RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 CTCFLQ8NI51 663 aaPredicted RBP14.17□□□□□ -0.14
SMU1-201ENST00000397149 CEP120Q8N960 986 aa14.17□□□□□ -0.14
SMU1-201ENST00000397149 SEPT10Q9P0V9 454 aa14.17□□□□□ -0.14
SMU1-201ENST00000397149 ZBED9Q6R2W3 1325 aa14.17□□□□□ -0.14
SMU1-201ENST00000397149 ZPR1O75312 459 aa14.17□□□□□ -0.14
SMU1-201ENST00000397149 TMC6Q7Z403 805 aa14.17□□□□□ -0.14
SMU1-201ENST00000397149 ATRIPQ8WXE1 791 aa14.17□□□□□ -0.14
SMU1-201ENST00000397149 NAPBQ9H115 298 aa14.17□□□□□ -0.14
SMU1-201ENST00000397149 CALCOCO1Q9P1Z2 691 aa14.17□□□□□ -0.14
SMU1-201ENST00000397149 GTF2A1P52655 376 aaPredicted RBP14.17□□□□□ -0.14
SMU1-201ENST00000397149 XPCQ01831 940 aaPredicted RBP14.17□□□□□ -0.14
SMU1-201ENST00000397149 ZNF530Q6P9A1 599 aaPredicted RBP14.17□□□□□ -0.14
SMU1-201ENST00000397149 CARMIL1Q5VZK9 1371 aa14.17□□□□□ -0.14
SMU1-201ENST00000397149 SRCIN1Q9C0H9 1055 aa14.17□□□□□ -0.14
SMU1-201ENST00000397149 PPP6R1Q9UPN7 881 aa14.17□□□□□ -0.14
SMU1-201ENST00000397149 RAB11FIP4Q86YS3 637 aa14.16□□□□□ -0.14
SMU1-201ENST00000397149 PRKRIP1Q9H875 184 aaPredicted RBP14.16□□□□□ -0.14
SMU1-201ENST00000397149 CLEC11AQ9Y240 323 aa14.16□□□□□ -0.14
SMU1-201ENST00000397149 MIPOL1Q8TD10 442 aa14.16□□□□□ -0.14
SMU1-201ENST00000397149 SMG6Q86US8 1419 aaKnown RBP14.16□□□□□ -0.14
SMU1-201ENST00000397149 CCT2P78371 535 aaKnown RBP14.16□□□□□ -0.14
SMU1-201ENST00000397149 CKAP4Q07065 602 aaKnown RBP14.16□□□□□ -0.14
SMU1-201ENST00000397149 CCDC50Q8IVM0 306 aa14.16□□□□□ -0.14
SMU1-201ENST00000397149 CCT6BQ92526 530 aa14.16□□□□□ -0.14
SMU1-201ENST00000397149 PPP1R12AO14974 1030 aaPredicted RBP14.16□□□□□ -0.14
SMU1-201ENST00000397149 CFAP157Q5JU67 520 aa14.16□□□□□ -0.14
SMU1-201ENST00000397149 FAM114A1Q8IWE2 563 aa14.16□□□□□ -0.14
SMU1-201ENST00000397149 PPME1Q9Y570 386 aa14.16□□□□□ -0.14
SMU1-201ENST00000397149 UACAQ9BZF9 1416 aa14.16□□□□□ -0.14
SMU1-201ENST00000397149 CALML4Q96GE6 196 aa14.15□□□□□ -0.14
SMU1-201ENST00000397149 TXNDC16Q9P2K2 825 aa14.15□□□□□ -0.14
SMU1-201ENST00000397149 HSP90AA4PQ58FG1 418 aa14.15□□□□□ -0.14
SMU1-201ENST00000397149 GBP7Q8N8V2 638 aaPredicted RBP14.15□□□□□ -0.14
SMU1-201ENST00000397149 CCDC89Q8N998 374 aa14.15□□□□□ -0.14
SMU1-201ENST00000397149 TNIKQ9UKE5 1360 aa14.15□□□□□ -0.14
SMU1-201ENST00000397149 PTCD1O75127 700 aaKnown RBP14.15□□□□□ -0.14
SMU1-201ENST00000397149 CCDC65Q8IXS2 484 aa14.15□□□□□ -0.14
SMU1-201ENST00000397149 ANO10Q9NW15 660 aa14.15□□□□□ -0.14
SMU1-201ENST00000397149 ARID5AQ03989 594 aa14.15□□□□□ -0.14
SMU1-201ENST00000397149 RSPH3Q86UC2 560 aa14.15□□□□□ -0.14
SMU1-201ENST00000397149 C8orf76Q96K31 380 aa14.15□□□□□ -0.14
SMU1-201ENST00000397149 RSPH14Q9UHP6 348 aa14.15□□□□□ -0.14
SMU1-201ENST00000397149 SLC12A7Q9Y666 1083 aa14.14□□□□□ -0.15
SMU1-201ENST00000397149 BTBD11A6QL63 1104 aa14.14□□□□□ -0.15
SMU1-201ENST00000397149 SULT6B1Q6IMI4 303 aa14.14□□□□□ -0.15
SMU1-201ENST00000397149 C6orf229H3BNL8 230 aa14.14□□□□□ -0.15
SMU1-201ENST00000397149 ARID4AP29374 1257 aaPredicted RBP14.14□□□□□ -0.15
SMU1-201ENST00000397149 SSRP1Q08945 709 aaKnown RBP14.14□□□□□ -0.15
SMU1-201ENST00000397149 FAM114A2Q9NRY5 505 aa14.14□□□□□ -0.15
SMU1-201ENST00000397149 FAM169AQ9Y6X4 670 aa14.14□□□□□ -0.15
SMU1-201ENST00000397149 CLSTN2Q9H4D0 955 aa14.14□□□□□ -0.15
SMU1-201ENST00000397149 GOLGA8AA7E2F4 631 aa14.14□□□□□ -0.15
SMU1-201ENST00000397149 GOLGA8BA8MQT2 603 aa14.14□□□□□ -0.15
SMU1-201ENST00000397149 TBC1D5Q92609 795 aa14.14□□□□□ -0.15
SMU1-201ENST00000397149 BOLA2Q9H3K6 86 aa14.14□□□□□ -0.15
SMU1-201ENST00000397149 UAP1Q16222 522 aaPredicted RBP14.13□□□□□ -0.15
SMU1-201ENST00000397149 CUL4BQ13620 913 aa14.13□□□□□ -0.15
SMU1-201ENST00000397149 PPP4R3BQ5MIZ7 849 aa14.13□□□□□ -0.15
SMU1-201ENST00000397149 CCDC25Q86WR0 208 aa14.13□□□□□ -0.15
SMU1-201ENST00000397149 LRRC43Q8N309 656 aa14.13□□□□□ -0.15
SMU1-201ENST00000397149 USP47Q96K76 1375 aa14.13□□□□□ -0.15
SMU1-201ENST00000397149 ESPNB1AK53 854 aa14.13□□□□□ -0.15
SMU1-201ENST00000397149 KIF5AQ12840 1032 aa14.13□□□□□ -0.15
SMU1-201ENST00000397149 DNAJC21Q5F1R6 531 aaKnown RBP14.13□□□□□ -0.15
SMU1-201ENST00000397149 PRPF40BQ6NWY9 871 aaKnown RBP14.13□□□□□ -0.15
SMU1-201ENST00000397149 TCHPQ9BT92 498 aa14.13□□□□□ -0.15
SMU1-201ENST00000397149 FMN1Q68DA7 1419 aa14.13□□□□□ -0.15
SMU1-201ENST00000397149 PLS1Q14651 629 aa14.13□□□□□ -0.15
SMU1-201ENST00000397149 CCDC12Q8WUD4 166 aaPredicted RBP14.13□□□□□ -0.15
SMU1-201ENST00000397149 SPG7Q9UQ90 795 aa14.13□□□□□ -0.15
SMU1-201ENST00000397149 PTGS1P23219 599 aa14.13□□□□□ -0.15
SMU1-201ENST00000397149 RPGRQ92834 1020 aaKnown RBP14.13□□□□□ -0.15
SMU1-201ENST00000397149 MRRFQ96E11 262 aaKnown RBP14.13□□□□□ -0.15
SMU1-201ENST00000397149 CIZ1Q9ULV3 898 aaPredicted RBP14.13□□□□□ -0.15
SMU1-201ENST00000397149 GCC1Q96CN9 775 aa14.12□□□□□ -0.15
SMU1-201ENST00000397149 NSRP1Q9H0G5 558 aaKnown RBP14.12□□□□□ -0.15
SMU1-201ENST00000397149 KCNK9Q9NPC2 374 aa14.12□□□□□ -0.15
SMU1-201ENST00000397149 PPP2R5DQ14738 602 aa14.12□□□□□ -0.15
SMU1-201ENST00000397149 ZSCAN31Q96LW9 406 aaPredicted RBP14.12□□□□□ -0.15
SMU1-201ENST00000397149 CCDC170Q8IYT3 715 aa14.12□□□□□ -0.15
SMU1-201ENST00000397149 WDR66Q8TBY9 1149 aa14.12□□□□□ -0.15
SMU1-201ENST00000397149 BIN2Q9UBW5 565 aaPredicted RBP14.12□□□□□ -0.15
SMU1-201ENST00000397149 TACC3Q9Y6A5 838 aa14.12□□□□□ -0.15
SMU1-201ENST00000397149 CUX2O14529 1486 aa14.12□□□□□ -0.15
SMU1-201ENST00000397149 PPP1R21Q6ZMI0 780 aa14.12□□□□□ -0.15
SMU1-201ENST00000397149 IQCA1Q86XH1 822 aa14.12□□□□□ -0.15
SMU1-201ENST00000397149 CDCA7LQ96GN5 454 aa14.12□□□□□ -0.15
SMU1-201ENST00000397149 TTC21AQ8NDW8 1320 aa14.12□□□□□ -0.15
SMU1-201ENST00000397149 IFIT3O14879 490 aaKnown RBP14.12□□□□□ -0.15
SMU1-201ENST00000397149 TCP11L2Q8N4U5 519 aa14.12□□□□□ -0.15
SMU1-201ENST00000397149 ANKFY1Q9P2R3 1169 aa14.12□□□□□ -0.15
SMU1-201ENST00000397149 PPARDQ03181 441 aa14.11□□□□□ -0.15
SMU1-201ENST00000397149 KRT32Q14532 448 aa14.11□□□□□ -0.15
SMU1-201ENST00000397149 CCDC117Q8IWD4 279 aaPredicted RBP14.11□□□□□ -0.15
SMU1-201ENST00000397149 MICALL1Q8N3F8 863 aa14.11□□□□□ -0.15
SMU1-201ENST00000397149 SEC62Q99442 399 aaKnown RBP14.11□□□□□ -0.15
SMU1-201ENST00000397149 TCP11L1Q9NUJ3 509 aa14.11□□□□□ -0.15
SMU1-201ENST00000397149 CCT4P50991 539 aaKnown RBP14.11□□□□□ -0.15
SMU1-201ENST00000397149 DIXDC1Q155Q3 683 aa14.11□□□□□ -0.15
SMU1-201ENST00000397149 STXBP4Q6ZWJ1 553 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms