RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 UBR2Q8IWV8 1755 aa18.96■□□□□ 0.63
VCPKMT-201ENST00000395859 SLC39A6Q13433 755 aa18.95■□□□□ 0.62
VCPKMT-201ENST00000395859 GPR101Q96P66 508 aaPredicted RBP18.95■□□□□ 0.62
VCPKMT-201ENST00000395859 ABT1Q9ULW3 272 aaKnown RBP18.95■□□□□ 0.62
VCPKMT-201ENST00000395859 CASP8AP2Q9UKL3 1982 aa18.94■□□□□ 0.62
VCPKMT-201ENST00000395859 FZD9O00144 591 aa18.94■□□□□ 0.62
VCPKMT-201ENST00000395859 TSKSQ9UJT2 592 aa18.94■□□□□ 0.62
VCPKMT-201ENST00000395859 CLEC11AQ9Y240 323 aa18.94■□□□□ 0.62
VCPKMT-201ENST00000395859 RNF123Q5XPI4 1314 aa18.94■□□□□ 0.62
VCPKMT-201ENST00000395859 ECE1P42892 770 aa18.93■□□□□ 0.62
VCPKMT-201ENST00000395859 FMR1Q06787 632 aaKnown RBP eCLIP18.93■□□□□ 0.62
VCPKMT-201ENST00000395859 CYP4F22Q6NT55 531 aa18.93■□□□□ 0.62
VCPKMT-201ENST00000395859 LGR6Q9HBX8 967 aa18.93■□□□□ 0.62
VCPKMT-201ENST00000395859 CST9Q5W186 159 aa18.92■□□□□ 0.62
VCPKMT-201ENST00000395859 MASTLQ96GX5 879 aa18.92■□□□□ 0.62
VCPKMT-201ENST00000395859 SNED1Q8TER0 1413 aa18.91■□□□□ 0.62
VCPKMT-201ENST00000395859 TRPM7Q96QT4 1865 aa18.91■□□□□ 0.62
VCPKMT-201ENST00000395859 CANXP27824 592 aaKnown RBP18.91■□□□□ 0.62
VCPKMT-201ENST00000395859 MAP2K2P36507 400 aa18.91■□□□□ 0.62
VCPKMT-201ENST00000395859 FKBP4Q02790 459 aaKnown RBP eCLIP18.91■□□□□ 0.62
VCPKMT-201ENST00000395859 AKAP4Q5JQC9 854 aa18.91■□□□□ 0.62
VCPKMT-201ENST00000395859 BEGAINQ9BUH8 593 aa18.91■□□□□ 0.62
VCPKMT-201ENST00000395859 A0A087WZG4 1122 aa18.9■□□□□ 0.62
VCPKMT-201ENST00000395859 CCDC93Q567U6 631 aa18.9■□□□□ 0.62
VCPKMT-201ENST00000395859 GPC2Q8N158 579 aa18.9■□□□□ 0.62
VCPKMT-201ENST00000395859 ZNF277Q9NRM2 450 aaPredicted RBP18.9■□□□□ 0.62
VCPKMT-201ENST00000395859 TLL2Q9Y6L7 1015 aa18.9■□□□□ 0.62
VCPKMT-201ENST00000395859 KLRG2A4D1S0 409 aaPredicted RBP18.89■□□□□ 0.61
VCPKMT-201ENST00000395859 CA12O43570 354 aa18.89■□□□□ 0.61
VCPKMT-201ENST00000395859 TNNT2P45379 298 aaPredicted RBP18.89■□□□□ 0.61
VCPKMT-201ENST00000395859 RNMTO43148 476 aaKnown RBP18.88■□□□□ 0.61
VCPKMT-201ENST00000395859 AOC2O75106 756 aa18.88■□□□□ 0.61
VCPKMT-201ENST00000395859 CNBD1Q8NA66 436 aa18.88■□□□□ 0.61
VCPKMT-201ENST00000395859 COL4A5P29400 1685 aa18.87■□□□□ 0.61
VCPKMT-201ENST00000395859 SULT6B1Q6IMI4 303 aa18.87■□□□□ 0.61
VCPKMT-201ENST00000395859 CAMTA2O94983 1202 aa18.86■□□□□ 0.61
VCPKMT-201ENST00000395859 OLFM4Q6UX06 510 aa18.86■□□□□ 0.61
VCPKMT-201ENST00000395859 CFAP44Q96MT7 982 aa18.86■□□□□ 0.61
VCPKMT-201ENST00000395859 BCORQ6W2J9 1755 aa18.86■□□□□ 0.61
VCPKMT-201ENST00000395859 DGKZQ13574 1117 aa18.85■□□□□ 0.61
VCPKMT-201ENST00000395859 TBC1D2BQ9UPU7 963 aa18.85■□□□□ 0.61
VCPKMT-201ENST00000395859 TRAF5O00463 557 aa18.84■□□□□ 0.61
VCPKMT-201ENST00000395859 STARD3NLO95772 234 aa18.84■□□□□ 0.61
VCPKMT-201ENST00000395859 IL13P35225 146 aa18.84■□□□□ 0.61
VCPKMT-201ENST00000395859 IL6STP40189 918 aaPredicted RBP18.84■□□□□ 0.61
VCPKMT-201ENST00000395859 IARSP41252 1262 aaKnown RBP18.84■□□□□ 0.61
VCPKMT-201ENST00000395859 SCNN1DP51172 638 aa18.84■□□□□ 0.61
VCPKMT-201ENST00000395859 BRPF1P55201 1214 aaPredicted RBP18.84■□□□□ 0.61
VCPKMT-201ENST00000395859 PRPF38BQ5VTL8 546 aaKnown RBP18.84■□□□□ 0.61
VCPKMT-201ENST00000395859 SAPCD2Q86UD0 394 aa18.84■□□□□ 0.61
VCPKMT-201ENST00000395859 SETDB2Q96T68 719 aa18.84■□□□□ 0.61
VCPKMT-201ENST00000395859 NPR1P16066 1061 aa18.83■□□□□ 0.6
VCPKMT-201ENST00000395859 ST5P78524 1137 aa18.83■□□□□ 0.6
VCPKMT-201ENST00000395859 RTKN2Q8IZC4 609 aa18.83■□□□□ 0.6
VCPKMT-201ENST00000395859 HHIPL1Q96JK4 782 aa18.83■□□□□ 0.6
VCPKMT-201ENST00000395859 PAXIP1Q6ZW49 1069 aaPredicted RBP18.82■□□□□ 0.6
VCPKMT-201ENST00000395859 EPS15P42566 896 aa18.81■□□□□ 0.6
VCPKMT-201ENST00000395859 GRM1Q13255 1194 aa18.81■□□□□ 0.6
VCPKMT-201ENST00000395859 SYNE4Q8N205 404 aa18.81■□□□□ 0.6
VCPKMT-201ENST00000395859 PSMD1Q99460 953 aa18.8■□□□□ 0.6
VCPKMT-201ENST00000395859 HEG1Q9ULI3 1381 aa18.8■□□□□ 0.6
VCPKMT-201ENST00000395859 USP50Q70EL3 339 aaPredicted RBP18.79■□□□□ 0.6
VCPKMT-201ENST00000395859 ZNF496Q96IT1 587 aaPredicted RBP18.79■□□□□ 0.6
VCPKMT-201ENST00000395859 MKI67P46013 3256 aaKnown RBP18.77■□□□□ 0.6
VCPKMT-201ENST00000395859 SOX10P56693 466 aa18.77■□□□□ 0.6
VCPKMT-201ENST00000395859 CIAPIN1Q6FI81 312 aa18.77■□□□□ 0.6
VCPKMT-201ENST00000395859 ZIC5Q96T25 663 aa18.77■□□□□ 0.6
VCPKMT-201ENST00000395859 MTHFSDQ2M296 383 aaKnown RBP18.76■□□□□ 0.59
VCPKMT-201ENST00000395859 TEX13AQ9BXU3 409 aaPredicted RBP18.76■□□□□ 0.59
VCPKMT-201ENST00000395859 SIPA1L3O60292 1781 aaPredicted RBP18.76■□□□□ 0.59
VCPKMT-201ENST00000395859 A1BGP04217 495 aa18.75■□□□□ 0.59
VCPKMT-201ENST00000395859 CLEC4GQ6UXB4 293 aa18.75■□□□□ 0.59
VCPKMT-201ENST00000395859 JDP2Q8WYK2 163 aa18.75■□□□□ 0.59
VCPKMT-201ENST00000395859 PGAP2Q9UHJ9 254 aa18.75■□□□□ 0.59
VCPKMT-201ENST00000395859 LMOD1P29536 600 aaPredicted RBP18.74■□□□□ 0.59
VCPKMT-201ENST00000395859 EIF6P56537 245 aaKnown RBP18.74■□□□□ 0.59
VCPKMT-201ENST00000395859 ZNF790Q6PG37 636 aa18.74■□□□□ 0.59
VCPKMT-201ENST00000395859 NBPF5PQ86XG9 351 aaPredicted RBP18.74■□□□□ 0.59
VCPKMT-201ENST00000395859 GJA3Q9Y6H8 435 aa18.74■□□□□ 0.59
VCPKMT-201ENST00000395859 NPHP1O15259 732 aa18.73■□□□□ 0.59
VCPKMT-201ENST00000395859 CELF2O95319 508 aaKnown RBP18.73■□□□□ 0.59
VCPKMT-201ENST00000395859 ZNF330Q9Y3S2 320 aaPredicted RBP18.73■□□□□ 0.59
VCPKMT-201ENST00000395859 ALDH1B1P30837 517 aa18.72■□□□□ 0.59
VCPKMT-201ENST00000395859 DZIP3Q86Y13 1208 aaKnown RBP18.72■□□□□ 0.59
VCPKMT-201ENST00000395859 TTC5Q8N0Z6 440 aa18.72■□□□□ 0.59
VCPKMT-201ENST00000395859 RGL2O15211 777 aa18.71■□□□□ 0.59
VCPKMT-201ENST00000395859 CRY2Q49AN0 593 aa18.71■□□□□ 0.59
VCPKMT-201ENST00000395859 NOGQ13253 232 aa18.7■□□□□ 0.58
VCPKMT-201ENST00000395859 GLIS2Q9BZE0 524 aaPredicted RBP18.7■□□□□ 0.58
VCPKMT-201ENST00000395859 ADARB2Q9NS39 739 aaKnown RBP18.7■□□□□ 0.58
VCPKMT-201ENST00000395859 GPRC5DQ9NZD1 345 aa18.7■□□□□ 0.58
VCPKMT-201ENST00000395859 CC2D2BQ6DHV5 1058 aa18.69■□□□□ 0.58
VCPKMT-201ENST00000395859 TPTE2Q6XPS3 522 aa18.69■□□□□ 0.58
VCPKMT-201ENST00000395859 IL17REQ8NFR9 667 aa18.69■□□□□ 0.58
VCPKMT-201ENST00000395859 SAGE1Q9NXZ1 904 aa18.69■□□□□ 0.58
VCPKMT-201ENST00000395859 FAM155AB1AL88 458 aaPredicted RBP18.68■□□□□ 0.58
VCPKMT-201ENST00000395859 SLC51AQ86UW1 340 aa18.68■□□□□ 0.58
VCPKMT-201ENST00000395859 HMOX1P09601 288 aa18.67■□□□□ 0.58
VCPKMT-201ENST00000395859 FMNL2Q96PY5 1086 aa18.66■□□□□ 0.58
VCPKMT-201ENST00000395859 PANK3Q9H999 370 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms