RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 IL6STP40189 918 aaPredicted RBP11.48□□□□□ -0.57
SCFD1-202ENST00000396629 TTC5Q8N0Z6 440 aa11.48□□□□□ -0.57
SCFD1-202ENST00000396629 HEG1Q9ULI3 1381 aa11.48□□□□□ -0.57
SCFD1-202ENST00000396629 RASSF10A6NK89 507 aa11.48□□□□□ -0.57
SCFD1-202ENST00000396629 HMOX1P09601 288 aa11.48□□□□□ -0.57
SCFD1-202ENST00000396629 HSPA8P11142 646 aaKnown RBP11.48□□□□□ -0.57
SCFD1-202ENST00000396629 CNBD1Q8NA66 436 aa11.48□□□□□ -0.57
SCFD1-202ENST00000396629 ZNF496Q96IT1 587 aaPredicted RBP11.48□□□□□ -0.57
SCFD1-202ENST00000396629 SETDB2Q96T68 719 aa11.48□□□□□ -0.57
SCFD1-202ENST00000396629 CAMTA2O94983 1202 aa11.47□□□□□ -0.57
SCFD1-202ENST00000396629 ST5P78524 1137 aa11.47□□□□□ -0.57
SCFD1-202ENST00000396629 ABHD8Q96I13 439 aa11.47□□□□□ -0.57
SCFD1-202ENST00000396629 DEFB115Q30KQ5 88 aa11.47□□□□□ -0.57
SCFD1-202ENST00000396629 HACL1Q9UJ83 578 aa11.47□□□□□ -0.57
SCFD1-202ENST00000396629 THSD7BQ9C0I4 1608 aa11.46□□□□□ -0.57
SCFD1-202ENST00000396629 FKBP4Q02790 459 aaKnown RBP eCLIP11.46□□□□□ -0.57
SCFD1-202ENST00000396629 CCDC93Q567U6 631 aa11.46□□□□□ -0.57
SCFD1-202ENST00000396629 EAPPQ56P03 285 aaPredicted RBP11.46□□□□□ -0.57
SCFD1-202ENST00000396629 ZNF790Q6PG37 636 aa11.46□□□□□ -0.57
SCFD1-202ENST00000396629 ZNF541Q9H0D2 1346 aa11.46□□□□□ -0.58
SCFD1-202ENST00000396629 EPHX2P34913 555 aa11.45□□□□□ -0.58
SCFD1-202ENST00000396629 KNSTRNQ9Y448 316 aa11.45□□□□□ -0.58
SCFD1-202ENST00000396629 KLRG2A4D1S0 409 aaPredicted RBP11.45□□□□□ -0.58
SCFD1-202ENST00000396629 A1BGP04217 495 aa11.45□□□□□ -0.58
SCFD1-202ENST00000396629 HSPA5P11021 654 aaKnown RBP11.45□□□□□ -0.58
SCFD1-202ENST00000396629 MAP2K1Q02750 393 aaPredicted RBP11.45□□□□□ -0.58
SCFD1-202ENST00000396629 FAM161AQ3B820 660 aa11.45□□□□□ -0.58
SCFD1-202ENST00000396629 AMER1Q5JTC6 1135 aaPredicted RBP11.45□□□□□ -0.58
SCFD1-202ENST00000396629 CNTROBQ8N137 903 aa11.45□□□□□ -0.58
SCFD1-202ENST00000396629 IL17REQ8NFR9 667 aa11.45□□□□□ -0.58
SCFD1-202ENST00000396629 CLEC11AQ9Y240 323 aa11.45□□□□□ -0.58
SCFD1-202ENST00000396629 ZNF330Q9Y3S2 320 aaPredicted RBP11.45□□□□□ -0.58
SCFD1-202ENST00000396629 WDR33Q9C0J8 1336 aaKnown RBP11.44□□□□□ -0.58
SCFD1-202ENST00000396629 NPHP1O15259 732 aa11.44□□□□□ -0.58
SCFD1-202ENST00000396629 NPR1P16066 1061 aa11.44□□□□□ -0.58
SCFD1-202ENST00000396629 EIF4G2P78344 907 aaKnown RBP eCLIP11.44□□□□□ -0.58
SCFD1-202ENST00000396629 PNMA8AQ86V59 439 aaPredicted RBP11.44□□□□□ -0.58
SCFD1-202ENST00000396629 TRPM7Q96QT4 1865 aa11.44□□□□□ -0.58
SCFD1-202ENST00000396629 FZD9O00144 591 aa11.43□□□□□ -0.58
SCFD1-202ENST00000396629 RGS19P49795 217 aa11.43□□□□□ -0.58
SCFD1-202ENST00000396629 TEFQ10587 303 aa11.43□□□□□ -0.58
SCFD1-202ENST00000396629 DZIP3Q86Y13 1208 aaKnown RBP11.43□□□□□ -0.58
SCFD1-202ENST00000396629 FMNL2Q96PY5 1086 aa11.43□□□□□ -0.58
SCFD1-202ENST00000396629 ZNF277Q9NRM2 450 aaPredicted RBP11.43□□□□□ -0.58
SCFD1-202ENST00000396629 DIAPH1O60610 1272 aaKnown RBP11.43□□□□□ -0.58
SCFD1-202ENST00000396629 MAP1SQ66K74 1059 aaPredicted RBP11.43□□□□□ -0.58
SCFD1-202ENST00000396629 CLEC4GQ6UXB4 293 aa11.43□□□□□ -0.58
SCFD1-202ENST00000396629 RTKN2Q8IZC4 609 aa11.43□□□□□ -0.58
SCFD1-202ENST00000396629 GNAT3A8MTJ3 354 aa11.42□□□□□ -0.58
SCFD1-202ENST00000396629 NPM2Q86SE8 214 aaKnown RBP11.42□□□□□ -0.58
SCFD1-202ENST00000396629 LTBP1Q14766 1721 aa11.42□□□□□ -0.58
SCFD1-202ENST00000396629 IARSP41252 1262 aaKnown RBP11.42□□□□□ -0.58
SCFD1-202ENST00000396629 NBPF5PQ86XG9 351 aaPredicted RBP11.42□□□□□ -0.58
SCFD1-202ENST00000396629 GPC2Q8N158 579 aa11.42□□□□□ -0.58
SCFD1-202ENST00000396629 RNF123Q5XPI4 1314 aa11.41□□□□□ -0.58
SCFD1-202ENST00000396629 OLFM4Q6UX06 510 aa11.41□□□□□ -0.58
SCFD1-202ENST00000396629 SYNE4Q8N205 404 aa11.41□□□□□ -0.58
SCFD1-202ENST00000396629 GAS2L2Q8NHY3 880 aa11.41□□□□□ -0.58
SCFD1-202ENST00000396629 DDX21Q9NR30 783 aaKnown RBP eCLIP11.41□□□□□ -0.58
SCFD1-202ENST00000396629 CEMIPQ8WUJ3 1361 aa11.41□□□□□ -0.58
SCFD1-202ENST00000396629 SNED1Q8TER0 1413 aa11.41□□□□□ -0.58
SCFD1-202ENST00000396629 RGL2O15211 777 aa11.4□□□□□ -0.58
SCFD1-202ENST00000396629 PCDH10Q9P2E7 1040 aa11.4□□□□□ -0.58
SCFD1-202ENST00000396629 ABT1Q9ULW3 272 aaKnown RBP11.4□□□□□ -0.58
SCFD1-202ENST00000396629 COL3A1P02461 1466 aaPredicted RBP11.4□□□□□ -0.59
SCFD1-202ENST00000396629 KCNQ3O43525 872 aa11.4□□□□□ -0.59
SCFD1-202ENST00000396629 ALDH1B1P30837 517 aa11.4□□□□□ -0.59
SCFD1-202ENST00000396629 MLLT1Q03111 559 aaPredicted RBP11.4□□□□□ -0.59
SCFD1-202ENST00000396629 TPTE2Q6XPS3 522 aa11.4□□□□□ -0.59
SCFD1-202ENST00000396629 ZNF652Q9Y2D9 606 aa11.4□□□□□ -0.59
SCFD1-202ENST00000396629 USP16Q9Y5T5 823 aa11.4□□□□□ -0.59
SCFD1-202ENST00000396629 CAPNS2Q96L46 248 aa11.39□□□□□ -0.59
SCFD1-202ENST00000396629 PSMD1Q99460 953 aa11.39□□□□□ -0.59
SCFD1-202ENST00000396629 CCDC85CA6NKD9 419 aa11.38□□□□□ -0.59
SCFD1-202ENST00000396629 ECE1P42892 770 aa11.38□□□□□ -0.59
SCFD1-202ENST00000396629 COL4A5P29400 1685 aa11.38□□□□□ -0.59
SCFD1-202ENST00000396629 CLSPNQ9HAW4 1339 aa11.38□□□□□ -0.59
SCFD1-202ENST00000396629 BTBD11A6QL63 1104 aa11.38□□□□□ -0.59
SCFD1-202ENST00000396629 PIP4K2AP48426 406 aaPredicted RBP11.38□□□□□ -0.59
SCFD1-202ENST00000396629 FMR1Q06787 632 aaKnown RBP eCLIP11.37□□□□□ -0.59
SCFD1-202ENST00000396629 JDP2Q8WYK2 163 aa11.37□□□□□ -0.59
SCFD1-202ENST00000396629 GPR101Q96P66 508 aaPredicted RBP11.37□□□□□ -0.59
SCFD1-202ENST00000396629 NIP7Q9Y221 180 aaKnown RBP eCLIP11.37□□□□□ -0.59
SCFD1-202ENST00000396629 PRAMEF22A3QJZ6 481 aa11.36□□□□□ -0.59
SCFD1-202ENST00000396629 PER1O15534 1290 aaPredicted RBP11.36□□□□□ -0.59
SCFD1-202ENST00000396629 EIF6P56537 245 aaKnown RBP11.36□□□□□ -0.59
SCFD1-202ENST00000396629 CST9Q5W186 159 aa11.36□□□□□ -0.59
SCFD1-202ENST00000396629 CC2D2BQ6DHV5 1058 aa11.36□□□□□ -0.59
SCFD1-202ENST00000396629 CYP4F22Q6NT55 531 aa11.36□□□□□ -0.59
SCFD1-202ENST00000396629 BEGAINQ9BUH8 593 aa11.36□□□□□ -0.59
SCFD1-202ENST00000396629 TLL2Q9Y6L7 1015 aa11.36□□□□□ -0.59
SCFD1-202ENST00000396629 NUP98P52948 1817 aa11.36□□□□□ -0.59
SCFD1-202ENST00000396629 LMOD1P29536 600 aaPredicted RBP11.36□□□□□ -0.59
SCFD1-202ENST00000396629 MAP2K2P36507 400 aa11.36□□□□□ -0.59
SCFD1-202ENST00000396629 SCNN1DP51172 638 aa11.36□□□□□ -0.59
SCFD1-202ENST00000396629 USP50Q70EL3 339 aaPredicted RBP11.36□□□□□ -0.59
SCFD1-202ENST00000396629 GJA3Q9Y6H8 435 aa11.36□□□□□ -0.59
SCFD1-202ENST00000396629 CASP8AP2Q9UKL3 1982 aa11.35□□□□□ -0.59
SCFD1-202ENST00000396629 NBPF26B4DH59 902 aa11.35□□□□□ -0.59
SCFD1-202ENST00000396629 SNRPA1P09661 255 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms