RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 AK7Q96M32 723 aa29.82■■■□□ 2.36
TSPAN4-202ENST00000397396 CRBNQ96SW2 442 aa29.82■■■□□ 2.36
TSPAN4-202ENST00000397396 COG6Q9Y2V7 657 aa29.82■■■□□ 2.36
TSPAN4-202ENST00000397396 N4BP2Q86UW6 1770 aaPredicted RBP29.82■■■□□ 2.36
TSPAN4-202ENST00000397396 NEXNQ0ZGT2 675 aa29.81■■■□□ 2.36
TSPAN4-202ENST00000397396 SLC4A10Q6U841 1118 aa29.81■■■□□ 2.36
TSPAN4-202ENST00000397396 LRRC4BQ9NT99 713 aa29.81■■■□□ 2.36
TSPAN4-202ENST00000397396 MAP3K2Q9Y2U5 619 aa29.81■■■□□ 2.36
TSPAN4-202ENST00000397396 F6X3S4 739 aa29.8■■■□□ 2.36
TSPAN4-202ENST00000397396 RPS6KA4O75676 772 aa29.8■■■□□ 2.36
TSPAN4-202ENST00000397396 COL15A1P39059 1388 aa29.79■■■□□ 2.36
TSPAN4-202ENST00000397396 MYH14Q7Z406 1995 aaKnown RBP29.79■■■□□ 2.36
TSPAN4-202ENST00000397396 KCNQ4P56696 695 aa29.79■■■□□ 2.36
TSPAN4-202ENST00000397396 RTCBQ9Y3I0 505 aaKnown RBP29.79■■■□□ 2.36
TSPAN4-202ENST00000397396 EP400Q96L91 3159 aa29.79■■■□□ 2.36
TSPAN4-202ENST00000397396 MAP3K15Q6ZN16 1313 aa29.78■■■□□ 2.36
TSPAN4-202ENST00000397396 IBTKQ9P2D0 1353 aaPredicted RBP29.78■■■□□ 2.36
TSPAN4-202ENST00000397396 GNPATO15228 680 aa29.77■■■□□ 2.36
TSPAN4-202ENST00000397396 TTLL7Q6ZT98 887 aa29.77■■■□□ 2.36
TSPAN4-202ENST00000397396 DZIP3Q86Y13 1208 aaKnown RBP29.77■■■□□ 2.36
TSPAN4-202ENST00000397396 METTL22Q9BUU2 404 aaPredicted RBP29.77■■■□□ 2.36
TSPAN4-202ENST00000397396 SRCIN1Q9C0H9 1055 aa29.77■■■□□ 2.36
TSPAN4-202ENST00000397396 ARFGEF2Q9Y6D5 1785 aa29.76■■■□□ 2.36
TSPAN4-202ENST00000397396 ERVV-1B6SEH8 477 aa29.76■■■□□ 2.36
TSPAN4-202ENST00000397396 RGL2O15211 777 aa29.76■■■□□ 2.36
TSPAN4-202ENST00000397396 ADRA2BP18089 450 aa29.76■■■□□ 2.36
TSPAN4-202ENST00000397396 GTF3C3Q9Y5Q9 886 aa29.76■■■□□ 2.36
TSPAN4-202ENST00000397396 ALDH1L1O75891 902 aa29.75■■■□□ 2.35
TSPAN4-202ENST00000397396 HSP90AB3PQ58FF7 597 aa29.75■■■□□ 2.35
TSPAN4-202ENST00000397396 PROM2Q8N271 834 aa29.75■■■□□ 2.35
TSPAN4-202ENST00000397396 LINS1Q8NG48 757 aa29.75■■■□□ 2.35
TSPAN4-202ENST00000397396 EXOC6Q8TAG9 804 aa29.75■■■□□ 2.35
TSPAN4-202ENST00000397396 NUP188Q5SRE5 1749 aa29.75■■■□□ 2.35
TSPAN4-202ENST00000397396 BEND3Q5T5X7 828 aa29.74■■■□□ 2.35
TSPAN4-202ENST00000397396 CAMKK2Q96RR4 588 aa29.74■■■□□ 2.35
TSPAN4-202ENST00000397396 ARXQ96QS3 562 aa29.73■■■□□ 2.35
TSPAN4-202ENST00000397396 ZBTB3Q9H5J0 574 aa29.72■■■□□ 2.35
TSPAN4-202ENST00000397396 SSFA2P28290 1259 aa29.71■■■□□ 2.35
TSPAN4-202ENST00000397396 ZNF652Q9Y2D9 606 aa29.71■■■□□ 2.35
TSPAN4-202ENST00000397396 EN1Q05925 392 aaPredicted RBP29.71■■■□□ 2.35
TSPAN4-202ENST00000397396 GIGYF2Q6Y7W6 1299 aaKnown RBP29.71■■■□□ 2.35
TSPAN4-202ENST00000397396 MYD88Q99836 296 aa29.71■■■□□ 2.35
TSPAN4-202ENST00000397396 GNAI3P08754 354 aa29.69■■■□□ 2.34
TSPAN4-202ENST00000397396 EZH2Q15910 746 aaKnown RBP29.69■■■□□ 2.34
TSPAN4-202ENST00000397396 TRAPPC3LQ5T215 181 aa29.69■■■□□ 2.34
TSPAN4-202ENST00000397396 TBC1D2BQ9UPU7 963 aa29.69■■■□□ 2.34
TSPAN4-202ENST00000397396 HDAC5Q9UQL6 1122 aa29.69■■■□□ 2.34
TSPAN4-202ENST00000397396 ZBTB7BO15156 539 aaPredicted RBP29.68■■■□□ 2.34
TSPAN4-202ENST00000397396 FLAD1Q8NFF5 587 aa29.68■■■□□ 2.34
TSPAN4-202ENST00000397396 UBR3Q6ZT12 1888 aa29.67■■■□□ 2.34
TSPAN4-202ENST00000397396 BCORQ6W2J9 1755 aa29.67■■■□□ 2.34
TSPAN4-202ENST00000397396 CAMTA2O94983 1202 aa29.67■■■□□ 2.34
TSPAN4-202ENST00000397396 TCIRG1Q13488 830 aa29.67■■■□□ 2.34
TSPAN4-202ENST00000397396 CLEC4GQ6UXB4 293 aa29.67■■■□□ 2.34
TSPAN4-202ENST00000397396 SCN7AQ01118 1682 aa29.67■■■□□ 2.34
TSPAN4-202ENST00000397396 ZPR1O75312 459 aa29.66■■■□□ 2.34
TSPAN4-202ENST00000397396 TRIM28Q13263 835 aaKnown RBP29.66■■■□□ 2.34
TSPAN4-202ENST00000397396 AKT1S1Q96B36 256 aa29.66■■■□□ 2.34
TSPAN4-202ENST00000397396 NARFQ9UHQ1 456 aa29.66■■■□□ 2.34
TSPAN4-202ENST00000397396 NEURL1BA8MQ27 555 aa29.65■■■□□ 2.34
TSPAN4-202ENST00000397396 RFC4P35249 363 aa29.65■■■□□ 2.34
TSPAN4-202ENST00000397396 CCDC191Q8NCU4 936 aa29.65■■■□□ 2.34
TSPAN4-202ENST00000397396 ZBTB40Q9NUA8 1239 aa29.65■■■□□ 2.34
TSPAN4-202ENST00000397396 PPP4R2Q9NY27 417 aa29.65■■■□□ 2.34
TSPAN4-202ENST00000397396 IGKV5-2P06315 115 aa29.64■■■□□ 2.34
TSPAN4-202ENST00000397396 TFCP2L1Q9NZI6 479 aa29.64■■■□□ 2.34
TSPAN4-202ENST00000397396 ANKRD36CQ5JPF3 1778 aa29.63■■■□□ 2.33
TSPAN4-202ENST00000397396 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.63■■■□□ 2.33
TSPAN4-202ENST00000397396 ARHGEF1Q92888 912 aaKnown RBP29.63■■■□□ 2.33
TSPAN4-202ENST00000397396 ISCA1Q9BUE6 129 aa29.63■■■□□ 2.33
TSPAN4-202ENST00000397396 CWC25Q9NXE8 425 aaPredicted RBP29.63■■■□□ 2.33
TSPAN4-202ENST00000397396 PHF14O94880 888 aa29.62■■■□□ 2.33
TSPAN4-202ENST00000397396 CWF19L2Q2TBE0 894 aaKnown RBP29.62■■■□□ 2.33
TSPAN4-202ENST00000397396 STK32BQ9NY57 414 aa29.62■■■□□ 2.33
TSPAN4-202ENST00000397396 C9orf78Q9NZ63 289 aaPredicted RBP29.62■■■□□ 2.33
TSPAN4-202ENST00000397396 C4AP0C0L4 1744 aa29.61■■■□□ 2.33
TSPAN4-202ENST00000397396 UBTFL1P0CB47 393 aaPredicted RBP29.61■■■□□ 2.33
TSPAN4-202ENST00000397396 GCKRQ14397 625 aa29.61■■■□□ 2.33
TSPAN4-202ENST00000397396 HLFQ16534 295 aa29.61■■■□□ 2.33
TSPAN4-202ENST00000397396 DEFB132Q7Z7B7 95 aa29.61■■■□□ 2.33
TSPAN4-202ENST00000397396 AFDNP55196 1824 aaKnown RBP29.61■■■□□ 2.33
TSPAN4-202ENST00000397396 USP42Q9H9J4 1324 aaKnown RBP29.6■■■□□ 2.33
TSPAN4-202ENST00000397396 NUP98P52948 1817 aa29.6■■■□□ 2.33
TSPAN4-202ENST00000397396 GRM8O00222 908 aa29.6■■■□□ 2.33
TSPAN4-202ENST00000397396 PARP10Q53GL7 1025 aa29.6■■■□□ 2.33
TSPAN4-202ENST00000397396 MEIS3Q99687 375 aa29.6■■■□□ 2.33
TSPAN4-202ENST00000397396 ATP5J2-PTCD1G3V325 749 aa29.59■■■□□ 2.33
TSPAN4-202ENST00000397396 ZNF827Q17R98 1081 aa29.59■■■□□ 2.33
TSPAN4-202ENST00000397396 USP44Q9H0E7 712 aa29.59■■■□□ 2.33
TSPAN4-202ENST00000397396 UTYO14607 1347 aa29.58■■■□□ 2.33
TSPAN4-202ENST00000397396 SOCS7O14512 581 aa29.58■■■□□ 2.33
TSPAN4-202ENST00000397396 GNAI2P04899 355 aa29.58■■■□□ 2.33
TSPAN4-202ENST00000397396 ZNF34Q8IZ26 560 aa29.57■■■□□ 2.32
TSPAN4-202ENST00000397396 UPF1Q92900 1129 aaKnown RBP eCLIP29.57■■■□□ 2.322e-9■■■■■ 55.1
TSPAN4-202ENST00000397396 SLC15A2Q16348 729 aa29.56■■■□□ 2.32
TSPAN4-202ENST00000397396 USPL1Q5W0Q7 1092 aa29.56■■■□□ 2.32
TSPAN4-202ENST00000397396 QSER1Q2KHR3 1735 aa29.55■■■□□ 2.32
TSPAN4-202ENST00000397396 AMIGO3Q86WK7 504 aa29.55■■■□□ 2.32
TSPAN4-202ENST00000397396 NLRP10Q86W26 655 aa29.54■■■□□ 2.32
TSPAN4-202ENST00000397396 CCDC136Q96JN2 1154 aa29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms