RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 LINS1Q8NG48 757 aa22.23■■□□□ 1.15
CHRFAM7A-202ENST00000397827 KAZALD1Q96I82 304 aa22.23■■□□□ 1.15
CHRFAM7A-202ENST00000397827 SIPA1L3O60292 1781 aaPredicted RBP22.23■■□□□ 1.15
CHRFAM7A-202ENST00000397827 NPHP3Q7Z494 1330 aa22.23■■□□□ 1.15
CHRFAM7A-202ENST00000397827 SLC52A2Q9HAB3 445 aa22.22■■□□□ 1.15
CHRFAM7A-202ENST00000397827 SPG7Q9UQ90 795 aa22.22■■□□□ 1.15
CHRFAM7A-202ENST00000397827 CUL4AQ13619 759 aa22.22■■□□□ 1.15
CHRFAM7A-202ENST00000397827 BICC1Q9H694 974 aaKnown RBP22.22■■□□□ 1.15
CHRFAM7A-202ENST00000397827 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.22■■□□□ 1.15
CHRFAM7A-202ENST00000397827 CSB-PGBD3P0DP91 1061 aa22.21■■□□□ 1.15
CHRFAM7A-202ENST00000397827 CHRNA2Q15822 529 aa22.21■■□□□ 1.15
CHRFAM7A-202ENST00000397827 CAVIN1Q6NZI2 390 aaKnown RBP22.21■■□□□ 1.15
CHRFAM7A-202ENST00000397827 RAD50Q92878 1312 aa22.21■■□□□ 1.15
CHRFAM7A-202ENST00000397827 KDM6AO15550 1401 aaPredicted RBP22.21■■□□□ 1.15
CHRFAM7A-202ENST00000397827 GLRX3O76003 335 aaKnown RBP22.21■■□□□ 1.15
CHRFAM7A-202ENST00000397827 DDX58O95786 925 aaKnown RBP22.21■■□□□ 1.15
CHRFAM7A-202ENST00000397827 RIC3Q7Z5B4 369 aa22.21■■□□□ 1.15
CHRFAM7A-202ENST00000397827 KIF1AQ12756 1690 aa22.21■■□□□ 1.15
CHRFAM7A-202ENST00000397827 PHKG2P15735 406 aa22.21■■□□□ 1.15
CHRFAM7A-202ENST00000397827 LSG1Q9H089 658 aaKnown RBP22.21■■□□□ 1.15
CHRFAM7A-202ENST00000397827 TTC41PQ6P2S7 1318 aa22.2■■□□□ 1.14
CHRFAM7A-202ENST00000397827 TATP17735 454 aaPredicted RBP22.2■■□□□ 1.14
CHRFAM7A-202ENST00000397827 PIP4K2AP48426 406 aaPredicted RBP22.2■■□□□ 1.14
CHRFAM7A-202ENST00000397827 USP42Q9H9J4 1324 aaKnown RBP22.2■■□□□ 1.14
CHRFAM7A-202ENST00000397827 TMEM94Q12767 1356 aa22.2■■□□□ 1.14
CHRFAM7A-202ENST00000397827 IGKV5-2P06315 115 aa22.2■■□□□ 1.14
CHRFAM7A-202ENST00000397827 IFIT2P09913 472 aaKnown RBP22.2■■□□□ 1.14
CHRFAM7A-202ENST00000397827 IL17RAQ96F46 866 aa22.2■■□□□ 1.14
CHRFAM7A-202ENST00000397827 ALS2Q96Q42 1657 aa22.19■■□□□ 1.14
CHRFAM7A-202ENST00000397827 RASEFQ8IZ41 740 aa22.19■■□□□ 1.14
CHRFAM7A-202ENST00000397827 ECHDC1Q9NTX5 307 aa22.19■■□□□ 1.14
CHRFAM7A-202ENST00000397827 MEGF6O75095 1541 aa22.19■■□□□ 1.14
CHRFAM7A-202ENST00000397827 AACSQ86V21 672 aa22.19■■□□□ 1.14
CHRFAM7A-202ENST00000397827 ZNF496Q96IT1 587 aaPredicted RBP22.19■■□□□ 1.14
CHRFAM7A-202ENST00000397827 SNX14Q9Y5W7 946 aa22.19■■□□□ 1.14
CHRFAM7A-202ENST00000397827 MST1RQ04912 1400 aa22.18■■□□□ 1.14
CHRFAM7A-202ENST00000397827 KIAA1211Q6ZU35 1233 aa22.18■■□□□ 1.14
CHRFAM7A-202ENST00000397827 SIL1Q9H173 461 aa22.18■■□□□ 1.14
CHRFAM7A-202ENST00000397827 EPB41L2O43491 1005 aaKnown RBP22.17■■□□□ 1.14
CHRFAM7A-202ENST00000397827 COPS6Q7L5N1 327 aa22.17■■□□□ 1.14
CHRFAM7A-202ENST00000397827 GPT2Q8TD30 523 aa22.17■■□□□ 1.14
CHRFAM7A-202ENST00000397827 XAGE3Q8WTP9 111 aa22.17■■□□□ 1.14
CHRFAM7A-202ENST00000397827 LARP6Q9BRS8 491 aaKnown RBP22.17■■□□□ 1.14
CHRFAM7A-202ENST00000397827 DIAPH3Q9NSV4 1193 aa22.17■■□□□ 1.14
CHRFAM7A-202ENST00000397827 ADAMTS7Q9UKP4 1686 aa22.17■■□□□ 1.14
CHRFAM7A-202ENST00000397827 SASH1O94885 1247 aa22.17■■□□□ 1.14
CHRFAM7A-202ENST00000397827 KLHDC4Q8TBB5 520 aa22.17■■□□□ 1.14
CHRFAM7A-202ENST00000397827 INTS4Q96HW7 963 aaKnown RBP22.17■■□□□ 1.14
CHRFAM7A-202ENST00000397827 BRD1O95696 1058 aa22.16■■□□□ 1.14
CHRFAM7A-202ENST00000397827 ERC1Q8IUD2 1116 aa22.16■■□□□ 1.14
CHRFAM7A-202ENST00000397827 HDAC5Q9UQL6 1122 aa22.16■■□□□ 1.14
CHRFAM7A-202ENST00000397827 CCDC8Q9H0W5 538 aaPredicted RBP22.16■■□□□ 1.14
CHRFAM7A-202ENST00000397827 PDCL3Q9H2J4 239 aa22.16■■□□□ 1.14
CHRFAM7A-202ENST00000397827 RBM27Q9P2N5 1060 aaKnown RBP22.16■■□□□ 1.14
CHRFAM7A-202ENST00000397827 USP16Q9Y5T5 823 aa22.16■■□□□ 1.14
CHRFAM7A-202ENST00000397827 ZSCAN23Q3MJ62 389 aa22.16■■□□□ 1.14
CHRFAM7A-202ENST00000397827 IFNL2Q8IZJ0 200 aa22.16■■□□□ 1.14
CHRFAM7A-202ENST00000397827 UTYO14607 1347 aa22.15■■□□□ 1.14
CHRFAM7A-202ENST00000397827 C5P01031 1676 aa22.15■■□□□ 1.14
CHRFAM7A-202ENST00000397827 FOXD4L6Q3SYB3 417 aaPredicted RBP22.15■■□□□ 1.14
CHRFAM7A-202ENST00000397827 FOXD4L3Q6VB84 417 aaPredicted RBP22.15■■□□□ 1.14
CHRFAM7A-202ENST00000397827 JARID2Q92833 1246 aaPredicted RBP22.15■■□□□ 1.14
CHRFAM7A-202ENST00000397827 EAF2Q96CJ1 260 aaPredicted RBP22.15■■□□□ 1.14
CHRFAM7A-202ENST00000397827 MYD88Q99836 296 aa22.15■■□□□ 1.14
CHRFAM7A-202ENST00000397827 G3BP1Q13283 466 aaKnown RBP eCLIP22.15■■□□□ 1.14
CHRFAM7A-202ENST00000397827 LARP1Q6PKG0 1096 aaKnown RBP22.15■■□□□ 1.14
CHRFAM7A-202ENST00000397827 PRDM4Q9UKN5 801 aa22.15■■□□□ 1.14
CHRFAM7A-202ENST00000397827 SCN11AQ9UI33 1791 aa22.14■■□□□ 1.14
CHRFAM7A-202ENST00000397827 CYP27B1O15528 508 aa22.14■■□□□ 1.14
CHRFAM7A-202ENST00000397827 CPA1P15085 419 aa22.14■■□□□ 1.14
CHRFAM7A-202ENST00000397827 GPATCH3Q96I76 525 aa22.14■■□□□ 1.14
CHRFAM7A-202ENST00000397827 NSFL1CQ9UNZ2 370 aaKnown RBP22.14■■□□□ 1.14
CHRFAM7A-202ENST00000397827 NEURL1BA8MQ27 555 aa22.14■■□□□ 1.13
CHRFAM7A-202ENST00000397827 PTH1RQ03431 593 aa22.14■■□□□ 1.13
CHRFAM7A-202ENST00000397827 TLR7Q9NYK1 1049 aaKnown RBP22.14■■□□□ 1.13
CHRFAM7A-202ENST00000397827 FGD1P98174 961 aa22.13■■□□□ 1.13
CHRFAM7A-202ENST00000397827 NEXNQ0ZGT2 675 aa22.13■■□□□ 1.13
CHRFAM7A-202ENST00000397827 CRYBG1Q9Y4K1 1723 aa22.13■■□□□ 1.13
CHRFAM7A-202ENST00000397827 EPHA10Q5JZY3 1008 aa22.13■■□□□ 1.13
CHRFAM7A-202ENST00000397827 AK2P54819 239 aa22.12■■□□□ 1.13
CHRFAM7A-202ENST00000397827 TTC5Q8N0Z6 440 aa22.12■■□□□ 1.13
CHRFAM7A-202ENST00000397827 GCKRQ14397 625 aa22.12■■□□□ 1.13
CHRFAM7A-202ENST00000397827 TTC14Q96N46 770 aa22.12■■□□□ 1.13
CHRFAM7A-202ENST00000397827 LMTK3Q96Q04 1460 aa22.12■■□□□ 1.13
CHRFAM7A-202ENST00000397827 NASPP49321 788 aaPredicted RBP22.11■■□□□ 1.13
CHRFAM7A-202ENST00000397827 ZNF445P59923 1031 aa22.11■■□□□ 1.13
CHRFAM7A-202ENST00000397827 RUFY2Q8WXA3 655 aa22.11■■□□□ 1.13
CHRFAM7A-202ENST00000397827 ANKRD13DQ6ZTN6 518 aa22.1■■□□□ 1.13
CHRFAM7A-202ENST00000397827 EVI5LQ96CN4 794 aa22.1■■□□□ 1.13
CHRFAM7A-202ENST00000397827 METTL22Q9BUU2 404 aaPredicted RBP22.1■■□□□ 1.13
CHRFAM7A-202ENST00000397827 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.1■■□□□ 1.13
CHRFAM7A-202ENST00000397827 CASTP20810 708 aaKnown RBP22.1■■□□□ 1.13
CHRFAM7A-202ENST00000397827 DCAF5Q96JK2 942 aa22.1■■□□□ 1.13
CHRFAM7A-202ENST00000397827 STRCP1A6NGW2 1772 aa22.1■■□□□ 1.13
CHRFAM7A-202ENST00000397827 COL18A1P39060 1754 aa22.1■■□□□ 1.13
CHRFAM7A-202ENST00000397827 SNRPA1P09661 255 aaKnown RBP22.1■■□□□ 1.13
CHRFAM7A-202ENST00000397827 PRPF40BQ6NWY9 871 aaKnown RBP22.1■■□□□ 1.13
CHRFAM7A-202ENST00000397827 RUFY3Q7L099 469 aa22.1■■□□□ 1.13
CHRFAM7A-202ENST00000397827 FAM227BQ96M60 508 aa22.1■■□□□ 1.13
CHRFAM7A-202ENST00000397827 ADCK5Q3MIX3 580 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms