RNA–Protein interactions for RNA: ENST00000395840.6

RAE1-202, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAE1, Length 2,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-202ENST00000395840 CIZ1Q9ULV3 898 aaPredicted RBP11.06□□□□□ -0.64
RAE1-202ENST00000395840 CEMIPQ8WUJ3 1361 aa11.06□□□□□ -0.64
RAE1-202ENST00000395840 BTAF1O14981 1849 aa11.06□□□□□ -0.64
RAE1-202ENST00000395840 ITGB4P16144 1822 aa11.06□□□□□ -0.64
RAE1-202ENST00000395840 KCNJ4P48050 445 aa11.05□□□□□ -0.64
RAE1-202ENST00000395840 IRX3P78415 501 aaPredicted RBP11.05□□□□□ -0.64
RAE1-202ENST00000395840 TOGARAM1Q9Y4F4 1720 aa11.05□□□□□ -0.64
RAE1-202ENST00000395840 KCNQ2O43526 872 aa11.05□□□□□ -0.64
RAE1-202ENST00000395840 SMC5Q8IY18 1101 aa11.05□□□□□ -0.64
RAE1-202ENST00000395840 CCDC39Q9UFE4 941 aa11.05□□□□□ -0.64
RAE1-202ENST00000395840 PDZRN3Q9UPQ7 1066 aa11.05□□□□□ -0.64
RAE1-202ENST00000395840 COG6Q9Y2V7 657 aa11.05□□□□□ -0.64
RAE1-202ENST00000395840 GOLGA6L22H0YM25 854 aa11.05□□□□□ -0.64
RAE1-202ENST00000395840 ZNF445P59923 1031 aa11.05□□□□□ -0.64
RAE1-202ENST00000395840 PIGBQ92521 554 aa11.05□□□□□ -0.64
RAE1-202ENST00000395840 CCDC27Q2M243 656 aa11.04□□□□□ -0.64
RAE1-202ENST00000395840 CCDC146Q8IYE0 955 aa11.04□□□□□ -0.64
RAE1-202ENST00000395840 NFATC2IPQ8NCF5 419 aa11.04□□□□□ -0.64
RAE1-202ENST00000395840 CHRM1P11229 460 aaPredicted RBP11.04□□□□□ -0.64
RAE1-202ENST00000395840 SLFN5Q08AF3 891 aa11.04□□□□□ -0.64
RAE1-202ENST00000395840 IL17REQ8NFR9 667 aa11.04□□□□□ -0.64
RAE1-202ENST00000395840 PANK1Q8TE04 598 aa11.04□□□□□ -0.64
RAE1-202ENST00000395840 PRIMPOLQ96LW4 560 aa11.04□□□□□ -0.64
RAE1-202ENST00000395840 CAMKK2Q96RR4 588 aa11.04□□□□□ -0.64
RAE1-202ENST00000395840 LGR6Q9HBX8 967 aa11.04□□□□□ -0.64
RAE1-202ENST00000395840 FOXD4L1Q9NU39 408 aa11.04□□□□□ -0.64
RAE1-202ENST00000395840 GTF2F1P35269 517 aaKnown RBP eCLIP11.03□□□□□ -0.64
RAE1-202ENST00000395840 KIAA2012Q0VF49 1180 aa11.03□□□□□ -0.64
RAE1-202ENST00000395840 TAF7Q15545 349 aaPredicted RBP11.03□□□□□ -0.64
RAE1-202ENST00000395840 CERS3Q8IU89 383 aa11.03□□□□□ -0.64
RAE1-202ENST00000395840 PDCL2Q8N4E4 241 aa11.03□□□□□ -0.64
RAE1-202ENST00000395840 ZNF521Q96K83 1311 aa11.03□□□□□ -0.64
RAE1-202ENST00000395840 U2AF2P26368 475 aaKnown RBP eCLIP11.03□□□□□ -0.642e-6■■□□□ 13.9
RAE1-202ENST00000395840 RBM25P49756 843 aaKnown RBP11.03□□□□□ -0.64
RAE1-202ENST00000395840 ZSCAN23Q3MJ62 389 aa11.03□□□□□ -0.64
RAE1-202ENST00000395840 NBPF14Q5TI25 921 aa11.03□□□□□ -0.64
RAE1-202ENST00000395840 CAVIN1Q6NZI2 390 aaKnown RBP11.03□□□□□ -0.64
RAE1-202ENST00000395840 TTC5Q8N0Z6 440 aa11.03□□□□□ -0.64
RAE1-202ENST00000395840 KIF3AQ9Y496 699 aa11.03□□□□□ -0.64
RAE1-202ENST00000395840 ZNF831Q5JPB2 1677 aa11.03□□□□□ -0.64
RAE1-202ENST00000395840 KAT6BQ8WYB5 2073 aa11.02□□□□□ -0.65
RAE1-202ENST00000395840 PALLDQ8WX93 1383 aa11.02□□□□□ -0.65
RAE1-202ENST00000395840 APAF1O14727 1248 aa11.02□□□□□ -0.65
RAE1-202ENST00000395840 SSFA2P28290 1259 aa11.02□□□□□ -0.65
RAE1-202ENST00000395840 HMGN5P82970 282 aaKnown RBP11.02□□□□□ -0.65
RAE1-202ENST00000395840 EN1Q05925 392 aaPredicted RBP11.02□□□□□ -0.65
RAE1-202ENST00000395840 RGS22Q8NE09 1264 aa11.02□□□□□ -0.65
RAE1-202ENST00000395840 DNAJC2Q99543 621 aaKnown RBP11.02□□□□□ -0.65
RAE1-202ENST00000395840 DLG5Q8TDM6 1919 aa11.02□□□□□ -0.65
RAE1-202ENST00000395840 TXNRD1Q16881 649 aa11.02□□□□□ -0.65
RAE1-202ENST00000395840 BCL2L12Q9HB09 334 aa11.02□□□□□ -0.65
RAE1-202ENST00000395840 LY75O60449 1722 aa11.01□□□□□ -0.65
RAE1-202ENST00000395840 EP400Q96L91 3159 aa11.01□□□□□ -0.65
RAE1-202ENST00000395840 BTBD11A6QL63 1104 aa11.01□□□□□ -0.65
RAE1-202ENST00000395840 PDE3AQ14432 1141 aa11.01□□□□□ -0.65
RAE1-202ENST00000395840 TEX13AQ9BXU3 409 aaPredicted RBP11.01□□□□□ -0.65
RAE1-202ENST00000395840 ATG3Q9NT62 314 aa11.01□□□□□ -0.65
RAE1-202ENST00000395840 RREB1Q92766 1687 aa11.01□□□□□ -0.65
RAE1-202ENST00000395840 SLC20A2Q08357 652 aa11.01□□□□□ -0.65
RAE1-202ENST00000395840 MCM10Q7L590 875 aa11.01□□□□□ -0.65
RAE1-202ENST00000395840 SNX21Q969T3 373 aa11.01□□□□□ -0.65
RAE1-202ENST00000395840 SPINK5Q9NQ38 1064 aaPredicted RBP11.01□□□□□ -0.65
RAE1-202ENST00000395840 SIPA1L3O60292 1781 aaPredicted RBP11□□□□□ -0.65
RAE1-202ENST00000395840 PAPPAQ13219 1627 aa11□□□□□ -0.65
RAE1-202ENST00000395840 EZH2Q15910 746 aaKnown RBP11□□□□□ -0.65
RAE1-202ENST00000395840 CCNL1Q9UK58 526 aaPredicted RBP11□□□□□ -0.65
RAE1-202ENST00000395840 PCDHB15Q9Y5E8 787 aa11□□□□□ -0.65
RAE1-202ENST00000395840 BAG4O95429 457 aaKnown RBP11□□□□□ -0.65
RAE1-202ENST00000395840 NEUROD2Q15784 382 aa11□□□□□ -0.65
RAE1-202ENST00000395840 DEFB132Q7Z7B7 95 aa11□□□□□ -0.65
RAE1-202ENST00000395840 AK9Q5TCS8 1911 aa11□□□□□ -0.65
RAE1-202ENST00000395840 IL16Q14005 1332 aa10.99□□□□□ -0.65
RAE1-202ENST00000395840 LOC102724428A0A0B4J2F2 783 aa10.99□□□□□ -0.65
RAE1-202ENST00000395840 PTMAP06454 111 aaKnown RBP10.99□□□□□ -0.65
RAE1-202ENST00000395840 SIK1P57059 783 aa10.99□□□□□ -0.65
RAE1-202ENST00000395840 ZNF790Q6PG37 636 aa10.99□□□□□ -0.65
RAE1-202ENST00000395840 PTF1AQ7RTS3 328 aa10.99□□□□□ -0.65
RAE1-202ENST00000395840 TRMT2AQ8IZ69 625 aaKnown RBP10.99□□□□□ -0.65
RAE1-202ENST00000395840 FMNL2Q96PY5 1086 aa10.99□□□□□ -0.65
RAE1-202ENST00000395840 ASAP1Q9ULH1 1129 aa10.99□□□□□ -0.65
RAE1-202ENST00000395840 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.99□□□□□ -0.65
RAE1-202ENST00000395840 BRD2P25440 801 aaKnown RBP10.99□□□□□ -0.65
RAE1-202ENST00000395840 WDR63Q8IWG1 891 aa10.99□□□□□ -0.65
RAE1-202ENST00000395840 TRIM35Q9UPQ4 493 aa10.99□□□□□ -0.65
RAE1-202ENST00000395840 CICQ96RK0 1608 aaPredicted RBP10.98□□□□□ -0.65
RAE1-202ENST00000395840 GNAI1P63096 354 aa10.98□□□□□ -0.65
RAE1-202ENST00000395840 RRP7AQ9Y3A4 280 aaKnown RBP10.98□□□□□ -0.65
RAE1-202ENST00000395840 ATP6V1AP38606 617 aa10.98□□□□□ -0.65
RAE1-202ENST00000395840 DHX37Q8IY37 1157 aaKnown RBP10.98□□□□□ -0.65
RAE1-202ENST00000395840 IFT57Q9NWB7 429 aa10.98□□□□□ -0.65
RAE1-202ENST00000395840 STK32BQ9NY57 414 aa10.98□□□□□ -0.65
RAE1-202ENST00000395840 DCTN1Q14203 1278 aa10.97□□□□□ -0.65
RAE1-202ENST00000395840 MCTP1Q6DN14 999 aa10.97□□□□□ -0.65
RAE1-202ENST00000395840 FLAD1Q8NFF5 587 aa10.97□□□□□ -0.65
RAE1-202ENST00000395840 CFAP44Q96MT7 982 aa10.97□□□□□ -0.65
RAE1-202ENST00000395840 RBM42Q9BTD8 480 aaKnown RBP10.97□□□□□ -0.65
RAE1-202ENST00000395840 RC3H1Q5TC82 1133 aaKnown RBP10.97□□□□□ -0.65
RAE1-202ENST00000395840 UBR2Q8IWV8 1755 aa10.97□□□□□ -0.65
RAE1-202ENST00000395840 NUP188Q5SRE5 1749 aa10.96□□□□□ -0.65
RAE1-202ENST00000395840 CCDC66A2RUB6 948 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms