RNA–Protein interactions for RNA: ENST00000397381.4

UCA1-201, Transcript of urothelial cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene UCA1, Length 2,299 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCA1-201ENST00000397381 SURF6O75683 361 aaKnown RBP11.11□□□□□ -0.63
UCA1-201ENST00000397381 CASTP20810 708 aaKnown RBP11.11□□□□□ -0.63
UCA1-201ENST00000397381 HSP90AB4PQ58FF6 505 aa11.11□□□□□ -0.63
UCA1-201ENST00000397381 PDRG1Q9NUG6 133 aa11.11□□□□□ -0.63
UCA1-201ENST00000397381 AGLP35573 1532 aa11.11□□□□□ -0.63
UCA1-201ENST00000397381 RIMS1Q86UR5 1692 aaKnown RBP11.1□□□□□ -0.63
UCA1-201ENST00000397381 TTC41PQ6P2S7 1318 aa11.1□□□□□ -0.63
UCA1-201ENST00000397381 SMTNL1A8MU46 457 aa11.1□□□□□ -0.63
UCA1-201ENST00000397381 KRT85P78386 507 aa11.1□□□□□ -0.63
UCA1-201ENST00000397381 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.1□□□□□ -0.63
UCA1-201ENST00000397381 CCDC83Q8IWF9 413 aa11.1□□□□□ -0.63
UCA1-201ENST00000397381 SPC24Q8NBT2 197 aa11.1□□□□□ -0.63
UCA1-201ENST00000397381 NUP62CLQ9H1M0 184 aa11.1□□□□□ -0.63
UCA1-201ENST00000397381 ZSWIM6Q9HCJ5 1215 aa11.1□□□□□ -0.63
UCA1-201ENST00000397381 USP6P35125 1406 aa11.1□□□□□ -0.63
UCA1-201ENST00000397381 FAM177BA6PVY3 158 aa11.1□□□□□ -0.63
UCA1-201ENST00000397381 PPP1R42Q7Z4L9 355 aa11.1□□□□□ -0.63
UCA1-201ENST00000397381 CYP46A1Q9Y6A2 500 aa11.1□□□□□ -0.63
UCA1-201ENST00000397381 SBNO1A3KN83 1393 aa11.1□□□□□ -0.63
UCA1-201ENST00000397381 ACEP12821 1306 aa11.09□□□□□ -0.63
UCA1-201ENST00000397381 GLRX3O76003 335 aaKnown RBP11.09□□□□□ -0.63
UCA1-201ENST00000397381 LARGE1O95461 756 aa11.09□□□□□ -0.63
UCA1-201ENST00000397381 MAP4K4O95819 1239 aaPredicted RBP11.09□□□□□ -0.63
UCA1-201ENST00000397381 PDCP20941 246 aa11.09□□□□□ -0.63
UCA1-201ENST00000397381 TYRO3Q06418 890 aa11.09□□□□□ -0.63
UCA1-201ENST00000397381 TPRNQ4KMQ1 711 aa11.09□□□□□ -0.63
UCA1-201ENST00000397381 OGFRQ9NZT2 677 aa11.09□□□□□ -0.63
UCA1-201ENST00000397381 FLT4P35916 1363 aa11.09□□□□□ -0.63
UCA1-201ENST00000397381 IGSF1Q8N6C5 1336 aa11.09□□□□□ -0.63
UCA1-201ENST00000397381 VPS37CA5D8V6 355 aaPredicted RBP11.09□□□□□ -0.63
UCA1-201ENST00000397381 PTGS1P23219 599 aa11.09□□□□□ -0.63
UCA1-201ENST00000397381 JAKMIP1Q96N16 626 aaKnown RBP11.09□□□□□ -0.63
UCA1-201ENST00000397381 MRVI1Q9Y6F6 885 aa11.09□□□□□ -0.63
UCA1-201ENST00000397381 ADGRL3Q9HAR2 1447 aa11.08□□□□□ -0.64
UCA1-201ENST00000397381 HDGFP51858 240 aaKnown RBP11.08□□□□□ -0.64
UCA1-201ENST00000397381 CWC27Q6UX04 472 aaKnown RBP11.08□□□□□ -0.64
UCA1-201ENST00000397381 DDX19AQ9NUU7 478 aaKnown RBP11.08□□□□□ -0.64
UCA1-201ENST00000397381 PAXBP1Q9Y5B6 917 aa11.08□□□□□ -0.64
UCA1-201ENST00000397381 TTC21AQ8NDW8 1320 aa11.08□□□□□ -0.64
UCA1-201ENST00000397381 GNAT3A8MTJ3 354 aa11.07□□□□□ -0.64
UCA1-201ENST00000397381 U2AF2P26368 475 aaKnown RBP eCLIP11.07□□□□□ -0.64
UCA1-201ENST00000397381 LARP6Q9BRS8 491 aaKnown RBP11.07□□□□□ -0.64
UCA1-201ENST00000397381 CGNQ9P2M7 1197 aaKnown RBP11.07□□□□□ -0.64
UCA1-201ENST00000397381 SPG7Q9UQ90 795 aa11.07□□□□□ -0.64
UCA1-201ENST00000397381 CAVIN2O95810 425 aa11.07□□□□□ -0.64
UCA1-201ENST00000397381 ZKSCAN1P17029 563 aaPredicted RBP11.07□□□□□ -0.64
UCA1-201ENST00000397381 ZNF75DP51815 510 aa11.07□□□□□ -0.64
UCA1-201ENST00000397381 NCBP1Q09161 790 aaKnown RBP11.07□□□□□ -0.64
UCA1-201ENST00000397381 TAF3Q5VWG9 929 aa11.07□□□□□ -0.64
UCA1-201ENST00000397381 RBM43Q6ZSC3 357 aaKnown RBP11.07□□□□□ -0.64
UCA1-201ENST00000397381 TTC6Q86TZ1 520 aa11.07□□□□□ -0.64
UCA1-201ENST00000397381 PLA2G4DQ86XP0 818 aa11.07□□□□□ -0.64
UCA1-201ENST00000397381 TDRD7Q8NHU6 1098 aaKnown RBP11.07□□□□□ -0.64
UCA1-201ENST00000397381 SCAND2PQ9GZW5 306 aaPredicted RBP11.07□□□□□ -0.64
UCA1-201ENST00000397381 TNMDQ9H2S6 317 aa11.07□□□□□ -0.64
UCA1-201ENST00000397381 CEP170BQ9Y4F5 1589 aaPredicted RBP11.07□□□□□ -0.64
UCA1-201ENST00000397381 SPDYE4A6NLX3 237 aa11.06□□□□□ -0.64
UCA1-201ENST00000397381 SRGAP3O43295 1099 aa11.06□□□□□ -0.64
UCA1-201ENST00000397381 CPA1P15085 419 aa11.06□□□□□ -0.64
UCA1-201ENST00000397381 GABPB1Q06547 395 aaPredicted RBP11.06□□□□□ -0.64
UCA1-201ENST00000397381 LARP1BQ659C4 914 aaKnown RBP11.06□□□□□ -0.64
UCA1-201ENST00000397381 CCDC186Q7Z3E2 898 aa11.06□□□□□ -0.64
UCA1-201ENST00000397381 GPATCH3Q96I76 525 aa11.06□□□□□ -0.64
UCA1-201ENST00000397381 CHMP4AQ9BY43 222 aa11.06□□□□□ -0.64
UCA1-201ENST00000397381 CBX8Q9HC52 389 aa11.06□□□□□ -0.64
UCA1-201ENST00000397381 CDC25BP30305 580 aa11.06□□□□□ -0.64
UCA1-201ENST00000397381 TAF7Q15545 349 aaPredicted RBP11.06□□□□□ -0.64
UCA1-201ENST00000397381 PRPF40BQ6NWY9 871 aaKnown RBP11.06□□□□□ -0.64
UCA1-201ENST00000397381 DRC7Q8IY82 874 aa11.06□□□□□ -0.64
UCA1-201ENST00000397381 EYA1Q99502 592 aa11.06□□□□□ -0.64
UCA1-201ENST00000397381 CLSTN2Q9H4D0 955 aa11.06□□□□□ -0.64
UCA1-201ENST00000397381 NPHP3Q7Z494 1330 aa11.06□□□□□ -0.64
UCA1-201ENST00000397381 GOLGA6L4A6NEF3 574 aa11.05□□□□□ -0.64
UCA1-201ENST00000397381 LIG1P18858 919 aa11.05□□□□□ -0.64
UCA1-201ENST00000397381 PSMA5P28066 241 aa11.05□□□□□ -0.64
UCA1-201ENST00000397381 PTH1RQ03431 593 aa11.05□□□□□ -0.64
UCA1-201ENST00000397381 ST3GAL1Q11201 340 aa11.05□□□□□ -0.64
UCA1-201ENST00000397381 NECTIN1Q15223 517 aa11.05□□□□□ -0.64
UCA1-201ENST00000397381 ANKRD1Q15327 319 aa11.05□□□□□ -0.64
UCA1-201ENST00000397381 ME3Q16798 604 aa11.05□□□□□ -0.64
UCA1-201ENST00000397381 ANO6Q4KMQ2 910 aa11.05□□□□□ -0.64
UCA1-201ENST00000397381 ZSCAN25Q6NSZ9 544 aa11.05□□□□□ -0.64
UCA1-201ENST00000397381 LUZP1Q86V48 1076 aa11.05□□□□□ -0.64
UCA1-201ENST00000397381 NECTIN2Q92692 538 aa11.05□□□□□ -0.64
UCA1-201ENST00000397381 PTPRUQ92729 1446 aa11.05□□□□□ -0.64
UCA1-201ENST00000397381 ALDH8A1Q9H2A2 487 aaPredicted RBP11.05□□□□□ -0.64
UCA1-201ENST00000397381 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.05□□□□□ -0.64
UCA1-201ENST00000397381 HIP1O00291 1037 aa11.05□□□□□ -0.64
UCA1-201ENST00000397381 TNNT1P13805 278 aa11.05□□□□□ -0.64
UCA1-201ENST00000397381 ADCK5Q3MIX3 580 aa11.05□□□□□ -0.64
UCA1-201ENST00000397381 HDGFL1Q5TGJ6 251 aa11.05□□□□□ -0.64
UCA1-201ENST00000397381 CCDC112Q8NEF3 446 aa11.05□□□□□ -0.64
UCA1-201ENST00000397381 TRIM5Q9C035 493 aa11.05□□□□□ -0.64
UCA1-201ENST00000397381 ECHDC1Q9NTX5 307 aa11.05□□□□□ -0.64
UCA1-201ENST00000397381 CTNNA3Q9UI47 895 aa11.05□□□□□ -0.64
UCA1-201ENST00000397381 NEMFO60524 1076 aa11.04□□□□□ -0.64
UCA1-201ENST00000397381 CLASRPQ8N2M8 674 aaKnown RBP11.04□□□□□ -0.64
UCA1-201ENST00000397381 PODXL2Q9NZ53 605 aa11.04□□□□□ -0.64
UCA1-201ENST00000397381 ROBO2Q9HCK4 1378 aa11.04□□□□□ -0.64
UCA1-201ENST00000397381 AMPHP49418 695 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 158.1 ms