RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 PXDNQ92626 1479 aa18.9■□□□□ 0.62
HOXA3-202ENST00000396352 CHD2O14647 1828 aaKnown RBP18.89■□□□□ 0.62
HOXA3-202ENST00000396352 BTBD11A6QL63 1104 aa18.89■□□□□ 0.62
HOXA3-202ENST00000396352 CCDC183Q5T5S1 534 aa18.89■□□□□ 0.62
HOXA3-202ENST00000396352 PHF8Q9UPP1 1060 aa18.89■□□□□ 0.62
HOXA3-202ENST00000396352 F13A1P00488 732 aa18.89■□□□□ 0.61
HOXA3-202ENST00000396352 CHMP4AQ9BY43 222 aa18.89■□□□□ 0.61
HOXA3-202ENST00000396352 AKAP4Q5JQC9 854 aa18.89■□□□□ 0.61
HOXA3-202ENST00000396352 KCNB2Q92953 911 aa18.89■□□□□ 0.61
HOXA3-202ENST00000396352 DIAPH3Q9NSV4 1193 aa18.89■□□□□ 0.61
HOXA3-202ENST00000396352 SIPA1L3O60292 1781 aaPredicted RBP18.88■□□□□ 0.61
HOXA3-202ENST00000396352 OS9Q13438 667 aaPredicted RBP18.88■□□□□ 0.61
HOXA3-202ENST00000396352 ADCK5Q3MIX3 580 aa18.88■□□□□ 0.61
HOXA3-202ENST00000396352 FAM184AQ8NB25 1140 aa18.88■□□□□ 0.61
HOXA3-202ENST00000396352 ADGRL3Q9HAR2 1447 aa18.88■□□□□ 0.61
HOXA3-202ENST00000396352 CSPP1Q1MSJ5 1256 aa18.88■□□□□ 0.61
HOXA3-202ENST00000396352 SMC3Q9UQE7 1217 aa18.88■□□□□ 0.61
HOXA3-202ENST00000396352 UBE2HP62256 183 aa18.87■□□□□ 0.61
HOXA3-202ENST00000396352 TEFQ10587 303 aa18.87■□□□□ 0.61
HOXA3-202ENST00000396352 CLASRPQ8N2M8 674 aaKnown RBP18.87■□□□□ 0.61
HOXA3-202ENST00000396352 ECHDC1Q9NTX5 307 aa18.87■□□□□ 0.61
HOXA3-202ENST00000396352 DBF4Q9UBU7 674 aaPredicted RBP18.87■□□□□ 0.61
HOXA3-202ENST00000396352 ZNF530Q6P9A1 599 aaPredicted RBP18.87■□□□□ 0.61
HOXA3-202ENST00000396352 MPRIPQ6WCQ1 1025 aa18.87■□□□□ 0.61
HOXA3-202ENST00000396352 MAP3K2Q9Y2U5 619 aa18.87■□□□□ 0.61
HOXA3-202ENST00000396352 PROSER3Q2NL68 480 aa18.87■□□□□ 0.61
HOXA3-202ENST00000396352 UVSSAQ2YD98 709 aa18.87■□□□□ 0.61
HOXA3-202ENST00000396352 VPS53Q5VIR6 699 aa18.87■□□□□ 0.61
HOXA3-202ENST00000396352 LRRC59Q96AG4 307 aaKnown RBP18.87■□□□□ 0.61
HOXA3-202ENST00000396352 NCAPD2Q15021 1401 aa18.86■□□□□ 0.61
HOXA3-202ENST00000396352 RUFY2Q8WXA3 655 aa18.86■□□□□ 0.61
HOXA3-202ENST00000396352 ZSWIM6Q9HCJ5 1215 aa18.86■□□□□ 0.61
HOXA3-202ENST00000396352 HEG1Q9ULI3 1381 aa18.86■□□□□ 0.61
HOXA3-202ENST00000396352 PA2G4Q9UQ80 394 aaKnown RBP18.86■□□□□ 0.61
HOXA3-202ENST00000396352 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.86■□□□□ 0.61
HOXA3-202ENST00000396352 ALDH1L1O75891 902 aa18.86■□□□□ 0.61
HOXA3-202ENST00000396352 ST3GAL1Q11201 340 aa18.86■□□□□ 0.61
HOXA3-202ENST00000396352 GLIPR1L2Q4G1C9 344 aa18.85■□□□□ 0.61
HOXA3-202ENST00000396352 PRPF40BQ6NWY9 871 aaKnown RBP18.85■□□□□ 0.61
HOXA3-202ENST00000396352 JAKMIP1Q96N16 626 aaKnown RBP18.85■□□□□ 0.61
HOXA3-202ENST00000396352 TM6SF1Q9BZW5 370 aa18.85■□□□□ 0.61
HOXA3-202ENST00000396352 OVOS2A0A0G2JMS6 1433 aa18.85■□□□□ 0.61
HOXA3-202ENST00000396352 CCDC83Q8IWF9 413 aa18.85■□□□□ 0.61
HOXA3-202ENST00000396352 GJB2P29033 226 aa18.85■□□□□ 0.61
HOXA3-202ENST00000396352 NECTIN1Q15223 517 aa18.85■□□□□ 0.61
HOXA3-202ENST00000396352 PDCL3Q9H2J4 239 aa18.85■□□□□ 0.61
HOXA3-202ENST00000396352 PDRG1Q9NUG6 133 aa18.85■□□□□ 0.61
HOXA3-202ENST00000396352 MTMR6Q9Y217 621 aa18.84■□□□□ 0.61
HOXA3-202ENST00000396352 RNMTO43148 476 aaKnown RBP18.84■□□□□ 0.61
HOXA3-202ENST00000396352 FIBPO43427 364 aa18.84■□□□□ 0.61
HOXA3-202ENST00000396352 GIGYF1O75420 1035 aaPredicted RBP18.84■□□□□ 0.61
HOXA3-202ENST00000396352 CWF19L2Q2TBE0 894 aaKnown RBP18.84■□□□□ 0.61
HOXA3-202ENST00000396352 KSR2Q6VAB6 950 aa18.84■□□□□ 0.61
HOXA3-202ENST00000396352 C9orf78Q9NZ63 289 aaPredicted RBP18.84■□□□□ 0.61
HOXA3-202ENST00000396352 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.84■□□□□ 0.61
HOXA3-202ENST00000396352 CAMTA1Q9Y6Y1 1673 aa18.84■□□□□ 0.61
HOXA3-202ENST00000396352 LETM1O95202 739 aaPredicted RBP18.84■□□□□ 0.61
HOXA3-202ENST00000396352 PTMAP06454 111 aaKnown RBP18.84■□□□□ 0.61
HOXA3-202ENST00000396352 ERC1Q8IUD2 1116 aa18.84■□□□□ 0.61
HOXA3-202ENST00000396352 USP25Q9UHP3 1055 aa18.84■□□□□ 0.61
HOXA3-202ENST00000396352 ATP6V1DQ9Y5K8 247 aa18.84■□□□□ 0.61
HOXA3-202ENST00000396352 CCDC171Q6TFL3 1326 aa18.83■□□□□ 0.61
HOXA3-202ENST00000396352 DTNBO60941 627 aa18.83■□□□□ 0.61
HOXA3-202ENST00000396352 PLEKHO1Q53GL0 409 aaPredicted RBP18.83■□□□□ 0.61
HOXA3-202ENST00000396352 EVI5LQ96CN4 794 aa18.83■□□□□ 0.61
HOXA3-202ENST00000396352 FUCA2Q9BTY2 467 aa18.83■□□□□ 0.61
HOXA3-202ENST00000396352 IFIT2P09913 472 aaKnown RBP18.83■□□□□ 0.6
HOXA3-202ENST00000396352 HCLS1P14317 486 aaPredicted RBP18.83■□□□□ 0.6
HOXA3-202ENST00000396352 GPATCH3Q96I76 525 aa18.83■□□□□ 0.6
HOXA3-202ENST00000396352 UQCRHLA0A096LP55 91 aa18.82■□□□□ 0.6
HOXA3-202ENST00000396352 PRAMEF22A3QJZ6 481 aa18.82■□□□□ 0.6
HOXA3-202ENST00000396352 UQCRHP07919 91 aa18.82■□□□□ 0.6
HOXA3-202ENST00000396352 KAZALD1Q96I82 304 aa18.82■□□□□ 0.6
HOXA3-202ENST00000396352 SH2B1Q9NRF2 756 aaPredicted RBP18.82■□□□□ 0.6
HOXA3-202ENST00000396352 CYP46A1Q9Y6A2 500 aa18.82■□□□□ 0.6
HOXA3-202ENST00000396352 ADAMTS7Q9UKP4 1686 aa18.82■□□□□ 0.6
HOXA3-202ENST00000396352 KCNH5Q8NCM2 988 aa18.82■□□□□ 0.6
HOXA3-202ENST00000396352 ZSCAN31Q96LW9 406 aaPredicted RBP18.82■□□□□ 0.6
HOXA3-202ENST00000396352 DNM1Q05193 864 aaKnown RBP18.82■□□□□ 0.6
HOXA3-202ENST00000396352 KIAA2012Q0VF49 1180 aa18.82■□□□□ 0.6
HOXA3-202ENST00000396352 ME3Q16798 604 aa18.82■□□□□ 0.6
HOXA3-202ENST00000396352 AACSQ86V21 672 aa18.82■□□□□ 0.6
HOXA3-202ENST00000396352 ZBTB7CA1YPR0 619 aa18.81■□□□□ 0.6
HOXA3-202ENST00000396352 AMOTQ4VCS5 1084 aa18.81■□□□□ 0.6
HOXA3-202ENST00000396352 UTYO14607 1347 aa18.81■□□□□ 0.6
HOXA3-202ENST00000396352 SASH1O94885 1247 aa18.81■□□□□ 0.6
HOXA3-202ENST00000396352 TPRNQ4KMQ1 711 aa18.81■□□□□ 0.6
HOXA3-202ENST00000396352 FAM227BQ96M60 508 aa18.8■□□□□ 0.6
HOXA3-202ENST00000396352 SNRKQ9NRH2 765 aa18.8■□□□□ 0.6
HOXA3-202ENST00000396352 RBM8AQ9Y5S9 174 aaKnown RBP18.8■□□□□ 0.6
HOXA3-202ENST00000396352 ADCY5O95622 1261 aa18.8■□□□□ 0.6
HOXA3-202ENST00000396352 RBM10P98175 930 aaKnown RBP18.8■□□□□ 0.6
HOXA3-202ENST00000396352 COL9A3Q14050 684 aaPredicted RBP18.8■□□□□ 0.6
HOXA3-202ENST00000396352 SUCLG2Q96I99 432 aa18.8■□□□□ 0.6
HOXA3-202ENST00000396352 CREB3L3Q68CJ9 461 aa18.8■□□□□ 0.6
HOXA3-202ENST00000396352 MAP4K1Q92918 833 aa18.8■□□□□ 0.6
HOXA3-202ENST00000396352 SLIT3O75094 1523 aa18.79■□□□□ 0.6
HOXA3-202ENST00000396352 SASS6Q6UVJ0 657 aa18.79■□□□□ 0.6
HOXA3-202ENST00000396352 KLHL34Q8N239 644 aa18.79■□□□□ 0.6
HOXA3-202ENST00000396352 DDX54Q8TDD1 881 aaKnown RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms