RNA–Protein interactions for RNA: ENST00000397386.7

LMCD1-202, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-202ENST00000397386 ZBTB1Q9Y2K1 713 aa15.98■□□□□ 0.15
LMCD1-202ENST00000397386 PLSCR1O15162 318 aa15.97■□□□□ 0.15
LMCD1-202ENST00000397386 EIF5P55010 431 aaKnown RBP15.97■□□□□ 0.15
LMCD1-202ENST00000397386 NPM2Q86SE8 214 aaKnown RBP15.97■□□□□ 0.15
LMCD1-202ENST00000397386 GNAI3P08754 354 aa15.96■□□□□ 0.15
LMCD1-202ENST00000397386 LINC00116Q8NCU8 138 aa15.96■□□□□ 0.15
LMCD1-202ENST00000397386 B4GALNT3Q6L9W6 998 aa15.95■□□□□ 0.14
LMCD1-202ENST00000397386 KIF6Q6ZMV9 814 aa15.95■□□□□ 0.14
LMCD1-202ENST00000397386 TTLL7Q6ZT98 887 aa15.95■□□□□ 0.14
LMCD1-202ENST00000397386 MYH14Q7Z406 1995 aaKnown RBP15.95■□□□□ 0.14
LMCD1-202ENST00000397386 ARFGEF2Q9Y6D5 1785 aa15.94■□□□□ 0.14
LMCD1-202ENST00000397386 ERVV-1B6SEH8 477 aa15.94■□□□□ 0.14
LMCD1-202ENST00000397386 RGL2O15211 777 aa15.94■□□□□ 0.14
LMCD1-202ENST00000397386 USP44Q9H0E7 712 aa15.94■□□□□ 0.14
LMCD1-202ENST00000397386 HDAC5Q9UQL6 1122 aa15.94■□□□□ 0.14
LMCD1-202ENST00000397386 MAP3K15Q6ZN16 1313 aa15.94■□□□□ 0.14
LMCD1-202ENST00000397386 NUP188Q5SRE5 1749 aa15.94■□□□□ 0.14
LMCD1-202ENST00000397386 MEIS3Q99687 375 aa15.94■□□□□ 0.14
LMCD1-202ENST00000397386 PCDHB15Q9Y5E8 787 aa15.94■□□□□ 0.14
LMCD1-202ENST00000397386 TAF1LQ8IZX4 1826 aa15.93■□□□□ 0.14
LMCD1-202ENST00000397386 A0A087WZG4 1122 aa15.93■□□□□ 0.14
LMCD1-202ENST00000397386 UTYO14607 1347 aa15.92■□□□□ 0.14
LMCD1-202ENST00000397386 RGPD3A6NKT7 1758 aaPredicted RBP15.92■□□□□ 0.14
LMCD1-202ENST00000397386 RGPD4Q7Z3J3 1758 aa15.92■□□□□ 0.14
LMCD1-202ENST00000397386 NEURL1BA8MQ27 555 aa15.92■□□□□ 0.14
LMCD1-202ENST00000397386 RPS6KA4O75676 772 aa15.92■□□□□ 0.14
LMCD1-202ENST00000397386 IGKV5-2P06315 115 aa15.92■□□□□ 0.14
LMCD1-202ENST00000397386 TRIM28Q13263 835 aaKnown RBP15.92■□□□□ 0.14
LMCD1-202ENST00000397386 HDAC1Q13547 482 aaPredicted RBP15.92■□□□□ 0.14
LMCD1-202ENST00000397386 HSP90AB3PQ58FF7 597 aa15.92■□□□□ 0.14
LMCD1-202ENST00000397386 GIGYF2Q6Y7W6 1299 aaKnown RBP15.92■□□□□ 0.14
LMCD1-202ENST00000397386 DZIP3Q86Y13 1208 aaKnown RBP15.92■□□□□ 0.14
LMCD1-202ENST00000397386 MYD88Q99836 296 aa15.92■□□□□ 0.14
LMCD1-202ENST00000397386 RWDD1Q9H446 243 aaPredicted RBP15.92■□□□□ 0.14
LMCD1-202ENST00000397386 ZNF330Q9Y3S2 320 aaPredicted RBP15.92■□□□□ 0.14
LMCD1-202ENST00000397386 APBA3O96018 575 aa15.91■□□□□ 0.14
LMCD1-202ENST00000397386 GNAI2P04899 355 aa15.91■□□□□ 0.14
LMCD1-202ENST00000397386 UBTFL1P0CB47 393 aaPredicted RBP15.91■□□□□ 0.14
LMCD1-202ENST00000397386 TCIRG1Q13488 830 aa15.91■□□□□ 0.14
LMCD1-202ENST00000397386 CENPQQ7L2Z9 268 aaPredicted RBP15.91■□□□□ 0.14
LMCD1-202ENST00000397386 RPAP2Q8IXW5 612 aaPredicted RBP15.91■□□□□ 0.14
LMCD1-202ENST00000397386 ZBTB3Q9H5J0 574 aa15.91■□□□□ 0.14
LMCD1-202ENST00000397386 LRRC4BQ9NT99 713 aa15.91■□□□□ 0.14
LMCD1-202ENST00000397386 COL15A1P39059 1388 aa15.91■□□□□ 0.14
LMCD1-202ENST00000397386 KDM2BQ8NHM5 1336 aa15.91■□□□□ 0.14
LMCD1-202ENST00000397386 KCNQ4P56696 695 aa15.9■□□□□ 0.14
LMCD1-202ENST00000397386 GCKRQ14397 625 aa15.9■□□□□ 0.14
LMCD1-202ENST00000397386 TXNRD1Q16881 649 aa15.9■□□□□ 0.14
LMCD1-202ENST00000397386 CWF19L2Q2TBE0 894 aaKnown RBP15.9■□□□□ 0.14
LMCD1-202ENST00000397386 CCDC191Q8NCU4 936 aa15.9■□□□□ 0.14
LMCD1-202ENST00000397386 C4BP0C0L5 1744 aa15.9■□□□□ 0.14
LMCD1-202ENST00000397386 TNS1Q9HBL0 1735 aaKnown RBP15.9■□□□□ 0.14
LMCD1-202ENST00000397386 EP400Q96L91 3159 aa15.9■□□□□ 0.14
LMCD1-202ENST00000397386 GRM8O00222 908 aa15.89■□□□□ 0.13
LMCD1-202ENST00000397386 ISCA1Q9BUE6 129 aa15.89■□□□□ 0.13
LMCD1-202ENST00000397386 C9orf78Q9NZ63 289 aaPredicted RBP15.89■□□□□ 0.13
LMCD1-202ENST00000397386 ADRA2BP18089 450 aa15.89■□□□□ 0.13
LMCD1-202ENST00000397386 PROM2Q8N271 834 aa15.89■□□□□ 0.13
LMCD1-202ENST00000397386 RTCBQ9Y3I0 505 aaKnown RBP15.89■□□□□ 0.13
LMCD1-202ENST00000397386 GNPATO15228 680 aa15.88■□□□□ 0.13
LMCD1-202ENST00000397386 CAMTA2O94983 1202 aa15.88■□□□□ 0.13
LMCD1-202ENST00000397386 NBPF7P0C2Y1 421 aaPredicted RBP15.88■□□□□ 0.13
LMCD1-202ENST00000397386 CLEC4GQ6UXB4 293 aa15.88■□□□□ 0.13
LMCD1-202ENST00000397386 ANKRD44Q8N8A2 993 aa15.88■□□□□ 0.13
LMCD1-202ENST00000397386 CWC25Q9NXE8 425 aaPredicted RBP15.88■□□□□ 0.13
LMCD1-202ENST00000397386 TBC1D2BQ9UPU7 963 aa15.88■□□□□ 0.13
LMCD1-202ENST00000397386 IGHDP01880 384 aa15.87■□□□□ 0.13
LMCD1-202ENST00000397386 CEP85Q6P2H3 762 aa15.87■□□□□ 0.13
LMCD1-202ENST00000397386 AK7Q96M32 723 aa15.87■□□□□ 0.13
LMCD1-202ENST00000397386 ARXQ96QS3 562 aa15.87■□□□□ 0.13
LMCD1-202ENST00000397386 C1orf115Q9H7X2 142 aa15.87■□□□□ 0.13
LMCD1-202ENST00000397386 ZNF652Q9Y2D9 606 aa15.87■□□□□ 0.13
LMCD1-202ENST00000397386 ATP5J2-PTCD1G3V325 749 aa15.86■□□□□ 0.13
LMCD1-202ENST00000397386 HLFQ16534 295 aa15.86■□□□□ 0.13
LMCD1-202ENST00000397386 ILDR2Q71H61 639 aa15.86■□□□□ 0.13
LMCD1-202ENST00000397386 NUP98P52948 1817 aa15.85■□□□□ 0.13
LMCD1-202ENST00000397386 H7C1W4 665 aa15.85■□□□□ 0.13
LMCD1-202ENST00000397386 HMMRO75330 724 aa15.85■□□□□ 0.13
LMCD1-202ENST00000397386 SIRT2Q8IXJ6 389 aa15.85■□□□□ 0.13
LMCD1-202ENST00000397386 ZNF34Q8IZ26 560 aa15.85■□□□□ 0.13
LMCD1-202ENST00000397386 NARFQ9UHQ1 456 aa15.85■□□□□ 0.13
LMCD1-202ENST00000397386 LRRFIP2Q9Y608 721 aaKnown RBP15.85■□□□□ 0.13
LMCD1-202ENST00000397386 ANKRD36CQ5JPF3 1778 aa15.85■□□□□ 0.13
LMCD1-202ENST00000397386 AFDNP55196 1824 aaKnown RBP15.85■□□□□ 0.13
LMCD1-202ENST00000397386 SSFA2P28290 1259 aa15.84■□□□□ 0.13
LMCD1-202ENST00000397386 ATP8B2P98198 1209 aa15.84■□□□□ 0.13
LMCD1-202ENST00000397386 MTX1Q13505 466 aa15.84■□□□□ 0.13
LMCD1-202ENST00000397386 CCDC125Q86Z20 511 aa15.84■□□□□ 0.13
LMCD1-202ENST00000397386 BCORQ6W2J9 1755 aa15.84■□□□□ 0.13
LMCD1-202ENST00000397386 CASP7P55210 303 aa15.84■□□□□ 0.13
LMCD1-202ENST00000397386 TRAPPC3LQ5T215 181 aa15.84■□□□□ 0.13
LMCD1-202ENST00000397386 SMC5Q8IY18 1101 aa15.84■□□□□ 0.13
LMCD1-202ENST00000397386 GCC1Q96CN9 775 aa15.84■□□□□ 0.13
LMCD1-202ENST00000397386 UBR3Q6ZT12 1888 aa15.83■□□□□ 0.12
LMCD1-202ENST00000397386 SF3B2Q13435 895 aaKnown RBP15.83■□□□□ 0.12
LMCD1-202ENST00000397386 PARP10Q53GL7 1025 aa15.83■□□□□ 0.12
LMCD1-202ENST00000397386 NLRP10Q86W26 655 aa15.83■□□□□ 0.12
LMCD1-202ENST00000397386 CAMKK2Q96RR4 588 aa15.83■□□□□ 0.12
LMCD1-202ENST00000397386 SCN7AQ01118 1682 aa15.82■□□□□ 0.12
LMCD1-202ENST00000397386 ZPR1O75312 459 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms