□ -1.94
HMGN2P39-201ENST00000398005 SPSB2Q99619 263 aa2.91□□□□□ -1.94
HMGN2P39-201ENST00000398005 NUDT12Q9BQG2 462 aa2.91□□□□□ -1.94
HMGN2P39-201ENST00000398005 KRTAP4-6Q9BYQ5 205 aa2.91□□□□□ -1.94
HMGN2P39-201ENST00000398005 SAP130Q9H0E3 1048 aa2.91□□□□□ -1.94
HMGN2P39-201ENST00000398005 UTP3Q9NQZ2 479 aaKnown RBP eCLIP2.91□□□□□ -1.94
HMGN2P39-201ENST00000398005 EVA1BQ9NVM1 165 aa2.91□□□□□ -1.94
HMGN2P39-201ENST00000398005 GMPR2Q9P2T1 348 aaKnown RBP2.91□□□□□ -1.94
HMGN2P39-201ENST00000398005 DDX41Q9UJV9 622 aaKnown RBP2.91□□□□□ -1.94
HMGN2P39-201ENST00000398005 COL4A3BPQ9Y5P4 624 aa2.91□□□□□ -1.94
HMGN2P39-201ENST00000398005 PPP1R12AO14974 1030 aaPredicted RBP2.9□□□□□ -1.95
HMGN2P39-201ENST00000398005 ZBTB24O43167 697 aaPredicted RBP2.9□□□□□ -1.95
HMGN2P39-201ENST00000398005 DNAJC6O75061 913 aa2.9□□□□□ -1.95
HMGN2P39-201ENST00000398005 WFS1O76024 890 aa2.9□□□□□ -1.95
HMGN2P39-201ENST00000398005 PARNO95453 639 aaKnown RBP2.9□□□□□ -1.95
HMGN2P39-201ENST00000398005 RPIAP49247 311 aa2.9□□□□□ -1.95
HMGN2P39-201ENST00000398005 RAB15P59190 212 aa2.9□□□□□ -1.95
HMGN2P39-201ENST00000398005 BRICD5Q6PL45 260 aa2.9□□□□□ -1.95
HMGN2P39-201ENST00000398005 FAM160A2Q8N612 972 aaPredicted RBP2.9□□□□□ -1.95
HMGN2P39-201ENST00000398005 UBE2Q2Q8WVN8 375 aa2.9□□□□□ -1.95
HMGN2P39-201ENST00000398005 ALKBH8Q96BT7 664 aaKnown RBP2.9□□□□□ -1.95
HMGN2P39-201ENST00000398005 THAP11Q96EK4 314 aa2.9□□□□□ -1.95
HMGN2P39-201ENST00000398005 SLC10A4Q96EP9 437 aa2.9□□□□□ -1.95
HMGN2P39-201ENST00000398005 FAM129BQ96TA1 746 aa2.9□□□□□ -1.95
HMGN2P39-201ENST00000398005 BRINP2Q9C0B6 783 aa2.9□□□□□ -1.95
HMGN2P39-201ENST00000398005 NEUROD4Q9HD90 331 aa2.9□□□□□ -1.95
HMGN2P39-201ENST00000398005 ZNF358Q9NW07 568 aa2.9□□□□□ -1.95
HMGN2P39-201ENST00000398005 IFT57Q9NWB7 429 aa2.9□□□□□ -1.95
HMGN2P39-201ENST00000398005 SLC52A1Q9NWF4 448 aa2.9□□□□□ -1.95
HMGN2P39-201ENST00000398005 STIM2Q9P246 746 aa2.9□□□□□ -1.95
HMGN2P39-201ENST00000398005 GGT7Q9UJ14 662 aa2.9□□□□□ -1.95
HMGN2P39-201ENST00000398005 SPG7Q9UQ90 795 aa2.9□□□□□ -1.95
HMGN2P39-201ENST00000398005 FCF1Q9Y324 198 aaKnown RBP2.9□□□□□ -1.95
HMGN2P39-201ENST00000398005 GTF3C5Q9Y5Q8 519 aaPredicted RBP2.9□□□□□ -1.95
HMGN2P39-201ENST00000398005 AK5Q9Y6K8 562 aa2.9□□□□□ -1.95
HMGN2P39-201ENST00000398005 ATAD2Q6PL18 1390 aa2.89□□□□□ -1.95
HMGN2P39-201ENST00000398005 ESPNB1AK53 854 aa2.89□□□□□ -1.95
HMGN2P39-201ENST00000398005 C11orf95C9JLR9 678 aaPredicted RBP2.89□□□□□ -1.95
HMGN2P39-201ENST00000398005 BACH1O14867 736 aa2.89□□□□□ -1.95
HMGN2P39-201ENST00000398005 AXIN1O15169 862 aa2.89□□□□□ -1.95
HMGN2P39-201ENST00000398005 PEX14O75381 377 aa2.89□□□□□ -1.95
HMGN2P39-201ENST00000398005 MAP4K4O95819 1239 aaPredicted RBP2.89□□□□□ -1.95
HMGN2P39-201ENST00000398005 S100BP04271 92 aaPredicted RBP2.89□□□□□ -1.95
HMGN2P39-201ENST00000398005 SSBP05455 408 aaKnown RBP eCLIP2.89□□□□□ -1.95
HMGN2P39-201ENST00000398005 FGRP09769 529 aa2.89□□□□□ -1.95
HMGN2P39-201ENST00000398005 XRCC5P13010 732 aaKnown RBP2.89□□□□□ -1.95
HMGN2P39-201ENST00000398005 EIF4BP23588 611 aaKnown RBP2.89□□□□□ -1.95
HMGN2P39-201ENST00000398005 MZF1P28698 734 aaPredicted RBP2.89□□□□□ -1.95
HMGN2P39-201ENST00000398005 SMCPP49901 116 aaPredicted RBP2.89□□□□□ -1.95
HMGN2P39-201ENST00000398005 CHMP4BP1P59074 171 aa2.89□□□□□ -1.95
HMGN2P39-201ENST00000398005 SH3BP5LQ7L8J4 393 aa2.89□□□□□ -1.95
HMGN2P39-201ENST00000398005 ATCAYQ86WG3 371 aa2.89□□□□□ -1.95
HMGN2P39-201ENST00000398005 TNS4Q8IZW8 715 aa2.89□□□□□ -1.95
HMGN2P39-201ENST00000398005 ABTB2Q8N961 1025 aa2.89□□□□□ -1.95
HMGN2P39-201ENST00000398005 MORC4Q8TE76 937 aa2.89□□□□□ -1.95
HMGN2P39-201ENST00000398005 FRMD6Q96NE9 622 aa2.89□□□□□ -1.95
HMGN2P39-201ENST00000398005 SRPK1Q96SB4 655 aaKnown RBP2.89□□□□□ -1.95
HMGN2P39-201ENST00000398005 SLKQ9H2G2 1235 aaPredicted RBP2.89□□□□□ -1.95
HMGN2P39-201ENST00000398005 SPC25Q9HBM1 224 aa2.89□□□□□ -1.95
HMGN2P39-201ENST00000398005 PCDH12Q9NPG4 1184 aa2.89□□□□□ -1.95
HMGN2P39-201ENST00000398005 PRDM9Q9NQV7 894 aa2.89□□□□□ -1.95
HMGN2P39-201ENST00000398005 CHPF2Q9P2E5 772 aa2.89□□□□□ -1.95
HMGN2P39-201ENST00000398005 G3BP2Q9UN86 482 aaKnown RBP2.89□□□□□ -1.95
HMGN2P39-201ENST00000398005 POLIQ9UNA4 740 aa2.89□□□□□ -1.95
HMGN2P39-201ENST00000398005 SALL2Q9Y467 1007 aaPredicted RBP2.89□□□□□ -1.95
HMGN2P39-201ENST00000398005 U2SURPO15042 1029 aaKnown RBP2.88□□□□□ -1.95
HMGN2P39-201ENST00000398005 WIPF1O43516 503 aa2.88□□□□□ -1.95
HMGN2P39-201ENST00000398005 PPP1R12BO60237 982 aaPredicted RBP2.88□□□□□ -1.95
HMGN2P39-201ENST00000398005 CD2BP2O95400 341 aaKnown RBP2.88□□□□□ -1.95
HMGN2P39-201ENST00000398005 IGHA2P01877 340 aa2.88□□□□□ -1.95
HMGN2P39-201ENST00000398005 CTSHP09668 335 aa2.88□□□□□ -1.95
HMGN2P39-201ENST00000398005 ATF4P18848 351 aaPredicted RBP2.88□□□□□ -1.95
HMGN2P39-201ENST00000398005 DNM1Q05193 864 aaKnown RBP2.88□□□□□ -1.95
HMGN2P39-201ENST00000398005 PAK2Q13177 524 aa2.88□□□□□ -1.95
HMGN2P39-201ENST00000398005 CTC1Q2NKJ3 1217 aa2.88□□□□□ -1.95
HMGN2P39-201ENST00000398005 COX20Q5RI15 118 aa2.88□□□□□ -1.95
HMGN2P39-201ENST00000398005 TMED8Q6PL24 325 aaPredicted RBP2.88□□□□□ -1.95
HMGN2P39-201ENST00000398005 TICAM2Q86XR7 235 aa2.88□□□□□ -1.95
HMGN2P39-201ENST00000398005 CYP4X1Q8N118 509 aa2.88□□□□□ -1.95
HMGN2P39-201ENST00000398005 CCDC24Q8N4L8 307 aa2.88□□□□□ -1.95
HMGN2P39-201ENST00000398005 TTC16Q8NEE8 873 aa2.88□□□□□ -1.95
HMGN2P39-201ENST00000398005 FBF1Q8TES7 1133 aa2.88□□□□□ -1.95
HMGN2P39-201ENST00000398005 GPRASP2Q96D09 838 aa2.88□□□□□ -1.95
HMGN2P39-201ENST00000398005 CCDC136Q96JN2 1154 aa2.88□□□□□ -1.95
HMGN2P39-201ENST00000398005 CSRNP1Q96S65 589 aa2.88□□□□□ -1.95
HMGN2P39-201ENST00000398005 TRIM55Q9BYV6 548 aa2.88□□□□□ -1.95
HMGN2P39-201ENST00000398005 UNC93B1Q9H1C4 597 aa2.88□□□□□ -1.95
HMGN2P39-201ENST00000398005 TSPAN10Q9H1Z9 355 aaPredicted RBP2.88□□□□□ -1.95
HMGN2P39-201ENST00000398005 SRA1Q9HD15 236 aaKnown RBP2.88□□□□□ -1.95
HMGN2P39-201ENST00000398005 SERTAD1Q9UHV2 236 aa2.88□□□□□ -1.95
HMGN2P39-201ENST00000398005 CCDC194A0A1B0GVG4 234 aa2.87□□□□□ -1.95
HMGN2P39-201ENST00000398005 ENPP3O14638 875 aa2.87□□□□□ -1.95
HMGN2P39-201ENST00000398005 TNFRSF10BO14763 440 aa2.87□□□□□ -1.95
HMGN2P39-201ENST00000398005 DXOO77932 396 aaKnown RBP2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms