RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 LY75O60449 1722 aa23.87■■□□□ 1.41
TSPAN4-204ENST00000397404 COL5A3P25940 1745 aaPredicted RBP23.87■■□□□ 1.41
TSPAN4-204ENST00000397404 PCDHB15Q9Y5E8 787 aa23.87■■□□□ 1.41
TSPAN4-204ENST00000397404 ERVV-1B6SEH8 477 aa23.86■■□□□ 1.41
TSPAN4-204ENST00000397404 SLC27A3Q5K4L6 730 aa23.86■■□□□ 1.41
TSPAN4-204ENST00000397404 A0A087WZG4 1122 aa23.85■■□□□ 1.41
TSPAN4-204ENST00000397404 HMMRO75330 724 aa23.85■■□□□ 1.41
TSPAN4-204ENST00000397404 UBTFL1P0CB47 393 aaPredicted RBP23.85■■□□□ 1.41
TSPAN4-204ENST00000397404 ARFGEF2Q9Y6D5 1785 aa23.84■■□□□ 1.41
TSPAN4-204ENST00000397404 RGS17Q9UGC6 210 aaPredicted RBP23.84■■□□□ 1.41
TSPAN4-204ENST00000397404 UTYO14607 1347 aa23.84■■□□□ 1.41
TSPAN4-204ENST00000397404 CRKLP46109 303 aaKnown RBP23.83■■□□□ 1.41
TSPAN4-204ENST00000397404 TRIM28Q13263 835 aaKnown RBP23.83■■□□□ 1.41
TSPAN4-204ENST00000397404 MEIS3Q99687 375 aa23.83■■□□□ 1.41
TSPAN4-204ENST00000397404 USP44Q9H0E7 712 aa23.83■■□□□ 1.41
TSPAN4-204ENST00000397404 NUP188Q5SRE5 1749 aa23.82■■□□□ 1.4
TSPAN4-204ENST00000397404 EIF5P55010 431 aaKnown RBP23.82■■□□□ 1.4
TSPAN4-204ENST00000397404 ANKRD44Q8N8A2 993 aa23.82■■□□□ 1.4
TSPAN4-204ENST00000397404 GCC1Q96CN9 775 aa23.82■■□□□ 1.4
TSPAN4-204ENST00000397404 C9orf78Q9NZ63 289 aaPredicted RBP23.82■■□□□ 1.4
TSPAN4-204ENST00000397404 MAP3K15Q6ZN16 1313 aa23.82■■□□□ 1.4
TSPAN4-204ENST00000397404 COL15A1P39059 1388 aa23.82■■□□□ 1.4
TSPAN4-204ENST00000397404 CCDC191Q8NCU4 936 aa23.81■■□□□ 1.4
TSPAN4-204ENST00000397404 CCNL1Q9UK58 526 aaPredicted RBP23.81■■□□□ 1.4
TSPAN4-204ENST00000397404 ZBTB1Q9Y2K1 713 aa23.81■■□□□ 1.4
TSPAN4-204ENST00000397404 ITPK1Q13572 414 aa23.81■■□□□ 1.4
TSPAN4-204ENST00000397404 INTS5Q6P9B9 1019 aaKnown RBP23.81■■□□□ 1.4
TSPAN4-204ENST00000397404 NEURL1BA8MQ27 555 aa23.8■■□□□ 1.4
TSPAN4-204ENST00000397404 GRM8O00222 908 aa23.8■■□□□ 1.4
TSPAN4-204ENST00000397404 PLSCR1O15162 318 aa23.79■■□□□ 1.4
TSPAN4-204ENST00000397404 FAM182BQ5T319 152 aa23.79■■□□□ 1.4
TSPAN4-204ENST00000397404 GIGYF2Q6Y7W6 1299 aaKnown RBP23.79■■□□□ 1.4
TSPAN4-204ENST00000397404 MYD88Q99836 296 aa23.79■■□□□ 1.4
TSPAN4-204ENST00000397404 GCKRQ14397 625 aa23.78■■□□□ 1.4
TSPAN4-204ENST00000397404 CEP85Q6P2H3 762 aa23.78■■□□□ 1.4
TSPAN4-204ENST00000397404 POTEAQ6S8J7 498 aa23.78■■□□□ 1.4
TSPAN4-204ENST00000397404 TTLL7Q6ZT98 887 aa23.78■■□□□ 1.4
TSPAN4-204ENST00000397404 IGKV5-2P06315 115 aa23.77■■□□□ 1.4
TSPAN4-204ENST00000397404 PIP4K2AP48426 406 aaPredicted RBP23.77■■□□□ 1.4
TSPAN4-204ENST00000397404 TCIRG1Q13488 830 aa23.77■■□□□ 1.4
TSPAN4-204ENST00000397404 SMC5Q8IY18 1101 aa23.77■■□□□ 1.4
TSPAN4-204ENST00000397404 IGHDP01880 384 aa23.76■■□□□ 1.39
TSPAN4-204ENST00000397404 DZIP3Q86Y13 1208 aaKnown RBP23.76■■□□□ 1.39
TSPAN4-204ENST00000397404 CWC25Q9NXE8 425 aaPredicted RBP23.76■■□□□ 1.39
TSPAN4-204ENST00000397404 ZNF652Q9Y2D9 606 aa23.76■■□□□ 1.39
TSPAN4-204ENST00000397404 RGPD3A6NKT7 1758 aaPredicted RBP23.76■■□□□ 1.39
TSPAN4-204ENST00000397404 RGPD4Q7Z3J3 1758 aa23.76■■□□□ 1.39
TSPAN4-204ENST00000397404 CLEC4GQ6UXB4 293 aa23.75■■□□□ 1.39
TSPAN4-204ENST00000397404 TAF1LQ8IZX4 1826 aa23.75■■□□□ 1.39
TSPAN4-204ENST00000397404 RPS6KA4O75676 772 aa23.75■■□□□ 1.39
TSPAN4-204ENST00000397404 ADRA2BP18089 450 aa23.75■■□□□ 1.39
TSPAN4-204ENST00000397404 MTX1Q13505 466 aa23.75■■□□□ 1.39
TSPAN4-204ENST00000397404 LINC00116Q8NCU8 138 aa23.75■■□□□ 1.39
TSPAN4-204ENST00000397404 ISCA1Q9BUE6 129 aa23.75■■□□□ 1.39
TSPAN4-204ENST00000397404 TRIM37O94972 964 aa23.74■■□□□ 1.39
TSPAN4-204ENST00000397404 ATP8B2P98198 1209 aa23.74■■□□□ 1.39
TSPAN4-204ENST00000397404 CWF19L2Q2TBE0 894 aaKnown RBP23.74■■□□□ 1.39
TSPAN4-204ENST00000397404 ZNF330Q9Y3S2 320 aaPredicted RBP23.74■■□□□ 1.39
TSPAN4-204ENST00000397404 AFDNP55196 1824 aaKnown RBP23.73■■□□□ 1.39
TSPAN4-204ENST00000397404 MYH14Q7Z406 1995 aaKnown RBP23.73■■□□□ 1.39
TSPAN4-204ENST00000397404 PTF1AQ7RTS3 328 aa23.73■■□□□ 1.39
TSPAN4-204ENST00000397404 ZBTB3Q9H5J0 574 aa23.73■■□□□ 1.39
TSPAN4-204ENST00000397404 HSP90B1P14625 803 aaKnown RBP23.72■■□□□ 1.39
TSPAN4-204ENST00000397404 DCTPP1Q9H773 170 aa23.72■■□□□ 1.39
TSPAN4-204ENST00000397404 C1orf115Q9H7X2 142 aa23.72■■□□□ 1.39
TSPAN4-204ENST00000397404 RTCBQ9Y3I0 505 aaKnown RBP23.72■■□□□ 1.39
TSPAN4-204ENST00000397404 LRRFIP2Q9Y608 721 aaKnown RBP23.72■■□□□ 1.39
TSPAN4-204ENST00000397404 ANKRD36CQ5JPF3 1778 aa23.71■■□□□ 1.39
TSPAN4-204ENST00000397404 NBPF7P0C2Y1 421 aaPredicted RBP23.71■■□□□ 1.39
TSPAN4-204ENST00000397404 C4BP0C0L5 1744 aa23.7■■□□□ 1.39
TSPAN4-204ENST00000397404 PARP10Q53GL7 1025 aa23.7■■□□□ 1.38
TSPAN4-204ENST00000397404 H7C1W4 665 aa23.69■■□□□ 1.38
TSPAN4-204ENST00000397404 HSP90AB4PQ58FF6 505 aa23.69■■□□□ 1.38
TSPAN4-204ENST00000397404 SIRT2Q8IXJ6 389 aa23.69■■□□□ 1.38
TSPAN4-204ENST00000397404 SSH3Q8TE77 659 aa23.69■■□□□ 1.38
TSPAN4-204ENST00000397404 ZBTB47Q9UFB7 747 aaPredicted RBP23.68■■□□□ 1.38
TSPAN4-204ENST00000397404 AK7Q96M32 723 aa23.68■■□□□ 1.38
TSPAN4-204ENST00000397404 ARXQ96QS3 562 aa23.68■■□□□ 1.38
TSPAN4-204ENST00000397404 NUP98P52948 1817 aa23.67■■□□□ 1.38
TSPAN4-204ENST00000397404 BCORQ6W2J9 1755 aa23.67■■□□□ 1.38
TSPAN4-204ENST00000397404 CAMTA2O94983 1202 aa23.67■■□□□ 1.38
TSPAN4-204ENST00000397404 PCCAP05165 728 aaPredicted RBP23.67■■□□□ 1.38
TSPAN4-204ENST00000397404 ZBTB38Q8NAP3 1195 aaPredicted RBP23.67■■□□□ 1.38
TSPAN4-204ENST00000397404 ATP5J2-PTCD1G3V325 749 aa23.66■■□□□ 1.38
TSPAN4-204ENST00000397404 POLA2Q14181 598 aa23.66■■□□□ 1.38
TSPAN4-204ENST00000397404 ZNF34Q8IZ26 560 aa23.66■■□□□ 1.38
TSPAN4-204ENST00000397404 NARFQ9UHQ1 456 aa23.66■■□□□ 1.38
TSPAN4-204ENST00000397404 CDHR2Q9BYE9 1310 aa23.66■■□□□ 1.38
TSPAN4-204ENST00000397404 GNPATO15228 680 aa23.65■■□□□ 1.38
TSPAN4-204ENST00000397404 APBA3O96018 575 aa23.65■■□□□ 1.38
TSPAN4-204ENST00000397404 SSFA2P28290 1259 aa23.65■■□□□ 1.38
TSPAN4-204ENST00000397404 NUCB1Q02818 461 aa23.65■■□□□ 1.38
TSPAN4-204ENST00000397404 TXNRD1Q16881 649 aa23.65■■□□□ 1.38
TSPAN4-204ENST00000397404 TBC1D2BQ9UPU7 963 aa23.65■■□□□ 1.38
TSPAN4-204ENST00000397404 RAB11FIP3O75154 756 aa23.64■■□□□ 1.38
TSPAN4-204ENST00000397404 RABL6Q3YEC7 729 aaPredicted RBP23.64■■□□□ 1.38
TSPAN4-204ENST00000397404 PLA2G12BQ9BX93 195 aa23.64■■□□□ 1.38
TSPAN4-204ENST00000397404 SCN7AQ01118 1682 aa23.64■■□□□ 1.38
TSPAN4-204ENST00000397404 TNS1Q9HBL0 1735 aaKnown RBP23.64■■□□□ 1.37
TSPAN4-204ENST00000397404 SRGAP3O43295 1099 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms