RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 BOLA2Q9H3K6 86 aa13.93□□□□□ -0.18
PDXDC1-202ENST00000396410 SMC3Q9UQE7 1217 aa13.93□□□□□ -0.18
PDXDC1-202ENST00000396410 EVI5LQ96CN4 794 aa13.93□□□□□ -0.18
PDXDC1-202ENST00000396410 ZNF496Q96IT1 587 aaPredicted RBP13.93□□□□□ -0.18
PDXDC1-202ENST00000396410 ATP5J2-PTCD1G3V325 749 aa13.92□□□□□ -0.18
PDXDC1-202ENST00000396410 PTCD1O75127 700 aaKnown RBP13.92□□□□□ -0.18
PDXDC1-202ENST00000396410 CASTP20810 708 aaKnown RBP13.92□□□□□ -0.18
PDXDC1-202ENST00000396410 ADCY9O60503 1353 aa13.92□□□□□ -0.18
PDXDC1-202ENST00000396410 SYAP1Q96A49 352 aaPredicted RBP13.92□□□□□ -0.18
PDXDC1-202ENST00000396410 KLHL40Q2TBA0 621 aa13.92□□□□□ -0.18
PDXDC1-202ENST00000396410 RNF20Q5VTR2 975 aa13.92□□□□□ -0.18
PDXDC1-202ENST00000396410 PRPF40BQ6NWY9 871 aaKnown RBP13.92□□□□□ -0.18
PDXDC1-202ENST00000396410 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.92□□□□□ -0.18
PDXDC1-202ENST00000396410 DDIT3P35638 169 aa13.91□□□□□ -0.18
PDXDC1-202ENST00000396410 JAKMIP1Q96N16 626 aaKnown RBP13.91□□□□□ -0.18
PDXDC1-202ENST00000396410 PANK2Q9BZ23 570 aa13.91□□□□□ -0.18
PDXDC1-202ENST00000396410 LTN1O94822 1766 aa13.91□□□□□ -0.18
PDXDC1-202ENST00000396410 UBE3BQ7Z3V4 1068 aa13.91□□□□□ -0.18
PDXDC1-202ENST00000396410 A0A087WZG4 1122 aa13.91□□□□□ -0.18
PDXDC1-202ENST00000396410 SGSM2O43147 1006 aa13.91□□□□□ -0.18
PDXDC1-202ENST00000396410 FAM43AQ8N2R8 423 aa13.91□□□□□ -0.18
PDXDC1-202ENST00000396410 NEUROD6Q96NK8 337 aa13.91□□□□□ -0.18
PDXDC1-202ENST00000396410 CYP46A1Q9Y6A2 500 aa13.91□□□□□ -0.18
PDXDC1-202ENST00000396410 PKP1Q13835 747 aa13.91□□□□□ -0.18
PDXDC1-202ENST00000396410 DNAJC2Q99543 621 aaKnown RBP13.91□□□□□ -0.18
PDXDC1-202ENST00000396410 LARP6Q9BRS8 491 aaKnown RBP13.91□□□□□ -0.18
PDXDC1-202ENST00000396410 NWD1Q149M9 1564 aa13.9□□□□□ -0.18
PDXDC1-202ENST00000396410 NASPP49321 788 aaPredicted RBP13.9□□□□□ -0.18
PDXDC1-202ENST00000396410 CHD2O14647 1828 aaKnown RBP13.9□□□□□ -0.18
PDXDC1-202ENST00000396410 NFAT5O94916 1531 aa13.9□□□□□ -0.18
PDXDC1-202ENST00000396410 KLHDC4Q8TBB5 520 aa13.89□□□□□ -0.19
PDXDC1-202ENST00000396410 PI4K2BQ8TCG2 481 aa13.89□□□□□ -0.19
PDXDC1-202ENST00000396410 METTL22Q9BUU2 404 aaPredicted RBP13.89□□□□□ -0.19
PDXDC1-202ENST00000396410 PDRG1Q9NUG6 133 aa13.89□□□□□ -0.19
PDXDC1-202ENST00000396410 WDR33Q9C0J8 1336 aaKnown RBP13.89□□□□□ -0.19
PDXDC1-202ENST00000396410 USP16Q9Y5T5 823 aa13.89□□□□□ -0.19
PDXDC1-202ENST00000396410 PXDNQ92626 1479 aa13.89□□□□□ -0.19
PDXDC1-202ENST00000396410 HSPA4P34932 840 aa13.89□□□□□ -0.19
PDXDC1-202ENST00000396410 TAF7LQ5H9L4 462 aa13.89□□□□□ -0.19
PDXDC1-202ENST00000396410 GORABQ5T7V8 394 aa13.89□□□□□ -0.19
PDXDC1-202ENST00000396410 PSMA5P28066 241 aa13.89□□□□□ -0.19
PDXDC1-202ENST00000396410 ZCRB1Q8TBF4 217 aaKnown RBP13.89□□□□□ -0.19
PDXDC1-202ENST00000396410 ATP6V1DQ9Y5K8 247 aa13.89□□□□□ -0.19
PDXDC1-202ENST00000396410 SALL3Q9BXA9 1300 aa13.88□□□□□ -0.19
PDXDC1-202ENST00000396410 RAD50Q92878 1312 aa13.88□□□□□ -0.19
PDXDC1-202ENST00000396410 MBD3O95983 291 aa13.88□□□□□ -0.19
PDXDC1-202ENST00000396410 GCKRQ14397 625 aa13.88□□□□□ -0.19
PDXDC1-202ENST00000396410 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.88□□□□□ -0.191e-7■■■□□ 14.6
PDXDC1-202ENST00000396410 NEURL1BA8MQ27 555 aa13.88□□□□□ -0.19
PDXDC1-202ENST00000396410 LIMCH1Q9UPQ0 1083 aa13.88□□□□□ -0.19
PDXDC1-202ENST00000396410 NAP1L2Q9ULW6 460 aaPredicted RBP13.87□□□□□ -0.19
PDXDC1-202ENST00000396410 HSP90B1P14625 803 aaKnown RBP13.87□□□□□ -0.19
PDXDC1-202ENST00000396410 SNX14Q9Y5W7 946 aa13.87□□□□□ -0.19
PDXDC1-202ENST00000396410 INTS4Q96HW7 963 aaKnown RBP13.87□□□□□ -0.19
PDXDC1-202ENST00000396410 VPS37CA5D8V6 355 aaPredicted RBP13.86□□□□□ -0.19
PDXDC1-202ENST00000396410 EPB41L2O43491 1005 aaKnown RBP13.86□□□□□ -0.19
PDXDC1-202ENST00000396410 MTX1Q13505 466 aa13.86□□□□□ -0.19
PDXDC1-202ENST00000396410 FSD2A1L4K1 749 aa13.86□□□□□ -0.19
PDXDC1-202ENST00000396410 CCDC83Q8IWF9 413 aa13.85□□□□□ -0.19
PDXDC1-202ENST00000396410 ZBTB3Q9H5J0 574 aa13.85□□□□□ -0.19
PDXDC1-202ENST00000396410 FAM208AQ9UK61 1670 aaKnown RBP13.85□□□□□ -0.19
PDXDC1-202ENST00000396410 PHF14O94880 888 aa13.85□□□□□ -0.19
PDXDC1-202ENST00000396410 AK2P54819 239 aa13.85□□□□□ -0.19
PDXDC1-202ENST00000396410 NMIQ13287 307 aaPredicted RBP13.85□□□□□ -0.19
PDXDC1-202ENST00000396410 EAF2Q96CJ1 260 aaPredicted RBP13.85□□□□□ -0.19
PDXDC1-202ENST00000396410 PTMAP06454 111 aaKnown RBP13.85□□□□□ -0.19
PDXDC1-202ENST00000396410 CSPP1Q1MSJ5 1256 aa13.85□□□□□ -0.19
PDXDC1-202ENST00000396410 CYP27B1O15528 508 aa13.84□□□□□ -0.19
PDXDC1-202ENST00000396410 CPA1P15085 419 aa13.84□□□□□ -0.19
PDXDC1-202ENST00000396410 ZSCAN31Q96LW9 406 aaPredicted RBP13.84□□□□□ -0.19
PDXDC1-202ENST00000396410 RBM27Q9P2N5 1060 aaKnown RBP13.84□□□□□ -0.19
PDXDC1-202ENST00000396410 PCDH11XQ9BZA7 1347 aa13.84□□□□□ -0.19
PDXDC1-202ENST00000396410 PCDH11YQ9BZA8 1340 aa13.84□□□□□ -0.19
PDXDC1-202ENST00000396410 GOLGA6L4A6NEF3 574 aa13.84□□□□□ -0.19
PDXDC1-202ENST00000396410 IGKV5-2P06315 115 aa13.84□□□□□ -0.19
PDXDC1-202ENST00000396410 MSNP26038 577 aaKnown RBP13.84□□□□□ -0.19
PDXDC1-202ENST00000396410 ZSCAN23Q3MJ62 389 aa13.84□□□□□ -0.19
PDXDC1-202ENST00000396410 BLOC1S2Q6QNY1 142 aa13.84□□□□□ -0.19
PDXDC1-202ENST00000396410 NAP1L5Q96NT1 182 aaPredicted RBP13.84□□□□□ -0.19
PDXDC1-202ENST00000396410 LSG1Q9H089 658 aaKnown RBP13.84□□□□□ -0.19
PDXDC1-202ENST00000396410 RBM8AQ9Y5S9 174 aaKnown RBP13.84□□□□□ -0.19
PDXDC1-202ENST00000396410 LMBR1LQ6UX01 489 aa13.84□□□□□ -0.19
PDXDC1-202ENST00000396410 SYTL4Q96C24 671 aaPredicted RBP13.84□□□□□ -0.19
PDXDC1-202ENST00000396410 LMBRD1Q9NUN5 540 aa13.84□□□□□ -0.19
PDXDC1-202ENST00000396410 LRRC37A3O60309 1634 aa13.84□□□□□ -0.19
PDXDC1-202ENST00000396410 CWC25Q9NXE8 425 aaPredicted RBP13.83□□□□□ -0.19
PDXDC1-202ENST00000396410 TFCP2Q12800 502 aa13.83□□□□□ -0.2
PDXDC1-202ENST00000396410 GDPD2Q9HCC8 539 aa13.83□□□□□ -0.2
PDXDC1-202ENST00000396410 IL2RBP14784 551 aa13.83□□□□□ -0.2
PDXDC1-202ENST00000396410 PLBD2Q8NHP8 589 aa13.83□□□□□ -0.2
PDXDC1-202ENST00000396410 FAM227BQ96M60 508 aa13.83□□□□□ -0.2
PDXDC1-202ENST00000396410 TMOD3Q9NYL9 352 aa13.83□□□□□ -0.2
PDXDC1-202ENST00000396410 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.83□□□□□ -0.2
PDXDC1-202ENST00000396410 OVOS2A0A0G2JMS6 1433 aa13.83□□□□□ -0.2
PDXDC1-202ENST00000396410 SPATA31A3Q5VYP0 1347 aa13.83□□□□□ -0.2
PDXDC1-202ENST00000396410 SYCE3A1L190 88 aa13.83□□□□□ -0.2
PDXDC1-202ENST00000396410 CCDC171Q6TFL3 1326 aa13.82□□□□□ -0.2
PDXDC1-202ENST00000396410 CACNA1FO60840 1977 aa13.82□□□□□ -0.2
PDXDC1-202ENST00000396410 SASH1O94885 1247 aa13.82□□□□□ -0.2
PDXDC1-202ENST00000396410 CCDC173Q0VFZ6 552 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms