RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 VPS37CA5D8V6 355 aaPredicted RBP28.65■■■□□ 2.18
CSNK1E-203ENST00000396832 PLEKHG3A1L390 1219 aa28.64■■■□□ 2.18
CSNK1E-203ENST00000396832 ADCK5Q3MIX3 580 aa28.64■■■□□ 2.18
CSNK1E-203ENST00000396832 XRN1Q8IZH2 1706 aaKnown RBP28.64■■■□□ 2.18
CSNK1E-203ENST00000396832 LSG1Q9H089 658 aaKnown RBP28.64■■■□□ 2.18
CSNK1E-203ENST00000396832 IGSF1Q8N6C5 1336 aa28.64■■■□□ 2.17
CSNK1E-203ENST00000396832 SETD1BQ9UPS6 1966 aaKnown RBP28.64■■■□□ 2.17
CSNK1E-203ENST00000396832 GOLGA6L6A8MZA4 724 aa28.63■■■□□ 2.17
CSNK1E-203ENST00000396832 FAM208AQ9UK61 1670 aaKnown RBP28.63■■■□□ 2.17
CSNK1E-203ENST00000396832 SSH3Q8TE77 659 aa28.63■■■□□ 2.17
CSNK1E-203ENST00000396832 FEZ1Q99689 392 aa28.63■■■□□ 2.17
CSNK1E-203ENST00000396832 SBNO1A3KN83 1393 aa28.63■■■□□ 2.17
CSNK1E-203ENST00000396832 COL9A3Q14050 684 aaPredicted RBP28.62■■■□□ 2.17
CSNK1E-203ENST00000396832 NECAB1Q8N987 351 aa28.62■■■□□ 2.17
CSNK1E-203ENST00000396832 USP31Q70CQ4 1352 aa28.62■■■□□ 2.17
CSNK1E-203ENST00000396832 TECPR2O15040 1411 aa28.62■■■□□ 2.17
CSNK1E-203ENST00000396832 PTH1RQ03431 593 aa28.62■■■□□ 2.17
CSNK1E-203ENST00000396832 PRPF40BQ6NWY9 871 aaKnown RBP28.62■■■□□ 2.17
CSNK1E-203ENST00000396832 F13A1P00488 732 aa28.62■■■□□ 2.17
CSNK1E-203ENST00000396832 TAF7Q15545 349 aaPredicted RBP28.62■■■□□ 2.17
CSNK1E-203ENST00000396832 TTC14Q96N46 770 aa28.62■■■□□ 2.17
CSNK1E-203ENST00000396832 CHPF2Q9P2E5 772 aa28.62■■■□□ 2.17
CSNK1E-203ENST00000396832 GJB2P29033 226 aa28.61■■■□□ 2.17
CSNK1E-203ENST00000396832 FAM173BQ6P4H8 233 aa28.61■■■□□ 2.17
CSNK1E-203ENST00000396832 FERMT3Q86UX7 667 aa28.61■■■□□ 2.17
CSNK1E-203ENST00000396832 CNTROBQ8N137 903 aa28.61■■■□□ 2.17
CSNK1E-203ENST00000396832 TCEANC2Q96MN5 208 aa28.61■■■□□ 2.17
CSNK1E-203ENST00000396832 JAKMIP1Q96N16 626 aaKnown RBP28.61■■■□□ 2.17
CSNK1E-203ENST00000396832 LIMCH1Q9UPQ0 1083 aa28.61■■■□□ 2.17
CSNK1E-203ENST00000396832 FMN2Q9NZ56 1722 aa28.6■■■□□ 2.17
CSNK1E-203ENST00000396832 PI4KAP2A4QPH2 592 aa28.6■■■□□ 2.17
CSNK1E-203ENST00000396832 KCNQ3O43525 872 aa28.6■■■□□ 2.17
CSNK1E-203ENST00000396832 PI4KAP1Q8N8J0 262 aa28.6■■■□□ 2.17
CSNK1E-203ENST00000396832 PA2G4Q9UQ80 394 aaKnown RBP28.6■■■□□ 2.17
CSNK1E-203ENST00000396832 ATP6V1DQ9Y5K8 247 aa28.6■■■□□ 2.17
CSNK1E-203ENST00000396832 KDRP35968 1356 aa28.6■■■□□ 2.17
CSNK1E-203ENST00000396832 OGFRQ9NZT2 677 aa28.59■■■□□ 2.17
CSNK1E-203ENST00000396832 HDGFP51858 240 aaKnown RBP28.59■■■□□ 2.17
CSNK1E-203ENST00000396832 NCBP1Q09161 790 aaKnown RBP28.59■■■□□ 2.17
CSNK1E-203ENST00000396832 PTGS1P23219 599 aa28.58■■■□□ 2.17
CSNK1E-203ENST00000396832 FGD1P98174 961 aa28.58■■■□□ 2.17
CSNK1E-203ENST00000396832 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.57■■■□□ 2.16
CSNK1E-203ENST00000396832 KIF1BPQ96EK5 621 aa28.57■■■□□ 2.16
CSNK1E-203ENST00000396832 NALCNQ8IZF0 1738 aa28.57■■■□□ 2.16
CSNK1E-203ENST00000396832 TMEM2Q9UHN6 1383 aa28.57■■■□□ 2.16
CSNK1E-203ENST00000396832 CAMK4Q16566 473 aa28.56■■■□□ 2.16
CSNK1E-203ENST00000396832 ADAMTS13Q76LX8 1427 aa28.56■■■□□ 2.16
CSNK1E-203ENST00000396832 CCDC192P0DO97 292 aa28.56■■■□□ 2.16
CSNK1E-203ENST00000396832 HOXC9P31274 260 aa28.56■■■□□ 2.16
CSNK1E-203ENST00000396832 ZNF771Q7L3S4 317 aaPredicted RBP28.56■■■□□ 2.16
CSNK1E-203ENST00000396832 KLHL34Q8N239 644 aa28.56■■■□□ 2.16
CSNK1E-203ENST00000396832 MAP3K5Q99683 1374 aa28.56■■■□□ 2.16
CSNK1E-203ENST00000396832 LGR6Q9HBX8 967 aa28.56■■■□□ 2.16
CSNK1E-203ENST00000396832 AMOTL2Q9Y2J4 779 aa28.55■■■□□ 2.16
CSNK1E-203ENST00000396832 SIRT1Q96EB6 747 aa28.55■■■□□ 2.16
CSNK1E-203ENST00000396832 RGPD8O14715 1765 aaPredicted RBP28.54■■■□□ 2.16
CSNK1E-203ENST00000396832 TNRQ92752 1358 aa28.54■■■□□ 2.16
CSNK1E-203ENST00000396832 PDRG1Q9NUG6 133 aa28.54■■■□□ 2.16
CSNK1E-203ENST00000396832 HYPKQ9NX55 129 aa28.54■■■□□ 2.16
CSNK1E-203ENST00000396832 EPB41L2O43491 1005 aaKnown RBP28.53■■■□□ 2.16
CSNK1E-203ENST00000396832 KCNJ4P48050 445 aa28.53■■■□□ 2.16
CSNK1E-203ENST00000396832 POLA2Q14181 598 aa28.53■■■□□ 2.16
CSNK1E-203ENST00000396832 CTNNA3Q9UI47 895 aa28.52■■■□□ 2.16
CSNK1E-203ENST00000396832 PPP6R1Q9UPN7 881 aa28.52■■■□□ 2.16
CSNK1E-203ENST00000396832 RAB11FIP3O75154 756 aa28.52■■■□□ 2.16
CSNK1E-203ENST00000396832 C16orf45Q96MC5 204 aaPredicted RBP28.52■■■□□ 2.16
CSNK1E-203ENST00000396832 PTPRUQ92729 1446 aa28.52■■■□□ 2.16
CSNK1E-203ENST00000396832 AOX1Q06278 1338 aa28.52■■■□□ 2.16
CSNK1E-203ENST00000396832 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP28.51■■■□□ 2.16
CSNK1E-203ENST00000396832 MTMR6Q9Y217 621 aa28.51■■■□□ 2.16
CSNK1E-203ENST00000396832 ST3GAL1Q11201 340 aa28.51■■■□□ 2.15
CSNK1E-203ENST00000396832 ABTB2Q8N961 1025 aa28.51■■■□□ 2.15
CSNK1E-203ENST00000396832 BCL11BQ9C0K0 894 aaPredicted RBP28.51■■■□□ 2.15
CSNK1E-203ENST00000396832 TOPAZ1Q8N9V7 1692 aa28.51■■■□□ 2.15
CSNK1E-203ENST00000396832 CCDC186Q7Z3E2 898 aa28.5■■■□□ 2.15
CSNK1E-203ENST00000396832 FAM200AQ8TCP9 573 aa28.5■■■□□ 2.15
CSNK1E-203ENST00000396832 DNAAF4Q8WXU2 420 aa28.5■■■□□ 2.15
CSNK1E-203ENST00000396832 ME3Q16798 604 aa28.5■■■□□ 2.15
CSNK1E-203ENST00000396832 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.5■■■□□ 2.15
CSNK1E-203ENST00000396832 SMTNL1A8MU46 457 aa28.5■■■□□ 2.15
CSNK1E-203ENST00000396832 LRMPQ12912 555 aa28.5■■■□□ 2.15
CSNK1E-203ENST00000396832 SYCP1Q15431 976 aa28.5■■■□□ 2.15
CSNK1E-203ENST00000396832 TAF3Q5VWG9 929 aa28.49■■■□□ 2.15
CSNK1E-203ENST00000396832 FAM227BQ96M60 508 aa28.49■■■□□ 2.15
CSNK1E-203ENST00000396832 CKAP2LQ8IYA6 745 aa28.49■■■□□ 2.15
CSNK1E-203ENST00000396832 RBM33Q96EV2 1170 aaKnown RBP28.49■■■□□ 2.15
CSNK1E-203ENST00000396832 TTC21AQ8NDW8 1320 aa28.49■■■□□ 2.15
CSNK1E-203ENST00000396832 LUZP1Q86V48 1076 aa28.48■■■□□ 2.15
CSNK1E-203ENST00000396832 AGLP35573 1532 aa28.48■■■□□ 2.15
CSNK1E-203ENST00000396832 STK3Q13188 491 aa28.48■■■□□ 2.15
CSNK1E-203ENST00000396832 NAA30Q147X3 362 aaPredicted RBP28.48■■■□□ 2.15
CSNK1E-203ENST00000396832 CWF19L2Q2TBE0 894 aaKnown RBP28.48■■■□□ 2.15
CSNK1E-203ENST00000396832 BEND3Q5T5X7 828 aa28.48■■■□□ 2.15
CSNK1E-203ENST00000396832 CDC37L1Q7L3B6 337 aa28.48■■■□□ 2.15
CSNK1E-203ENST00000396832 DRC7Q8IY82 874 aa28.48■■■□□ 2.15
CSNK1E-203ENST00000396832 TNNT1P13805 278 aa28.47■■■□□ 2.15
CSNK1E-203ENST00000396832 BBXQ8WY36 941 aaPredicted RBP28.47■■■□□ 2.15
CSNK1E-203ENST00000396832 CGNQ9P2M7 1197 aaKnown RBP28.47■■■□□ 2.15
CSNK1E-203ENST00000396832 TAF6LQ9Y6J9 622 aa28.47■■■□□ 2.15
CSNK1E-203ENST00000396832 CLASRPQ8N2M8 674 aaKnown RBP28.46■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms