RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 C9orf78Q9NZ63 289 aaPredicted RBP7.15□□□□□ -1.27
PTPRD-206ENST00000397617 LMOD2Q6P5Q4 547 aa7.14□□□□□ -1.27
PTPRD-206ENST00000397617 GBP4Q96PP9 640 aa7.14□□□□□ -1.27
PTPRD-206ENST00000397617 IL15P40933 162 aaPredicted RBP7.14□□□□□ -1.27
PTPRD-206ENST00000397617 GLI3P10071 1580 aa7.14□□□□□ -1.27
PTPRD-206ENST00000397617 SLIT2O94813 1529 aa7.14□□□□□ -1.27
PTPRD-206ENST00000397617 PI4KAP2A4QPH2 592 aa7.14□□□□□ -1.27
PTPRD-206ENST00000397617 PI4KAP1Q8N8J0 262 aa7.14□□□□□ -1.27
PTPRD-206ENST00000397617 GCKRQ14397 625 aa7.14□□□□□ -1.27
PTPRD-206ENST00000397617 RNF20Q5VTR2 975 aa7.14□□□□□ -1.27
PTPRD-206ENST00000397617 RHPN1Q8TCX5 695 aa7.14□□□□□ -1.27
PTPRD-206ENST00000397617 LAS1LQ9Y4W2 734 aaKnown RBP7.14□□□□□ -1.27
PTPRD-206ENST00000397617 ZNF496Q96IT1 587 aaPredicted RBP7.14□□□□□ -1.27
PTPRD-206ENST00000397617 TEX2Q8IWB9 1127 aa7.13□□□□□ -1.27
PTPRD-206ENST00000397617 SH2B1Q9NRF2 756 aaPredicted RBP7.13□□□□□ -1.27
PTPRD-206ENST00000397617 ANKRD1Q15327 319 aa7.13□□□□□ -1.27
PTPRD-206ENST00000397617 LNPKQ9C0E8 428 aa7.13□□□□□ -1.27
PTPRD-206ENST00000397617 ANTXR1Q9H6X2 564 aa7.13□□□□□ -1.27
PTPRD-206ENST00000397617 ANO8Q9HCE9 1232 aaPredicted RBP7.13□□□□□ -1.27
PTPRD-206ENST00000397617 A0A087WZG4 1122 aa7.13□□□□□ -1.27
PTPRD-206ENST00000397617 CERS3Q8IU89 383 aa7.13□□□□□ -1.27
PTPRD-206ENST00000397617 PDS5AQ29RF7 1337 aaKnown RBP7.13□□□□□ -1.27
PTPRD-206ENST00000397617 NUTM2FA1L443 756 aa7.13□□□□□ -1.27
PTPRD-206ENST00000397617 NPM2Q86SE8 214 aaKnown RBP7.13□□□□□ -1.27
PTPRD-206ENST00000397617 EVI5LQ96CN4 794 aa7.13□□□□□ -1.27
PTPRD-206ENST00000397617 WDR19Q8NEZ3 1342 aa7.13□□□□□ -1.27
PTPRD-206ENST00000397617 CSB-PGBD3P0DP91 1061 aa7.13□□□□□ -1.27
PTPRD-206ENST00000397617 CNTROBQ8N137 903 aa7.13□□□□□ -1.27
PTPRD-206ENST00000397617 AXIN2Q9Y2T1 843 aa7.13□□□□□ -1.27
PTPRD-206ENST00000397617 KDM4FA0A1W2PPD8 638 aa7.12□□□□□ -1.27
PTPRD-206ENST00000397617 CUL4AQ13619 759 aa7.12□□□□□ -1.27
PTPRD-206ENST00000397617 GIGYF2Q6Y7W6 1299 aaKnown RBP7.12□□□□□ -1.27
PTPRD-206ENST00000397617 ZSCAN31Q96LW9 406 aaPredicted RBP7.12□□□□□ -1.27
PTPRD-206ENST00000397617 H7C1W4 665 aa7.12□□□□□ -1.27
PTPRD-206ENST00000397617 SRGAP3O43295 1099 aa7.12□□□□□ -1.27
PTPRD-206ENST00000397617 ZMYM6O95789 1325 aa7.12□□□□□ -1.27
PTPRD-206ENST00000397617 CAVIN2O95810 425 aa7.12□□□□□ -1.27
PTPRD-206ENST00000397617 ATP5JP18859 108 aa7.12□□□□□ -1.27
PTPRD-206ENST00000397617 AKAP2Q9Y2D5 859 aa7.12□□□□□ -1.27
PTPRD-206ENST00000397617 PCCAP05165 728 aaPredicted RBP7.12□□□□□ -1.27
PTPRD-206ENST00000397617 G3BP1Q13283 466 aaKnown RBP eCLIP7.12□□□□□ -1.27
PTPRD-206ENST00000397617 RGPD5Q99666 1765 aa7.12□□□□□ -1.27
PTPRD-206ENST00000397617 MBD3O95983 291 aa7.12□□□□□ -1.27
PTPRD-206ENST00000397617 HMGB1P09429 215 aaKnown RBP7.12□□□□□ -1.27
PTPRD-206ENST00000397617 TBC1D9Q6ZT07 1266 aa7.12□□□□□ -1.27
PTPRD-206ENST00000397617 PPP1R42Q7Z4L9 355 aa7.12□□□□□ -1.27
PTPRD-206ENST00000397617 SGSM2O43147 1006 aa7.12□□□□□ -1.27
PTPRD-206ENST00000397617 ZKSCAN1P17029 563 aaPredicted RBP7.12□□□□□ -1.27
PTPRD-206ENST00000397617 ADRA2BP18089 450 aa7.12□□□□□ -1.27
PTPRD-206ENST00000397617 PDIA6Q15084 440 aa7.12□□□□□ -1.27
PTPRD-206ENST00000397617 ISCA1Q9BUE6 129 aa7.12□□□□□ -1.27
PTPRD-206ENST00000397617 DDIT3P35638 169 aa7.11□□□□□ -1.27
PTPRD-206ENST00000397617 RCAN1P53805 252 aa7.11□□□□□ -1.27
PTPRD-206ENST00000397617 DCTN1Q14203 1278 aa7.11□□□□□ -1.27
PTPRD-206ENST00000397617 MYH3P11055 1940 aa7.11□□□□□ -1.27
PTPRD-206ENST00000397617 CABP4P57796 275 aa7.11□□□□□ -1.27
PTPRD-206ENST00000397617 ATL3Q6DD88 541 aa7.11□□□□□ -1.27
PTPRD-206ENST00000397617 KIAA1211Q6ZU35 1233 aa7.11□□□□□ -1.27
PTPRD-206ENST00000397617 NEURL1BA8MQ27 555 aa7.11□□□□□ -1.27
PTPRD-206ENST00000397617 COL16A1Q07092 1604 aaPredicted RBP7.11□□□□□ -1.27
PTPRD-206ENST00000397617 KCPQ6ZWJ8 1503 aa7.11□□□□□ -1.27
PTPRD-206ENST00000397617 TOM1L2Q6ZVM7 507 aa7.11□□□□□ -1.27
PTPRD-206ENST00000397617 RREB1Q92766 1687 aa7.1□□□□□ -1.27
PTPRD-206ENST00000397617 RC3H1Q5TC82 1133 aaKnown RBP7.1□□□□□ -1.27
PTPRD-206ENST00000397617 RGPD2P0DJD1 1756 aa7.1□□□□□ -1.27
PTPRD-206ENST00000397617 SURF6O75683 361 aaKnown RBP7.1□□□□□ -1.27
PTPRD-206ENST00000397617 CHPF2Q9P2E5 772 aa7.1□□□□□ -1.27
PTPRD-206ENST00000397617 PSMA5P28066 241 aa7.1□□□□□ -1.27
PTPRD-206ENST00000397617 K7ELQ4 463 aaPredicted RBP7.1□□□□□ -1.27
PTPRD-206ENST00000397617 HSPA4P34932 840 aa7.1□□□□□ -1.27
PTPRD-206ENST00000397617 CWC25Q9NXE8 425 aaPredicted RBP7.1□□□□□ -1.27
PTPRD-206ENST00000397617 USPL1Q5W0Q7 1092 aa7.1□□□□□ -1.27
PTPRD-206ENST00000397617 USP26Q9BXU7 913 aa7.1□□□□□ -1.27
PTPRD-206ENST00000397617 LRRFIP2Q9Y608 721 aaKnown RBP7.1□□□□□ -1.27
PTPRD-206ENST00000397617 CCDC171Q6TFL3 1326 aa7.1□□□□□ -1.27
PTPRD-206ENST00000397617 PLEKHG5O94827 1062 aa7.1□□□□□ -1.27
PTPRD-206ENST00000397617 SDSP20132 328 aa7.1□□□□□ -1.27
PTPRD-206ENST00000397617 FBLN1P23142 703 aa7.1□□□□□ -1.27
PTPRD-206ENST00000397617 WNK3Q9BYP7 1800 aa7.09□□□□□ -1.27
PTPRD-206ENST00000397617 ELL2O00472 640 aaPredicted RBP7.09□□□□□ -1.27
PTPRD-206ENST00000397617 ESYT1Q9BSJ8 1104 aa7.09□□□□□ -1.27
PTPRD-206ENST00000397617 EXOC5O00471 708 aa7.09□□□□□ -1.27
PTPRD-206ENST00000397617 PCP11498 1178 aaKnown RBP7.09□□□□□ -1.27
PTPRD-206ENST00000397617 TCIRG1Q13488 830 aa7.09□□□□□ -1.27
PTPRD-206ENST00000397617 NOL10Q9BSC4 688 aaKnown RBP7.09□□□□□ -1.27
PTPRD-206ENST00000397617 ONECUT3O60422 494 aaPredicted RBP7.09□□□□□ -1.27
PTPRD-206ENST00000397617 PPP2R5BQ15173 497 aa7.09□□□□□ -1.27
PTPRD-206ENST00000397617 TBC1D2Q9BYX2 928 aa7.09□□□□□ -1.27
PTPRD-206ENST00000397617 TMOD3Q9NYL9 352 aa7.09□□□□□ -1.27
PTPRD-206ENST00000397617 FNBP4Q8N3X1 1017 aaPredicted RBP7.09□□□□□ -1.27
PTPRD-206ENST00000397617 ZNF652Q9Y2D9 606 aa7.09□□□□□ -1.27
PTPRD-206ENST00000397617 PALLDQ8WX93 1383 aa7.09□□□□□ -1.27
PTPRD-206ENST00000397617 DUOX1Q9NRD9 1551 aa7.09□□□□□ -1.27
PTPRD-206ENST00000397617 CHMLP26374 656 aa7.09□□□□□ -1.27
PTPRD-206ENST00000397617 ZC3H6P61129 1189 aaKnown RBP7.09□□□□□ -1.27
PTPRD-206ENST00000397617 ZSCAN25Q6NSZ9 544 aa7.09□□□□□ -1.28
PTPRD-206ENST00000397617 MPRIPQ6WCQ1 1025 aa7.09□□□□□ -1.28
PTPRD-206ENST00000397617 CASP7P55210 303 aa7.08□□□□□ -1.28
PTPRD-206ENST00000397617 CSPP1Q1MSJ5 1256 aa7.08□□□□□ -1.28
PTPRD-206ENST00000397617 LGR6Q9HBX8 967 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms