RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 USP44Q9H0E7 712 aa10.93□□□□□ -0.66
CAPN3-206ENST00000397163 KCNF1Q9H3M0 494 aa10.93□□□□□ -0.66
CAPN3-206ENST00000397163 PPP1R42Q7Z4L9 355 aa10.93□□□□□ -0.66
CAPN3-206ENST00000397163 RHPN1Q8TCX5 695 aa10.93□□□□□ -0.66
CAPN3-206ENST00000397163 RAB11FIP3O75154 756 aa10.92□□□□□ -0.66
CAPN3-206ENST00000397163 LARGE1O95461 756 aa10.92□□□□□ -0.66
CAPN3-206ENST00000397163 THEMISQ8N1K5 641 aaPredicted RBP10.92□□□□□ -0.66
CAPN3-206ENST00000397163 MTMR6Q9Y217 621 aa10.92□□□□□ -0.66
CAPN3-206ENST00000397163 ARHGEF10O15013 1369 aa10.92□□□□□ -0.66
CAPN3-206ENST00000397163 PI4K2BQ8TCG2 481 aa10.92□□□□□ -0.66
CAPN3-206ENST00000397163 SSH3Q8TE77 659 aa10.92□□□□□ -0.66
CAPN3-206ENST00000397163 UBR1Q8IWV7 1749 aa10.92□□□□□ -0.66
CAPN3-206ENST00000397163 HDGFP51858 240 aaKnown RBP10.92□□□□□ -0.66
CAPN3-206ENST00000397163 JAKMIP1Q96N16 626 aaKnown RBP10.92□□□□□ -0.66
CAPN3-206ENST00000397163 PDRG1Q9NUG6 133 aa10.92□□□□□ -0.66
CAPN3-206ENST00000397163 ACEP12821 1306 aa10.91□□□□□ -0.66
CAPN3-206ENST00000397163 A2ML1A8K2U0 1454 aa10.91□□□□□ -0.66
CAPN3-206ENST00000397163 SRGAP3O43295 1099 aa10.91□□□□□ -0.66
CAPN3-206ENST00000397163 NCBP1Q09161 790 aaKnown RBP10.91□□□□□ -0.66
CAPN3-206ENST00000397163 KIF1BPQ96EK5 621 aa10.91□□□□□ -0.66
CAPN3-206ENST00000397163 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.91□□□□□ -0.66
CAPN3-206ENST00000397163 V9GYY5 206 aaPredicted RBP10.91□□□□□ -0.66
CAPN3-206ENST00000397163 TCHHQ07283 1943 aa10.91□□□□□ -0.66
CAPN3-206ENST00000397163 DRC7Q8IY82 874 aa10.91□□□□□ -0.66
CAPN3-206ENST00000397163 DDX54Q8TDD1 881 aaKnown RBP10.91□□□□□ -0.66
CAPN3-206ENST00000397163 C16orf45Q96MC5 204 aaPredicted RBP10.91□□□□□ -0.66
CAPN3-206ENST00000397163 HYPKQ9NX55 129 aa10.91□□□□□ -0.66
CAPN3-206ENST00000397163 PTGS1P23219 599 aa10.9□□□□□ -0.66
CAPN3-206ENST00000397163 OS9Q13438 667 aaPredicted RBP10.9□□□□□ -0.66
CAPN3-206ENST00000397163 CAMK4Q16566 473 aa10.9□□□□□ -0.66
CAPN3-206ENST00000397163 ANKRD7Q92527 254 aa10.9□□□□□ -0.66
CAPN3-206ENST00000397163 ST7Q9NRC1 585 aa10.9□□□□□ -0.66
CAPN3-206ENST00000397163 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.9□□□□□ -0.66
CAPN3-206ENST00000397163 PRPF40BQ6NWY9 871 aaKnown RBP10.9□□□□□ -0.66
CAPN3-206ENST00000397163 FAM200AQ8TCP9 573 aa10.9□□□□□ -0.66
CAPN3-206ENST00000397163 ZFP91Q96JP5 570 aaPredicted RBP10.9□□□□□ -0.66
CAPN3-206ENST00000397163 NUP62CLQ9H1M0 184 aa10.9□□□□□ -0.66
CAPN3-206ENST00000397163 AMPHP49418 695 aa10.9□□□□□ -0.67
CAPN3-206ENST00000397163 MAP3K11Q16584 847 aa10.9□□□□□ -0.67
CAPN3-206ENST00000397163 TAF7LQ5H9L4 462 aa10.9□□□□□ -0.67
CAPN3-206ENST00000397163 FERMT3Q86UX7 667 aa10.9□□□□□ -0.67
CAPN3-206ENST00000397163 NECAB1Q8N987 351 aa10.9□□□□□ -0.67
CAPN3-206ENST00000397163 RUFY2Q8WXA3 655 aa10.9□□□□□ -0.67
CAPN3-206ENST00000397163 ZSCAN31Q96LW9 406 aaPredicted RBP10.9□□□□□ -0.67
CAPN3-206ENST00000397163 CYP46A1Q9Y6A2 500 aa10.9□□□□□ -0.67
CAPN3-206ENST00000397163 NRKQ7Z2Y5 1582 aa10.89□□□□□ -0.67
CAPN3-206ENST00000397163 KRT85P78386 507 aa10.89□□□□□ -0.67
CAPN3-206ENST00000397163 SH2B1Q9NRF2 756 aaPredicted RBP10.89□□□□□ -0.67
CAPN3-206ENST00000397163 GOLGA6L4A6NEF3 574 aa10.89□□□□□ -0.67
CAPN3-206ENST00000397163 SLFN14P0C7P3 912 aa10.89□□□□□ -0.67
CAPN3-206ENST00000397163 ADCK5Q3MIX3 580 aa10.89□□□□□ -0.67
CAPN3-206ENST00000397163 HDGFL1Q5TGJ6 251 aa10.89□□□□□ -0.67
CAPN3-206ENST00000397163 VPS53Q5VIR6 699 aa10.89□□□□□ -0.67
CAPN3-206ENST00000397163 TAF3Q5VWG9 929 aa10.89□□□□□ -0.67
CAPN3-206ENST00000397163 LARP1BQ659C4 914 aaKnown RBP10.89□□□□□ -0.67
CAPN3-206ENST00000397163 EYA1Q99502 592 aa10.89□□□□□ -0.67
CAPN3-206ENST00000397163 OGFRQ9NZT2 677 aa10.89□□□□□ -0.67
CAPN3-206ENST00000397163 TYRO3Q06418 890 aa10.88□□□□□ -0.67
CAPN3-206ENST00000397163 CCDC186Q7Z3E2 898 aa10.88□□□□□ -0.67
CAPN3-206ENST00000397163 LUZP1Q86V48 1076 aa10.88□□□□□ -0.67
CAPN3-206ENST00000397163 KLHL34Q8N239 644 aa10.88□□□□□ -0.67
CAPN3-206ENST00000397163 ZNF592Q92610 1267 aa10.88□□□□□ -0.67
CAPN3-206ENST00000397163 PHAXQ9H814 394 aaKnown RBP10.88□□□□□ -0.67
CAPN3-206ENST00000397163 SLIT1O75093 1534 aa10.88□□□□□ -0.67
CAPN3-206ENST00000397163 OVOS2A0A0J9YW53 1432 aa10.88□□□□□ -0.67
CAPN3-206ENST00000397163 OVOS2Q6IE36 1432 aa10.88□□□□□ -0.67
CAPN3-206ENST00000397163 GNAT3A8MTJ3 354 aa10.88□□□□□ -0.67
CAPN3-206ENST00000397163 PTH1RQ03431 593 aa10.88□□□□□ -0.67
CAPN3-206ENST00000397163 TTC6Q86TZ1 520 aa10.88□□□□□ -0.67
CAPN3-206ENST00000397163 CKAP2LQ8IYA6 745 aa10.88□□□□□ -0.67
CAPN3-206ENST00000397163 GLRX3O76003 335 aaKnown RBP10.88□□□□□ -0.67
CAPN3-206ENST00000397163 LIG1P18858 919 aa10.88□□□□□ -0.67
CAPN3-206ENST00000397163 POLA2Q14181 598 aa10.88□□□□□ -0.67
CAPN3-206ENST00000397163 FAM173BQ6P4H8 233 aa10.88□□□□□ -0.67
CAPN3-206ENST00000397163 TRIM34Q9BYJ4 488 aa10.88□□□□□ -0.67
CAPN3-206ENST00000397163 TNMDQ9H2S6 317 aa10.88□□□□□ -0.67
CAPN3-206ENST00000397163 EID1Q9Y6B2 187 aa10.88□□□□□ -0.67
CAPN3-206ENST00000397163 ARHGAP23Q9P227 1491 aa10.87□□□□□ -0.67
CAPN3-206ENST00000397163 MON2Q7Z3U7 1717 aa10.87□□□□□ -0.67
CAPN3-206ENST00000397163 ZKSCAN1P17029 563 aaPredicted RBP10.87□□□□□ -0.67
CAPN3-206ENST00000397163 EIF2S2P20042 333 aaKnown RBP10.87□□□□□ -0.67
CAPN3-206ENST00000397163 ME3Q16798 604 aa10.87□□□□□ -0.67
CAPN3-206ENST00000397163 TRIM5Q9C035 493 aa10.87□□□□□ -0.67
CAPN3-206ENST00000397163 CTNNA3Q9UI47 895 aa10.87□□□□□ -0.67
CAPN3-206ENST00000397163 MRVI1Q9Y6F6 885 aa10.87□□□□□ -0.67
CAPN3-206ENST00000397163 CEP170BQ9Y4F5 1589 aaPredicted RBP10.87□□□□□ -0.67
CAPN3-206ENST00000397163 NPHP1O15259 732 aa10.87□□□□□ -0.67
CAPN3-206ENST00000397163 LRMPQ12912 555 aa10.87□□□□□ -0.67
CAPN3-206ENST00000397163 HSP90AB4PQ58FF6 505 aa10.87□□□□□ -0.67
CAPN3-206ENST00000397163 SIRT1Q96EB6 747 aa10.87□□□□□ -0.67
CAPN3-206ENST00000397163 CTIFO43310 598 aaKnown RBP10.86□□□□□ -0.67
CAPN3-206ENST00000397163 HTATSF1O43719 755 aaKnown RBP10.86□□□□□ -0.67
CAPN3-206ENST00000397163 NBPF7P0C2Y1 421 aaPredicted RBP10.86□□□□□ -0.67
CAPN3-206ENST00000397163 ANO6Q4KMQ2 910 aa10.86□□□□□ -0.67
CAPN3-206ENST00000397163 ZSWIM6Q9HCJ5 1215 aa10.86□□□□□ -0.67
CAPN3-206ENST00000397163 TAF7Q15545 349 aaPredicted RBP10.86□□□□□ -0.67
CAPN3-206ENST00000397163 CLASRPQ8N2M8 674 aaKnown RBP10.86□□□□□ -0.67
CAPN3-206ENST00000397163 CBX8Q9HC52 389 aa10.86□□□□□ -0.67
CAPN3-206ENST00000397163 DACT1Q9NYF0 836 aa10.86□□□□□ -0.67
CAPN3-206ENST00000397163 CAPN2P17655 700 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms