RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 BCORQ6W2J9 1755 aa22.65■■□□□ 1.22
TNFSF13-205ENST00000396545 RTF1Q92541 710 aaKnown RBP22.65■■□□□ 1.22
TNFSF13-205ENST00000396545 COL11A2P13942 1736 aaPredicted RBP22.65■■□□□ 1.22
TNFSF13-205ENST00000396545 C16orf71Q8IYS4 520 aaPredicted RBP22.64■■□□□ 1.22
TNFSF13-205ENST00000396545 CDCA7LQ96GN5 454 aa22.64■■□□□ 1.22
TNFSF13-205ENST00000396545 PDZRN3Q9UPQ7 1066 aa22.64■■□□□ 1.22
TNFSF13-205ENST00000396545 USP16Q9Y5T5 823 aa22.64■■□□□ 1.22
TNFSF13-205ENST00000396545 PRAMEF22A3QJZ6 481 aa22.63■■□□□ 1.21
TNFSF13-205ENST00000396545 PDE6BP35913 854 aa22.63■■□□□ 1.21
TNFSF13-205ENST00000396545 NPM2Q86SE8 214 aaKnown RBP22.63■■□□□ 1.21
TNFSF13-205ENST00000396545 NFKBIEO00221 500 aa22.63■■□□□ 1.21
TNFSF13-205ENST00000396545 DZIP3Q86Y13 1208 aaKnown RBP22.63■■□□□ 1.21
TNFSF13-205ENST00000396545 SETDB2Q96T68 719 aa22.63■■□□□ 1.21
TNFSF13-205ENST00000396545 RRAGCQ9HB90 399 aa22.63■■□□□ 1.21
TNFSF13-205ENST00000396545 HTATSF1O43719 755 aaKnown RBP22.62■■□□□ 1.21
TNFSF13-205ENST00000396545 SNRPA1P09661 255 aaKnown RBP22.62■■□□□ 1.21
TNFSF13-205ENST00000396545 CCDC24Q8N4L8 307 aa22.62■■□□□ 1.21
TNFSF13-205ENST00000396545 TIAM2Q8IVF5 1701 aa22.61■■□□□ 1.21
TNFSF13-205ENST00000396545 PIP4K2AP48426 406 aaPredicted RBP22.61■■□□□ 1.21
TNFSF13-205ENST00000396545 FSTL1Q12841 308 aa22.61■■□□□ 1.21
TNFSF13-205ENST00000396545 DCTN1Q14203 1278 aa22.61■■□□□ 1.21
TNFSF13-205ENST00000396545 DNAJC5GQ8N7S2 189 aa22.61■■□□□ 1.21
TNFSF13-205ENST00000396545 CNBD1Q8NA66 436 aa22.61■■□□□ 1.21
TNFSF13-205ENST00000396545 CCDC146Q8IYE0 955 aa22.6■■□□□ 1.21
TNFSF13-205ENST00000396545 ZNF622Q969S3 477 aaKnown RBP eCLIP22.6■■□□□ 1.21
TNFSF13-205ENST00000396545 PPP4R2Q9NY27 417 aa22.6■■□□□ 1.21
TNFSF13-205ENST00000396545 WDR90Q96KV7 1748 aa22.6■■□□□ 1.21
TNFSF13-205ENST00000396545 APAF1O14727 1248 aa22.59■■□□□ 1.21
TNFSF13-205ENST00000396545 RCAN3Q9UKA8 241 aa22.59■■□□□ 1.21
TNFSF13-205ENST00000396545 GLTPD2A6NH11 291 aa22.59■■□□□ 1.21
TNFSF13-205ENST00000396545 CCDC88AQ3V6T2 1871 aa22.58■■□□□ 1.21
TNFSF13-205ENST00000396545 NEFMP07197 916 aa22.58■■□□□ 1.2
TNFSF13-205ENST00000396545 CLEC4GQ6UXB4 293 aa22.58■■□□□ 1.2
TNFSF13-205ENST00000396545 C21orf2O43822 256 aa22.57■■□□□ 1.2
TNFSF13-205ENST00000396545 ST5P78524 1137 aa22.57■■□□□ 1.2
TNFSF13-205ENST00000396545 FER1L6Q2WGJ9 1857 aa22.57■■□□□ 1.2
TNFSF13-205ENST00000396545 IFFO2Q5TF58 517 aa22.57■■□□□ 1.2
TNFSF13-205ENST00000396545 NBPF26B4DH59 902 aa22.56■■□□□ 1.2
TNFSF13-205ENST00000396545 NPHP1O15259 732 aa22.56■■□□□ 1.2
TNFSF13-205ENST00000396545 GOLGA2Q08379 1002 aa22.56■■□□□ 1.2
TNFSF13-205ENST00000396545 CCDC27Q2M243 656 aa22.56■■□□□ 1.2
TNFSF13-205ENST00000396545 NBPF10Q6P3W6 841 aaKnown RBP22.56■■□□□ 1.2
TNFSF13-205ENST00000396545 NBPF15Q8N660 670 aa22.56■■□□□ 1.2
TNFSF13-205ENST00000396545 MAPK8IP3Q9UPT6 1336 aa22.56■■□□□ 1.2
TNFSF13-205ENST00000396545 SRGNP10124 158 aa22.55■■□□□ 1.2
TNFSF13-205ENST00000396545 TAF7Q15545 349 aaPredicted RBP22.55■■□□□ 1.2
TNFSF13-205ENST00000396545 STYK1Q6J9G0 422 aa22.55■■□□□ 1.2
TNFSF13-205ENST00000396545 PLEKHF1Q96S99 279 aa22.55■■□□□ 1.2
TNFSF13-205ENST00000396545 RGL2O15211 777 aa22.55■■□□□ 1.2
TNFSF13-205ENST00000396545 DUSP27Q5VZP5 1158 aa22.55■■□□□ 1.2
TNFSF13-205ENST00000396545 TRMT2AQ8IZ69 625 aaKnown RBP22.55■■□□□ 1.2
TNFSF13-205ENST00000396545 ZNF652Q9Y2D9 606 aa22.55■■□□□ 1.2
TNFSF13-205ENST00000396545 ARFGEF2Q9Y6D5 1785 aa22.54■■□□□ 1.2
TNFSF13-205ENST00000396545 SLX4Q8IY92 1834 aa22.54■■□□□ 1.2
TNFSF13-205ENST00000396545 VEGFAP15692 232 aaPredicted RBP22.54■■□□□ 1.2
TNFSF13-205ENST00000396545 RRP1P56182 461 aaKnown RBP22.54■■□□□ 1.2
TNFSF13-205ENST00000396545 NBPF5PQ86XG9 351 aaPredicted RBP22.54■■□□□ 1.2
TNFSF13-205ENST00000396545 SMC1BQ8NDV3 1235 aa22.54■■□□□ 1.2
TNFSF13-205ENST00000396545 CNKSR1Q969H4 720 aa22.54■■□□□ 1.2
TNFSF13-205ENST00000396545 ZNF219Q9P2Y4 722 aaPredicted RBP22.54■■□□□ 1.2
TNFSF13-205ENST00000396545 LTBP3Q9NS15 1303 aa22.54■■□□□ 1.2
TNFSF13-205ENST00000396545 LAMB4A4D0S4 1761 aa22.53■■□□□ 1.2
TNFSF13-205ENST00000396545 SLFN5Q08AF3 891 aa22.53■■□□□ 1.2
TNFSF13-205ENST00000396545 PRPF40BQ6NWY9 871 aaKnown RBP22.53■■□□□ 1.2
TNFSF13-205ENST00000396545 MASTLQ96GX5 879 aa22.53■■□□□ 1.2
TNFSF13-205ENST00000396545 PCNTO95613 3336 aa22.53■■□□□ 1.2
TNFSF13-205ENST00000396545 DLG5Q8TDM6 1919 aa22.52■■□□□ 1.2
TNFSF13-205ENST00000396545 DICER1Q9UPY3 1922 aaKnown RBP22.52■■□□□ 1.2
TNFSF13-205ENST00000396545 HTRA3P83110 453 aa22.52■■□□□ 1.2
TNFSF13-205ENST00000396545 MIS18AQ9NYP9 233 aa22.52■■□□□ 1.2
TNFSF13-205ENST00000396545 TAOK3Q9H2K8 898 aa22.51■■□□□ 1.19
TNFSF13-205ENST00000396545 KDM3BQ7LBC6 1761 aa22.51■■□□□ 1.19
TNFSF13-205ENST00000396545 CACNA1SQ13698 1873 aa22.5■■□□□ 1.19
TNFSF13-205ENST00000396545 ERFEQ4G0M1 354 aa22.5■■□□□ 1.19
TNFSF13-205ENST00000396545 NIP7Q9Y221 180 aaKnown RBP eCLIP22.5■■□□□ 1.19
TNFSF13-205ENST00000396545 KLRG2A4D1S0 409 aaPredicted RBP22.49■■□□□ 1.19
TNFSF13-205ENST00000396545 POTECB2RU33 542 aa22.49■■□□□ 1.19
TNFSF13-205ENST00000396545 SOGA3Q5TF21 947 aa22.49■■□□□ 1.19
TNFSF13-205ENST00000396545 WDR63Q8IWG1 891 aa22.49■■□□□ 1.19
TNFSF13-205ENST00000396545 KLRG1Q96E93 195 aa22.49■■□□□ 1.19
TNFSF13-205ENST00000396545 DPY19L2Q6NUT2 758 aa22.48■■□□□ 1.19
TNFSF13-205ENST00000396545 C7orf43Q8WVR3 580 aa22.48■■□□□ 1.19
TNFSF13-205ENST00000396545 TMPOP42166 694 aaKnown RBP22.47■■□□□ 1.19
TNFSF13-205ENST00000396545 NFE2L2Q16236 605 aa22.47■■□□□ 1.19
TNFSF13-205ENST00000396545 HLFQ16534 295 aa22.47■■□□□ 1.19
TNFSF13-205ENST00000396545 TPTE2Q6XPS3 522 aa22.47■■□□□ 1.19
TNFSF13-205ENST00000396545 WWC1Q8IX03 1113 aa22.47■■□□□ 1.19
TNFSF13-205ENST00000396545 E9PSI1 815 aa22.46■■□□□ 1.19
TNFSF13-205ENST00000396545 NPR1P16066 1061 aa22.46■■□□□ 1.19
TNFSF13-205ENST00000396545 EIF4A1P60842 406 aaKnown RBP22.46■■□□□ 1.19
TNFSF13-205ENST00000396545 JMYQ8N9B5 988 aa22.46■■□□□ 1.19
TNFSF13-205ENST00000396545 THUMPD2Q9BTF0 503 aaKnown RBP22.46■■□□□ 1.19
TNFSF13-205ENST00000396545 CCDC93Q567U6 631 aa22.43■■□□□ 1.18
TNFSF13-205ENST00000396545 SPINK5Q9NQ38 1064 aaPredicted RBP22.43■■□□□ 1.18
TNFSF13-205ENST00000396545 FAM177BA6PVY3 158 aa22.42■■□□□ 1.18
TNFSF13-205ENST00000396545 ERVV-1B6SEH8 477 aa22.42■■□□□ 1.18
TNFSF13-205ENST00000396545 LMOD3Q0VAK6 560 aa22.42■■□□□ 1.18
TNFSF13-205ENST00000396545 MAP3K15Q6ZN16 1313 aa22.41■■□□□ 1.18
TNFSF13-205ENST00000396545 NEUROD2Q15784 382 aa22.41■■□□□ 1.18
TNFSF13-205ENST00000396545 NUP98P52948 1817 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms