RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 CPDO75976 1380 aa20.17■□□□□ 0.82
TRIM39-205ENST00000396551 GLI3P10071 1580 aa20.16■□□□□ 0.82
TRIM39-205ENST00000396551 BICC1Q9H694 974 aaKnown RBP20.16■□□□□ 0.82
TRIM39-205ENST00000396551 PLEKHG2Q9H7P9 1386 aa20.16■□□□□ 0.82
TRIM39-205ENST00000396551 TTC41PQ6P2S7 1318 aa20.16■□□□□ 0.82
TRIM39-205ENST00000396551 XRCC6P12956 609 aaKnown RBP eCLIP20.16■□□□□ 0.82
TRIM39-205ENST00000396551 LRP10Q7Z4F1 713 aa20.16■□□□□ 0.82
TRIM39-205ENST00000396551 XAGE3Q8WTP9 111 aa20.16■□□□□ 0.82
TRIM39-205ENST00000396551 TMX3Q96JJ7 454 aa20.16■□□□□ 0.82
TRIM39-205ENST00000396551 SGSM2O43147 1006 aa20.15■□□□□ 0.82
TRIM39-205ENST00000396551 RIC3Q7Z5B4 369 aa20.15■□□□□ 0.82
TRIM39-205ENST00000396551 CNTROBQ8N137 903 aa20.15■□□□□ 0.82
TRIM39-205ENST00000396551 DCAF5Q96JK2 942 aa20.15■□□□□ 0.82
TRIM39-205ENST00000396551 USP16Q9Y5T5 823 aa20.15■□□□□ 0.82
TRIM39-205ENST00000396551 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.15■□□□□ 0.82
TRIM39-205ENST00000396551 EPB41L2O43491 1005 aaKnown RBP20.15■□□□□ 0.82
TRIM39-205ENST00000396551 PTMSP20962 102 aa20.15■□□□□ 0.82
TRIM39-205ENST00000396551 CLASRPQ8N2M8 674 aaKnown RBP20.15■□□□□ 0.82
TRIM39-205ENST00000396551 HDAC5Q9UQL6 1122 aa20.15■□□□□ 0.82
TRIM39-205ENST00000396551 ZDHHC9Q9Y397 364 aa20.15■□□□□ 0.82
TRIM39-205ENST00000396551 HSPA4P34932 840 aa20.14■□□□□ 0.82
TRIM39-205ENST00000396551 SKOR2Q2VWA4 1001 aaPredicted RBP20.14■□□□□ 0.82
TRIM39-205ENST00000396551 LARP1Q6PKG0 1096 aaKnown RBP20.14■□□□□ 0.82
TRIM39-205ENST00000396551 COPS6Q7L5N1 327 aa20.14■□□□□ 0.82
TRIM39-205ENST00000396551 PODXL2Q9NZ53 605 aa20.14■□□□□ 0.82
TRIM39-205ENST00000396551 PARP4Q9UKK3 1724 aaKnown RBP20.14■□□□□ 0.81
TRIM39-205ENST00000396551 NEURL1BA8MQ27 555 aa20.14■□□□□ 0.81
TRIM39-205ENST00000396551 GLRX3O76003 335 aaKnown RBP20.14■□□□□ 0.81
TRIM39-205ENST00000396551 PIP4K2AP48426 406 aaPredicted RBP20.13■□□□□ 0.81
TRIM39-205ENST00000396551 BRINP3Q76B58 766 aa20.13■□□□□ 0.81
TRIM39-205ENST00000396551 SASH1O94885 1247 aa20.13■□□□□ 0.81
TRIM39-205ENST00000396551 RAD50Q92878 1312 aa20.12■□□□□ 0.81
TRIM39-205ENST00000396551 AFDNP55196 1824 aaKnown RBP20.12■□□□□ 0.81
TRIM39-205ENST00000396551 MCM2P49736 904 aa20.12■□□□□ 0.81
TRIM39-205ENST00000396551 ERC1Q8IUD2 1116 aa20.12■□□□□ 0.81
TRIM39-205ENST00000396551 LSG1Q9H089 658 aaKnown RBP20.12■□□□□ 0.81
TRIM39-205ENST00000396551 SNRPA1P09661 255 aaKnown RBP20.12■□□□□ 0.81
TRIM39-205ENST00000396551 CUL4AQ13619 759 aa20.12■□□□□ 0.81
TRIM39-205ENST00000396551 METTL22Q9BUU2 404 aaPredicted RBP20.12■□□□□ 0.81
TRIM39-205ENST00000396551 UPF3BQ9BZI7 483 aaKnown RBP20.12■□□□□ 0.81
TRIM39-205ENST00000396551 LAMB4A4D0S4 1761 aa20.12■□□□□ 0.81
TRIM39-205ENST00000396551 ARFGEF2Q9Y6D5 1785 aa20.12■□□□□ 0.81
TRIM39-205ENST00000396551 MYD88Q99836 296 aa20.12■□□□□ 0.81
TRIM39-205ENST00000396551 ECHDC1Q9NTX5 307 aa20.12■□□□□ 0.81
TRIM39-205ENST00000396551 TTC5Q8N0Z6 440 aa20.11■□□□□ 0.81
TRIM39-205ENST00000396551 GCKRQ14397 625 aa20.11■□□□□ 0.81
TRIM39-205ENST00000396551 EPHA10Q5JZY3 1008 aa20.1■□□□□ 0.81
TRIM39-205ENST00000396551 PANK2Q9BZ23 570 aa20.1■□□□□ 0.81
TRIM39-205ENST00000396551 GOLGA6L22H0YM25 854 aa20.1■□□□□ 0.81
TRIM39-205ENST00000396551 MCTP1Q6DN14 999 aa20.1■□□□□ 0.81
TRIM39-205ENST00000396551 CWC27Q6UX04 472 aaKnown RBP20.1■□□□□ 0.81
TRIM39-205ENST00000396551 AACSQ86V21 672 aa20.1■□□□□ 0.81
TRIM39-205ENST00000396551 PKNOX2Q96KN3 472 aa20.1■□□□□ 0.81
TRIM39-205ENST00000396551 FMNL2Q96PY5 1086 aa20.1■□□□□ 0.81
TRIM39-205ENST00000396551 IFIT2P09913 472 aaKnown RBP20.1■□□□□ 0.81
TRIM39-205ENST00000396551 NEXNQ0ZGT2 675 aa20.1■□□□□ 0.81
TRIM39-205ENST00000396551 NOL8Q76FK4 1167 aaKnown RBP20.1■□□□□ 0.81
TRIM39-205ENST00000396551 CABP4P57796 275 aa20.09■□□□□ 0.81
TRIM39-205ENST00000396551 ANKRD13DQ6ZTN6 518 aa20.09■□□□□ 0.81
TRIM39-205ENST00000396551 GAS2L3Q86XJ1 694 aa20.09■□□□□ 0.81
TRIM39-205ENST00000396551 EAF2Q96CJ1 260 aaPredicted RBP20.09■□□□□ 0.81
TRIM39-205ENST00000396551 SNX14Q9Y5W7 946 aa20.08■□□□□ 0.81
TRIM39-205ENST00000396551 KLHDC4Q8TBB5 520 aa20.08■□□□□ 0.8
TRIM39-205ENST00000396551 STRCQ7RTU9 1775 aa20.08■□□□□ 0.8
TRIM39-205ENST00000396551 G3BP1Q13283 466 aaKnown RBP eCLIP20.08■□□□□ 0.8
TRIM39-205ENST00000396551 SIL1Q9H173 461 aa20.07■□□□□ 0.8
TRIM39-205ENST00000396551 LMBRD1Q9NUN5 540 aa20.07■□□□□ 0.8
TRIM39-205ENST00000396551 MRE11P49959 708 aa20.07■□□□□ 0.8
TRIM39-205ENST00000396551 KLHL40Q2TBA0 621 aa20.07■□□□□ 0.8
TRIM39-205ENST00000396551 RASEFQ8IZ41 740 aa20.07■□□□□ 0.8
TRIM39-205ENST00000396551 TLR7Q9NYK1 1049 aaKnown RBP20.07■□□□□ 0.8
TRIM39-205ENST00000396551 JARID2Q92833 1246 aaPredicted RBP20.06■□□□□ 0.8
TRIM39-205ENST00000396551 GPATCH3Q96I76 525 aa20.06■□□□□ 0.8
TRIM39-205ENST00000396551 CCDC8Q9H0W5 538 aaPredicted RBP20.06■□□□□ 0.8
TRIM39-205ENST00000396551 ABCA3Q99758 1704 aa20.06■□□□□ 0.8
TRIM39-205ENST00000396551 WDR17Q8IZU2 1322 aa20.06■□□□□ 0.8
TRIM39-205ENST00000396551 GRPEL1Q9HAV7 217 aa20.06■□□□□ 0.8
TRIM39-205ENST00000396551 UBR2Q8IWV8 1755 aa20.06■□□□□ 0.8
TRIM39-205ENST00000396551 CHAMP1Q96JM3 812 aa20.06■□□□□ 0.8
TRIM39-205ENST00000396551 DIAPH3Q9NSV4 1193 aa20.06■□□□□ 0.8
TRIM39-205ENST00000396551 DDX49Q9Y6V7 483 aaKnown RBP20.06■□□□□ 0.8
TRIM39-205ENST00000396551 INTS4Q96HW7 963 aaKnown RBP20.05■□□□□ 0.8
TRIM39-205ENST00000396551 DNAJC5Q9H3Z4 198 aa20.05■□□□□ 0.8
TRIM39-205ENST00000396551 ISY1Q9ULR0 285 aaKnown RBP20.05■□□□□ 0.8
TRIM39-205ENST00000396551 SHANK3Q9BYB0 1731 aa20.05■□□□□ 0.8
TRIM39-205ENST00000396551 PRDM11Q9NQV5 511 aa20.04■□□□□ 0.8
TRIM39-205ENST00000396551 COL5A2P05997 1499 aaPredicted RBP20.04■□□□□ 0.8
TRIM39-205ENST00000396551 PTH1RQ03431 593 aa20.04■□□□□ 0.8
TRIM39-205ENST00000396551 EVI5LQ96CN4 794 aa20.04■□□□□ 0.8
TRIM39-205ENST00000396551 TTC14Q96N46 770 aa20.04■□□□□ 0.8
TRIM39-205ENST00000396551 SOS2Q07890 1332 aaPredicted RBP20.04■□□□□ 0.8
TRIM39-205ENST00000396551 KIAA1211Q6ZU35 1233 aa20.03■□□□□ 0.8
TRIM39-205ENST00000396551 BRD1O95696 1058 aa20.03■□□□□ 0.8
TRIM39-205ENST00000396551 RFX5P48382 616 aaPredicted RBP20.03■□□□□ 0.8
TRIM39-205ENST00000396551 PAPPAQ13219 1627 aa20.03■□□□□ 0.8
TRIM39-205ENST00000396551 FOXD4L5Q5VV16 416 aaPredicted RBP20.02■□□□□ 0.8
TRIM39-205ENST00000396551 TOM1L2Q6ZVM7 507 aa20.02■□□□□ 0.8
TRIM39-205ENST00000396551 ZCRB1Q8TBF4 217 aaKnown RBP20.02■□□□□ 0.8
TRIM39-205ENST00000396551 FOXD4L4Q8WXT5 416 aaPredicted RBP20.02■□□□□ 0.8
TRIM39-205ENST00000396551 ATP5J2-PTCD1G3V325 749 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms