RNA–Protein interactions for RNA: ENST00000395980.6

BDNF-204, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-204ENST00000395980 KCNF1Q9H3M0 494 aa10.38□□□□□ -0.75
BDNF-204ENST00000395980 BCL2L12Q9HB09 334 aa10.38□□□□□ -0.75
BDNF-204ENST00000395980 PDRG1Q9NUG6 133 aa10.38□□□□□ -0.75
BDNF-204ENST00000395980 DIP2BQ9P265 1576 aa10.38□□□□□ -0.75
BDNF-204ENST00000395980 CTIFO43310 598 aaKnown RBP10.37□□□□□ -0.75
BDNF-204ENST00000395980 SYCP1Q15431 976 aa10.37□□□□□ -0.75
BDNF-204ENST00000395980 ANKRD7Q92527 254 aa10.37□□□□□ -0.75
BDNF-204ENST00000395980 CYP46A1Q9Y6A2 500 aa10.37□□□□□ -0.75
BDNF-204ENST00000395980 DNM1Q05193 864 aaKnown RBP10.37□□□□□ -0.75
BDNF-204ENST00000395980 MTX1Q13505 466 aa10.37□□□□□ -0.75
BDNF-204ENST00000395980 MED1Q15648 1581 aaPredicted RBP10.37□□□□□ -0.75
BDNF-204ENST00000395980 PLEKHG1Q9ULL1 1385 aa10.37□□□□□ -0.75
BDNF-204ENST00000395980 ZSCAN20P17040 1043 aaPredicted RBP10.37□□□□□ -0.75
BDNF-204ENST00000395980 PDCP20941 246 aa10.37□□□□□ -0.75
BDNF-204ENST00000395980 AMPHP49418 695 aa10.37□□□□□ -0.75
BDNF-204ENST00000395980 KRT85P78386 507 aa10.37□□□□□ -0.75
BDNF-204ENST00000395980 HDGFL1Q5TGJ6 251 aa10.37□□□□□ -0.75
BDNF-204ENST00000395980 PIK3C2AO00443 1686 aa10.37□□□□□ -0.75
BDNF-204ENST00000395980 SRGAP3O43295 1099 aa10.36□□□□□ -0.75
BDNF-204ENST00000395980 CCDC83Q8IWF9 413 aa10.36□□□□□ -0.75
BDNF-204ENST00000395980 AP5Z1O43299 807 aa10.36□□□□□ -0.75
BDNF-204ENST00000395980 LARGE1O95461 756 aa10.36□□□□□ -0.75
BDNF-204ENST00000395980 MAP3K11Q16584 847 aa10.36□□□□□ -0.75
BDNF-204ENST00000395980 C17orf53Q8N3J3 647 aaPredicted RBP10.36□□□□□ -0.75
BDNF-204ENST00000395980 PYCARDQ9ULZ3 195 aa10.36□□□□□ -0.75
BDNF-204ENST00000395980 TNRQ92752 1358 aa10.36□□□□□ -0.75
BDNF-204ENST00000395980 CWC27Q6UX04 472 aaKnown RBP10.36□□□□□ -0.75
BDNF-204ENST00000395980 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.36□□□□□ -0.75
BDNF-204ENST00000395980 GPATCH3Q96I76 525 aa10.36□□□□□ -0.75
BDNF-204ENST00000395980 JAKMIP1Q96N16 626 aaKnown RBP10.36□□□□□ -0.75
BDNF-204ENST00000395980 NUP62CLQ9H1M0 184 aa10.36□□□□□ -0.75
BDNF-204ENST00000395980 PDCL2Q8N4E4 241 aa10.36□□□□□ -0.75
BDNF-204ENST00000395980 MPNDQ8N594 471 aa10.36□□□□□ -0.75
BDNF-204ENST00000395980 IL17REQ8NFR9 667 aa10.36□□□□□ -0.75
BDNF-204ENST00000395980 HIP1O00291 1037 aa10.35□□□□□ -0.75
BDNF-204ENST00000395980 MAP4K4O95819 1239 aaPredicted RBP10.35□□□□□ -0.75
BDNF-204ENST00000395980 RBM43Q6ZSC3 357 aaKnown RBP10.35□□□□□ -0.75
BDNF-204ENST00000395980 ALDH8A1Q9H2A2 487 aaPredicted RBP10.35□□□□□ -0.75
BDNF-204ENST00000395980 SNRKQ9NRH2 765 aa10.35□□□□□ -0.75
BDNF-204ENST00000395980 ZKSCAN1P17029 563 aaPredicted RBP10.35□□□□□ -0.75
BDNF-204ENST00000395980 ERC1Q8IUD2 1116 aa10.35□□□□□ -0.75
BDNF-204ENST00000395980 DDX19AQ9NUU7 478 aaKnown RBP10.35□□□□□ -0.75
BDNF-204ENST00000395980 HDAC5Q9UQL6 1122 aa10.35□□□□□ -0.75
BDNF-204ENST00000395980 KDM3BQ7LBC6 1761 aa10.35□□□□□ -0.75
BDNF-204ENST00000395980 RIOK3O14730 519 aaKnown RBP10.35□□□□□ -0.75
BDNF-204ENST00000395980 ST3GAL1Q11201 340 aa10.35□□□□□ -0.75
BDNF-204ENST00000395980 NECTIN1Q15223 517 aa10.35□□□□□ -0.75
BDNF-204ENST00000395980 PPP4R3BQ5MIZ7 849 aa10.35□□□□□ -0.75
BDNF-204ENST00000395980 BEND3Q5T5X7 828 aa10.35□□□□□ -0.75
BDNF-204ENST00000395980 SCAND2PQ9GZW5 306 aaPredicted RBP10.35□□□□□ -0.75
BDNF-204ENST00000395980 ECHDC1Q9NTX5 307 aa10.35□□□□□ -0.75
BDNF-204ENST00000395980 SPG7Q9UQ90 795 aa10.35□□□□□ -0.75
BDNF-204ENST00000395980 CEMIPQ8WUJ3 1361 aa10.35□□□□□ -0.75
BDNF-204ENST00000395980 CAVIN2O95810 425 aa10.34□□□□□ -0.75
BDNF-204ENST00000395980 PSMA5P28066 241 aa10.34□□□□□ -0.75
BDNF-204ENST00000395980 TYRO3Q06418 890 aa10.34□□□□□ -0.75
BDNF-204ENST00000395980 CLASRPQ8N2M8 674 aaKnown RBP10.34□□□□□ -0.75
BDNF-204ENST00000395980 DNAAF4Q8WXU2 420 aa10.34□□□□□ -0.75
BDNF-204ENST00000395980 EVI5LQ96CN4 794 aa10.34□□□□□ -0.75
BDNF-204ENST00000395980 FEZ1Q99689 392 aa10.34□□□□□ -0.75
BDNF-204ENST00000395980 KIF20AO95235 890 aa10.34□□□□□ -0.75
BDNF-204ENST00000395980 ANKRD1Q15327 319 aa10.34□□□□□ -0.75
BDNF-204ENST00000395980 TTC6Q86TZ1 520 aa10.34□□□□□ -0.75
BDNF-204ENST00000395980 TSC1Q92574 1164 aa10.34□□□□□ -0.75
BDNF-204ENST00000395980 NECTIN2Q92692 538 aa10.34□□□□□ -0.75
BDNF-204ENST00000395980 MRVI1Q9Y6F6 885 aa10.34□□□□□ -0.75
BDNF-204ENST00000395980 NPHP3Q7Z494 1330 aa10.34□□□□□ -0.75
BDNF-204ENST00000395980 VPS37CA5D8V6 355 aaPredicted RBP10.34□□□□□ -0.75
BDNF-204ENST00000395980 PLCB2Q00722 1185 aa10.34□□□□□ -0.75
BDNF-204ENST00000395980 ME3Q16798 604 aa10.34□□□□□ -0.75
BDNF-204ENST00000395980 PTH1RQ03431 593 aa10.33□□□□□ -0.76
BDNF-204ENST00000395980 PRPF40BQ6NWY9 871 aaKnown RBP10.33□□□□□ -0.76
BDNF-204ENST00000395980 ARID3AQ99856 593 aa10.33□□□□□ -0.76
BDNF-204ENST00000395980 PHAXQ9H814 394 aaKnown RBP10.33□□□□□ -0.76
BDNF-204ENST00000395980 MARF1Q9Y4F3 1742 aaKnown RBP10.33□□□□□ -0.76
BDNF-204ENST00000395980 ADCK5Q3MIX3 580 aa10.33□□□□□ -0.76
BDNF-204ENST00000395980 LARP1BQ659C4 914 aaKnown RBP10.33□□□□□ -0.76
BDNF-204ENST00000395980 TDRD7Q8NHU6 1098 aaKnown RBP10.33□□□□□ -0.76
BDNF-204ENST00000395980 JARID2Q92833 1246 aaPredicted RBP10.33□□□□□ -0.76
BDNF-204ENST00000395980 SMTNL1A8MU46 457 aa10.33□□□□□ -0.76
BDNF-204ENST00000395980 SOX12O15370 315 aa10.33□□□□□ -0.76
BDNF-204ENST00000395980 NBPF7P0C2Y1 421 aaPredicted RBP10.32□□□□□ -0.76
BDNF-204ENST00000395980 CPA1P15085 419 aa10.32□□□□□ -0.76
BDNF-204ENST00000395980 HOXC9P31274 260 aa10.32□□□□□ -0.76
BDNF-204ENST00000395980 PRDM10Q9NQV6 1147 aa10.32□□□□□ -0.76
BDNF-204ENST00000395980 ALDH1L1O75891 902 aa10.32□□□□□ -0.76
BDNF-204ENST00000395980 CDC25BP30305 580 aa10.32□□□□□ -0.76
BDNF-204ENST00000395980 ATP2B3Q16720 1220 aa10.32□□□□□ -0.76
BDNF-204ENST00000395980 CREB3L3Q68CJ9 461 aa10.32□□□□□ -0.76
BDNF-204ENST00000395980 PLA2G4DQ86XP0 818 aa10.32□□□□□ -0.76
BDNF-204ENST00000395980 SPC24Q8NBT2 197 aa10.32□□□□□ -0.76
BDNF-204ENST00000395980 MAP4K1Q92918 833 aa10.32□□□□□ -0.76
BDNF-204ENST00000395980 LARP6Q9BRS8 491 aaKnown RBP10.32□□□□□ -0.76
BDNF-204ENST00000395980 CLSTN2Q9H4D0 955 aa10.32□□□□□ -0.76
BDNF-204ENST00000395980 ANKARQ7Z5J8 1434 aa10.32□□□□□ -0.76
BDNF-204ENST00000395980 GIGYF1O75420 1035 aaPredicted RBP10.32□□□□□ -0.76
BDNF-204ENST00000395980 PTGS1P23219 599 aa10.32□□□□□ -0.76
BDNF-204ENST00000395980 OS9Q13438 667 aaPredicted RBP10.32□□□□□ -0.76
BDNF-204ENST00000395980 TNMDQ9H2S6 317 aa10.32□□□□□ -0.76
BDNF-204ENST00000395980 RBM8AQ9Y5S9 174 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms