RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 NAP1L2Q9ULW6 460 aaPredicted RBP4.03□□□□□ -1.76
VPS13C-203ENST00000395896 ZNF853P0CG23 659 aa4.03□□□□□ -1.76
VPS13C-203ENST00000395896 MSNP26038 577 aaKnown RBP4.03□□□□□ -1.76
VPS13C-203ENST00000395896 ATP8B2P98198 1209 aa4.03□□□□□ -1.76
VPS13C-203ENST00000395896 SF3B2Q13435 895 aaKnown RBP4.03□□□□□ -1.76
VPS13C-203ENST00000395896 TRIM22Q8IYM9 498 aa4.03□□□□□ -1.76
VPS13C-203ENST00000395896 NECTIN2Q92692 538 aa4.03□□□□□ -1.76
VPS13C-203ENST00000395896 NAT10Q9H0A0 1025 aaKnown RBP4.03□□□□□ -1.76
VPS13C-203ENST00000395896 SSH2Q76I76 1423 aa4.03□□□□□ -1.76
VPS13C-203ENST00000395896 GOLGA6L3A6NEY3 463 aa4.03□□□□□ -1.76
VPS13C-203ENST00000395896 K7ELQ4 463 aaPredicted RBP4.03□□□□□ -1.76
VPS13C-203ENST00000395896 APPP05067 770 aa4.03□□□□□ -1.76
VPS13C-203ENST00000395896 TMTC2Q8N394 836 aa4.03□□□□□ -1.76
VPS13C-203ENST00000395896 EXOC6BQ9Y2D4 811 aa4.03□□□□□ -1.76
VPS13C-203ENST00000395896 PTCD1O75127 700 aaKnown RBP4.03□□□□□ -1.76
VPS13C-203ENST00000395896 SF3A1Q15459 793 aaKnown RBP4.03□□□□□ -1.76
VPS13C-203ENST00000395896 THUMPD2Q9BTF0 503 aaKnown RBP4.03□□□□□ -1.76
VPS13C-203ENST00000395896 LRRFIP2Q9Y608 721 aaKnown RBP4.03□□□□□ -1.76
VPS13C-203ENST00000395896 GOLGA4Q13439 2230 aaKnown RBP4.03□□□□□ -1.76
VPS13C-203ENST00000395896 TBC1D32Q96NH3 1257 aa4.03□□□□□ -1.76
VPS13C-203ENST00000395896 ATG3Q9NT62 314 aa4.03□□□□□ -1.76
VPS13C-203ENST00000395896 BAZ2BQ9UIF8 2168 aaKnown RBP4.03□□□□□ -1.76
VPS13C-203ENST00000395896 PTMAP06454 111 aaKnown RBP4.03□□□□□ -1.76
VPS13C-203ENST00000395896 RBM42Q9BTD8 480 aaKnown RBP4.03□□□□□ -1.76
VPS13C-203ENST00000395896 SPATA31A3Q5VYP0 1347 aa4.03□□□□□ -1.76
VPS13C-203ENST00000395896 FAM83GA6ND36 823 aa4.03□□□□□ -1.76
VPS13C-203ENST00000395896 RNMTO43148 476 aaKnown RBP4.03□□□□□ -1.76
VPS13C-203ENST00000395896 XPCQ01831 940 aaPredicted RBP4.03□□□□□ -1.76
VPS13C-203ENST00000395896 AACSQ86V21 672 aa4.03□□□□□ -1.76
VPS13C-203ENST00000395896 C8orf58Q8NAV2 365 aa4.03□□□□□ -1.76
VPS13C-203ENST00000395896 PLBD2Q8NHP8 589 aa4.03□□□□□ -1.76
VPS13C-203ENST00000395896 INTS4Q96HW7 963 aaKnown RBP4.03□□□□□ -1.76
VPS13C-203ENST00000395896 VIRMAQ69YN4 1812 aaKnown RBP4.03□□□□□ -1.76
VPS13C-203ENST00000395896 UQCRFS1P1P0C7P4 283 aa4.03□□□□□ -1.76
VPS13C-203ENST00000395896 WASHC4Q2M389 1173 aa4.03□□□□□ -1.76
VPS13C-203ENST00000395896 SCAND2PQ9GZW5 306 aaPredicted RBP4.03□□□□□ -1.76
VPS13C-203ENST00000395896 NCKAP5LQ9HCH0 1330 aa4.03□□□□□ -1.77
VPS13C-203ENST00000395896 WASF1Q92558 559 aa4.02□□□□□ -1.77
VPS13C-203ENST00000395896 MAP3K2Q9Y2U5 619 aa4.02□□□□□ -1.77
VPS13C-203ENST00000395896 PCDHB15Q9Y5E8 787 aa4.02□□□□□ -1.77
VPS13C-203ENST00000395896 PRR36Q9H6K5 1346 aa4.02□□□□□ -1.77
VPS13C-203ENST00000395896 CCDC152Q4G0S7 254 aa4.02□□□□□ -1.77
VPS13C-203ENST00000395896 TPTE2Q6XPS3 522 aa4.02□□□□□ -1.77
VPS13C-203ENST00000395896 LDHAL6AQ6ZMR3 332 aa4.02□□□□□ -1.77
VPS13C-203ENST00000395896 SNX21Q969T3 373 aa4.02□□□□□ -1.77
VPS13C-203ENST00000395896 ANKRD18BA2A2Z9 1011 aa4.02□□□□□ -1.77
VPS13C-203ENST00000395896 RBM27Q9P2N5 1060 aaKnown RBP4.02□□□□□ -1.77
VPS13C-203ENST00000395896 TNS3Q68CZ2 1445 aa4.02□□□□□ -1.77
VPS13C-203ENST00000395896 GIGYF1O75420 1035 aaPredicted RBP4.02□□□□□ -1.77
VPS13C-203ENST00000395896 TRAF1Q13077 416 aa4.02□□□□□ -1.77
VPS13C-203ENST00000395896 PPP2R5BQ15173 497 aa4.02□□□□□ -1.77
VPS13C-203ENST00000395896 UBAP1LF5GYI3 381 aa4.02□□□□□ -1.77
VPS13C-203ENST00000395896 RHPN1Q8TCX5 695 aa4.02□□□□□ -1.77
VPS13C-203ENST00000395896 PDE1AP54750 535 aa4.02□□□□□ -1.77
VPS13C-203ENST00000395896 NLRP3Q96P20 1036 aa4.02□□□□□ -1.77
VPS13C-203ENST00000395896 GNAT2P19087 354 aa4.02□□□□□ -1.77
VPS13C-203ENST00000395896 GLIPR1L2Q4G1C9 344 aa4.02□□□□□ -1.77
VPS13C-203ENST00000395896 C20orf194Q5TEA3 1177 aa4.02□□□□□ -1.77
VPS13C-203ENST00000395896 CHPF2Q9P2E5 772 aa4.02□□□□□ -1.77
VPS13C-203ENST00000395896 METTL22Q9BUU2 404 aaPredicted RBP4.02□□□□□ -1.77
VPS13C-203ENST00000395896 IMMTQ16891 758 aaKnown RBP4.02□□□□□ -1.77
VPS13C-203ENST00000395896 TTC22Q5TAA0 569 aa4.02□□□□□ -1.77
VPS13C-203ENST00000395896 PXDNLA1KZ92 1463 aa4.02□□□□□ -1.77
VPS13C-203ENST00000395896 GOLGA6L19H0YKK7 550 aa4.02□□□□□ -1.77
VPS13C-203ENST00000395896 KRT85P78386 507 aa4.02□□□□□ -1.77
VPS13C-203ENST00000395896 COPS6Q7L5N1 327 aa4.02□□□□□ -1.77
VPS13C-203ENST00000395896 FLAD1Q8NFF5 587 aa4.02□□□□□ -1.77
VPS13C-203ENST00000395896 ATP10DQ9P241 1426 aa4.02□□□□□ -1.77
VPS13C-203ENST00000395896 IL6STP40189 918 aaPredicted RBP4.01□□□□□ -1.77
VPS13C-203ENST00000395896 SPTY2D1Q68D10 685 aaPredicted RBP4.01□□□□□ -1.77
VPS13C-203ENST00000395896 CEP85Q6P2H3 762 aa4.01□□□□□ -1.77
VPS13C-203ENST00000395896 OSBPL3Q9H4L5 887 aa4.01□□□□□ -1.77
VPS13C-203ENST00000395896 KDM2BQ8NHM5 1336 aa4.01□□□□□ -1.77
VPS13C-203ENST00000395896 RBM25P49756 843 aaKnown RBP4.01□□□□□ -1.77
VPS13C-203ENST00000395896 BCL11BQ9C0K0 894 aaPredicted RBP4.01□□□□□ -1.77
VPS13C-203ENST00000395896 C1orf167Q5SNV9 1468 aa4.01□□□□□ -1.77
VPS13C-203ENST00000395896 TRMT112Q9UI30 125 aaKnown RBP4.01□□□□□ -1.77
VPS13C-203ENST00000395896 LDHCP07864 332 aa4.01□□□□□ -1.77
VPS13C-203ENST00000395896 PHKG2P15735 406 aa4.01□□□□□ -1.77
VPS13C-203ENST00000395896 TCHHQ07283 1943 aa4.01□□□□□ -1.77
VPS13C-203ENST00000395896 IQCA1Q86XH1 822 aa4.01□□□□□ -1.77
VPS13C-203ENST00000395896 ANKRD20A12PQ8NF67 263 aa4.01□□□□□ -1.77
VPS13C-203ENST00000395896 MEIS3Q99687 375 aa4.01□□□□□ -1.77
VPS13C-203ENST00000395896 BTG4Q9NY30 223 aa4.01□□□□□ -1.77
VPS13C-203ENST00000395896 BAG3O95817 575 aa4.01□□□□□ -1.77
VPS13C-203ENST00000395896 AIDAQ96BJ3 306 aa4.01□□□□□ -1.77
VPS13C-203ENST00000395896 FAM208AQ9UK61 1670 aaKnown RBP4.01□□□□□ -1.77
VPS13C-203ENST00000395896 SH3TC1Q8TE82 1336 aa4.01□□□□□ -1.77
VPS13C-203ENST00000395896 METTL24Q5JXM2 366 aa4.01□□□□□ -1.77
VPS13C-203ENST00000395896 NBPF6Q5VWK0 638 aa4.01□□□□□ -1.77
VPS13C-203ENST00000395896 NBPF4Q96M43 638 aa4.01□□□□□ -1.77
VPS13C-203ENST00000395896 PIP4K2AP48426 406 aaPredicted RBP4.01□□□□□ -1.77
VPS13C-203ENST00000395896 CCDC178Q5BJE1 867 aa4.01□□□□□ -1.77
VPS13C-203ENST00000395896 ATL3Q6DD88 541 aa4.01□□□□□ -1.77
VPS13C-203ENST00000395896 SSH3Q8TE77 659 aa4.01□□□□□ -1.77
VPS13C-203ENST00000395896 SLC5A1P13866 664 aa4.01□□□□□ -1.77
VPS13C-203ENST00000395896 PRKCSHP14314 528 aaPredicted RBP4.01□□□□□ -1.77
VPS13C-203ENST00000395896 CLEC4GQ6UXB4 293 aa4.01□□□□□ -1.77
VPS13C-203ENST00000395896 LTN1O94822 1766 aa4.01□□□□□ -1.77
VPS13C-203ENST00000395896 MRE11P49959 708 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms