RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 NEO1Q92859 1461 aa13.28□□□□□ -0.28
IFT140-202ENST00000397417 TMEM94Q12767 1356 aa13.28□□□□□ -0.28
IFT140-202ENST00000397417 TOM1O60784 492 aa13.28□□□□□ -0.28
IFT140-202ENST00000397417 NIP7Q9Y221 180 aaKnown RBP eCLIP13.28□□□□□ -0.28
IFT140-202ENST00000397417 CSPP1Q1MSJ5 1256 aa13.28□□□□□ -0.28
IFT140-202ENST00000397417 C6orf229H3BNL8 230 aa13.28□□□□□ -0.28
IFT140-202ENST00000397417 BMP2KLQ5H9B9 411 aa13.28□□□□□ -0.28
IFT140-202ENST00000397417 SYNMO15061 1565 aa13.28□□□□□ -0.28
IFT140-202ENST00000397417 F8W031 263 aaPredicted RBP13.27□□□□□ -0.28
IFT140-202ENST00000397417 CAMK4Q16566 473 aa13.27□□□□□ -0.28
IFT140-202ENST00000397417 EDC4Q6P2E9 1401 aaKnown RBP13.27□□□□□ -0.29
IFT140-202ENST00000397417 TPD52L1Q16890 204 aaPredicted RBP13.27□□□□□ -0.29
IFT140-202ENST00000397417 HDAC1Q13547 482 aaPredicted RBP13.27□□□□□ -0.29
IFT140-202ENST00000397417 SPC24Q8NBT2 197 aa13.27□□□□□ -0.29
IFT140-202ENST00000397417 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.26□□□□□ -0.29
IFT140-202ENST00000397417 ANKRD18BA2A2Z9 1011 aa13.26□□□□□ -0.29
IFT140-202ENST00000397417 TRPM2O94759 1503 aa13.26□□□□□ -0.29
IFT140-202ENST00000397417 ME1P48163 572 aa13.26□□□□□ -0.29
IFT140-202ENST00000397417 ATP8B2P98198 1209 aa13.26□□□□□ -0.29
IFT140-202ENST00000397417 PLEKHM2Q8IWE5 1019 aa13.26□□□□□ -0.29
IFT140-202ENST00000397417 TBC1D32Q96NH3 1257 aa13.26□□□□□ -0.29
IFT140-202ENST00000397417 CCDC73Q6ZRK6 1079 aa13.25□□□□□ -0.29
IFT140-202ENST00000397417 SF3B2Q13435 895 aaKnown RBP13.25□□□□□ -0.29
IFT140-202ENST00000397417 DZIP3Q86Y13 1208 aaKnown RBP13.25□□□□□ -0.29
IFT140-202ENST00000397417 LINS1Q8NG48 757 aa13.25□□□□□ -0.29
IFT140-202ENST00000397417 LAMC1P11047 1609 aa13.25□□□□□ -0.29
IFT140-202ENST00000397417 KDM5AP29375 1690 aaKnown RBP13.25□□□□□ -0.29
IFT140-202ENST00000397417 NASPP49321 788 aaPredicted RBP13.25□□□□□ -0.29
IFT140-202ENST00000397417 TFCP2Q12800 502 aa13.25□□□□□ -0.29
IFT140-202ENST00000397417 SAFBQ15424 915 aaKnown RBP eCLIP13.25□□□□□ -0.29
IFT140-202ENST00000397417 ARHGAP45Q92619 1136 aa13.25□□□□□ -0.29
IFT140-202ENST00000397417 PUS7Q96PZ0 661 aaKnown RBP13.25□□□□□ -0.29
IFT140-202ENST00000397417 RANBP6O60518 1105 aaKnown RBP13.24□□□□□ -0.29
IFT140-202ENST00000397417 CCDC129Q6ZRS4 1044 aa13.24□□□□□ -0.29
IFT140-202ENST00000397417 TRMT1LQ7Z2T5 733 aaKnown RBP13.24□□□□□ -0.29
IFT140-202ENST00000397417 GNL3LQ9NVN8 582 aaKnown RBP13.24□□□□□ -0.29
IFT140-202ENST00000397417 SKOR2Q2VWA4 1001 aaPredicted RBP13.24□□□□□ -0.29
IFT140-202ENST00000397417 NBPF5PQ86XG9 351 aaPredicted RBP13.24□□□□□ -0.29
IFT140-202ENST00000397417 PLEKHF1Q96S99 279 aa13.24□□□□□ -0.29
IFT140-202ENST00000397417 DCTPP1Q9H773 170 aa13.24□□□□□ -0.29
IFT140-202ENST00000397417 ZGPATQ8N5A5 531 aaKnown RBP13.24□□□□□ -0.29
IFT140-202ENST00000397417 DCAF5Q96JK2 942 aa13.24□□□□□ -0.29
IFT140-202ENST00000397417 AXIN2Q9Y2T1 843 aa13.24□□□□□ -0.29
IFT140-202ENST00000397417 SBNO1A3KN83 1393 aa13.24□□□□□ -0.29
IFT140-202ENST00000397417 RFC4P35249 363 aa13.23□□□□□ -0.29
IFT140-202ENST00000397417 STK38Q15208 465 aa13.23□□□□□ -0.29
IFT140-202ENST00000397417 TTLL7Q6ZT98 887 aa13.23□□□□□ -0.29
IFT140-202ENST00000397417 CCAR2Q8N163 923 aaKnown RBP13.23□□□□□ -0.29
IFT140-202ENST00000397417 TNPO1Q92973 898 aaKnown RBP13.23□□□□□ -0.29
IFT140-202ENST00000397417 SBNO2Q9Y2G9 1366 aa13.23□□□□□ -0.29
IFT140-202ENST00000397417 SYCE3A1L190 88 aa13.23□□□□□ -0.29
IFT140-202ENST00000397417 HIP1O00291 1037 aa13.23□□□□□ -0.29
IFT140-202ENST00000397417 SMC5Q8IY18 1101 aa13.23□□□□□ -0.29
IFT140-202ENST00000397417 AK7Q96M32 723 aa13.23□□□□□ -0.29
IFT140-202ENST00000397417 PTMSP20962 102 aa13.23□□□□□ -0.29
IFT140-202ENST00000397417 SASS6Q6UVJ0 657 aa13.23□□□□□ -0.29
IFT140-202ENST00000397417 PANK2Q9BZ23 570 aa13.23□□□□□ -0.29
IFT140-202ENST00000397417 NAPBQ9H115 298 aa13.23□□□□□ -0.29
IFT140-202ENST00000397417 SART3Q15020 963 aaKnown RBP13.23□□□□□ -0.29
IFT140-202ENST00000397417 MIGA1Q8NAN2 632 aa13.23□□□□□ -0.29
IFT140-202ENST00000397417 TAF5LO75529 589 aa13.22□□□□□ -0.29
IFT140-202ENST00000397417 RXRAP19793 462 aa13.22□□□□□ -0.29
IFT140-202ENST00000397417 MICU3Q86XE3 530 aa13.22□□□□□ -0.29
IFT140-202ENST00000397417 NOC3LQ8WTT2 800 aaKnown RBP13.22□□□□□ -0.29
IFT140-202ENST00000397417 ZNF622Q969S3 477 aaKnown RBP eCLIP13.22□□□□□ -0.29
IFT140-202ENST00000397417 DDX21Q9NR30 783 aaKnown RBP eCLIP13.22□□□□□ -0.29
IFT140-202ENST00000397417 RBM27Q9P2N5 1060 aaKnown RBP13.22□□□□□ -0.29
IFT140-202ENST00000397417 MADDQ8WXG6 1647 aa13.22□□□□□ -0.29
IFT140-202ENST00000397417 MLH3Q9UHC1 1453 aa13.22□□□□□ -0.29
IFT140-202ENST00000397417 KIAA0232Q92628 1395 aa13.22□□□□□ -0.29
IFT140-202ENST00000397417 EIF4A1P60842 406 aaKnown RBP13.22□□□□□ -0.29
IFT140-202ENST00000397417 BRF1Q92994 677 aa13.22□□□□□ -0.29
IFT140-202ENST00000397417 SUCLG2Q96I99 432 aa13.22□□□□□ -0.29
IFT140-202ENST00000397417 DBNDD2Q9BQY9 259 aa13.22□□□□□ -0.29
IFT140-202ENST00000397417 UBAC1Q9BSL1 405 aa13.22□□□□□ -0.29
IFT140-202ENST00000397417 NACAP1Q9BZK3 213 aa13.22□□□□□ -0.29
IFT140-202ENST00000397417 BRPF1P55201 1214 aaPredicted RBP13.21□□□□□ -0.29
IFT140-202ENST00000397417 CHAMP1Q96JM3 812 aa13.21□□□□□ -0.29
IFT140-202ENST00000397417 ASAP1Q9ULH1 1129 aa13.21□□□□□ -0.29
IFT140-202ENST00000397417 USP5P45974 858 aa13.21□□□□□ -0.29
IFT140-202ENST00000397417 ZNF652Q9Y2D9 606 aa13.21□□□□□ -0.29
IFT140-202ENST00000397417 CLTCL1P53675 1640 aa13.21□□□□□ -0.3
IFT140-202ENST00000397417 CCDC69A6NI79 296 aa13.21□□□□□ -0.3
IFT140-202ENST00000397417 ATP2B3Q16720 1220 aa13.2□□□□□ -0.3
IFT140-202ENST00000397417 IRS4O14654 1257 aaPredicted RBP13.2□□□□□ -0.3
IFT140-202ENST00000397417 NSFL1CQ9UNZ2 370 aaKnown RBP13.2□□□□□ -0.3
IFT140-202ENST00000397417 GNPATO15228 680 aa13.2□□□□□ -0.3
IFT140-202ENST00000397417 POLR3DP05423 398 aaPredicted RBP13.2□□□□□ -0.3
IFT140-202ENST00000397417 IMMTQ16891 758 aaKnown RBP13.2□□□□□ -0.3
IFT140-202ENST00000397417 ISM2Q6H9L7 571 aa13.2□□□□□ -0.3
IFT140-202ENST00000397417 USP44Q9H0E7 712 aa13.2□□□□□ -0.3
IFT140-202ENST00000397417 NMIQ13287 307 aaPredicted RBP13.19□□□□□ -0.3
IFT140-202ENST00000397417 CAVIN4Q5BKX8 364 aa13.19□□□□□ -0.3
IFT140-202ENST00000397417 TTLL5Q6EMB2 1281 aa13.19□□□□□ -0.3
IFT140-202ENST00000397417 SMIM5Q71RC9 77 aa13.19□□□□□ -0.3
IFT140-202ENST00000397417 PCMTD1Q96MG8 357 aaPredicted RBP13.19□□□□□ -0.3
IFT140-202ENST00000397417 SLC52A2Q9HAB3 445 aa13.19□□□□□ -0.3
IFT140-202ENST00000397417 CTDP1Q9Y5B0 961 aaPredicted RBP13.19□□□□□ -0.3
IFT140-202ENST00000397417 RBM8AQ9Y5S9 174 aaKnown RBP13.19□□□□□ -0.3
IFT140-202ENST00000397417 DZIP1Q86YF9 867 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms