RNA–Protein interactions for RNA: ENST00000395751.8

SREBF1-203, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 4,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-203ENST00000395751 FAM76AQ8TAV0 307 aa19.63■□□□□ 0.73
SREBF1-203ENST00000395751 CCDC114Q96M63 670 aa19.63■□□□□ 0.73
SREBF1-203ENST00000395751 ZNF215Q9UL58 517 aaPredicted RBP19.63■□□□□ 0.73
SREBF1-203ENST00000395751 MLECQ14165 292 aa19.62■□□□□ 0.73
SREBF1-203ENST00000395751 EHBP1Q8NDI1 1231 aa19.62■□□□□ 0.73
SREBF1-203ENST00000395751 NEK11Q8NG66 645 aa19.62■□□□□ 0.73
SREBF1-203ENST00000395751 DISP3Q9P2K9 1392 aa19.62■□□□□ 0.73
SREBF1-203ENST00000395751 HMGB1P09429 215 aaKnown RBP19.62■□□□□ 0.73
SREBF1-203ENST00000395751 TOP2BQ02880 1626 aa19.62■□□□□ 0.73
SREBF1-203ENST00000395751 ATP2C2O75185 946 aa19.61■□□□□ 0.73
SREBF1-203ENST00000395751 SMC1AQ14683 1233 aaKnown RBP19.61■□□□□ 0.73
SREBF1-203ENST00000395751 MAATS1Q7Z4T9 603 aa19.61■□□□□ 0.73
SREBF1-203ENST00000395751 NECAB1Q8N987 351 aa19.61■□□□□ 0.73
SREBF1-203ENST00000395751 CARD6Q9BX69 1037 aa19.61■□□□□ 0.73
SREBF1-203ENST00000395751 SEPT7Q16181 437 aaKnown RBP19.61■□□□□ 0.73
SREBF1-203ENST00000395751 B4GALNT4Q76KP1 1039 aa19.61■□□□□ 0.73
SREBF1-203ENST00000395751 HLTFQ14527 1009 aaKnown RBP eCLIP19.61■□□□□ 0.73
SREBF1-203ENST00000395751 GIGYF2Q6Y7W6 1299 aaKnown RBP19.61■□□□□ 0.73
SREBF1-203ENST00000395751 AFAP1L1Q8TED9 768 aa19.61■□□□□ 0.73
SREBF1-203ENST00000395751 TTC5Q8N0Z6 440 aa19.6■□□□□ 0.73
SREBF1-203ENST00000395751 LMOD1P29536 600 aaPredicted RBP19.6■□□□□ 0.73
SREBF1-203ENST00000395751 ISM2Q6H9L7 571 aa19.6■□□□□ 0.73
SREBF1-203ENST00000395751 IFNKQ9P0W0 207 aa19.6■□□□□ 0.73
SREBF1-203ENST00000395751 PUF60Q9UHX1 559 aaKnown RBP19.6■□□□□ 0.73
SREBF1-203ENST00000395751 CEP131Q9UPN4 1083 aa19.6■□□□□ 0.73
SREBF1-203ENST00000395751 MSL1Q68DK7 614 aa19.6■□□□□ 0.73
SREBF1-203ENST00000395751 ANKRD44Q8N8A2 993 aa19.6■□□□□ 0.73
SREBF1-203ENST00000395751 MRPS27Q92552 414 aaKnown RBP19.6■□□□□ 0.73
SREBF1-203ENST00000395751 JADE2Q9NQC1 790 aa19.6■□□□□ 0.73
SREBF1-203ENST00000395751 PLEKHM2Q8IWE5 1019 aa19.59■□□□□ 0.73
SREBF1-203ENST00000395751 SCLT1Q96NL6 688 aa19.59■□□□□ 0.73
SREBF1-203ENST00000395751 CCDC113Q9H0I3 377 aa19.59■□□□□ 0.73
SREBF1-203ENST00000395751 RHOXF2BP0C7M4 288 aa19.59■□□□□ 0.73
SREBF1-203ENST00000395751 TSHZ3Q63HK5 1081 aa19.59■□□□□ 0.73
SREBF1-203ENST00000395751 GOLGA5Q8TBA6 731 aa19.59■□□□□ 0.73
SREBF1-203ENST00000395751 RHOXF2Q9BQY4 288 aa19.59■□□□□ 0.73
SREBF1-203ENST00000395751 TANGO6Q9C0B7 1094 aa19.59■□□□□ 0.73
SREBF1-203ENST00000395751 U3KPZ7 1027 aaPredicted RBP19.59■□□□□ 0.73
SREBF1-203ENST00000395751 CCDC102BQ68D86 513 aa19.58■□□□□ 0.73
SREBF1-203ENST00000395751 SYCP1Q15431 976 aa19.58■□□□□ 0.73
SREBF1-203ENST00000395751 UTP14AQ9BVJ6 771 aaKnown RBP19.58■□□□□ 0.73
SREBF1-203ENST00000395751 SPINK5Q9NQ38 1064 aaPredicted RBP19.58■□□□□ 0.73
SREBF1-203ENST00000395751 WASF1Q92558 559 aa19.58■□□□□ 0.72
SREBF1-203ENST00000395751 ERCC6LQ2NKX8 1250 aa19.58■□□□□ 0.72
SREBF1-203ENST00000395751 DCTPP1Q9H773 170 aa19.58■□□□□ 0.72
SREBF1-203ENST00000395751 AQRO60306 1485 aaKnown RBP eCLIP19.57■□□□□ 0.722e-8■■■■■ 30.9
SREBF1-203ENST00000395751 NCBP3Q53F19 620 aaKnown RBP19.57■□□□□ 0.72
SREBF1-203ENST00000395751 ZSCAN25Q6NSZ9 544 aa19.57■□□□□ 0.72
SREBF1-203ENST00000395751 C16orf71Q8IYS4 520 aaPredicted RBP19.57■□□□□ 0.72
SREBF1-203ENST00000395751 CBX8Q9HC52 389 aa19.57■□□□□ 0.72
SREBF1-203ENST00000395751 PTPRCP08575 1304 aa19.57■□□□□ 0.72
SREBF1-203ENST00000395751 GADD45BO75293 160 aaPredicted RBP19.57■□□□□ 0.72
SREBF1-203ENST00000395751 ALS2CR12Q96Q35 445 aa19.57■□□□□ 0.72
SREBF1-203ENST00000395751 PCF11O94913 1555 aaKnown RBP19.57■□□□□ 0.72
SREBF1-203ENST00000395751 ZEB2O60315 1214 aa19.57■□□□□ 0.72
SREBF1-203ENST00000395751 CLNS1AP54105 237 aaKnown RBP19.57■□□□□ 0.72
SREBF1-203ENST00000395751 ZBTB9Q96C00 473 aa19.57■□□□□ 0.72
SREBF1-203ENST00000395751 INSRP06213 1382 aa19.56■□□□□ 0.72
SREBF1-203ENST00000395751 ARFGAP2Q8N6H7 521 aa19.56■□□□□ 0.72
SREBF1-203ENST00000395751 HYPKQ9NX55 129 aa19.56■□□□□ 0.72
SREBF1-203ENST00000395751 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.56■□□□□ 0.723e-7■■□□□ 13.8
SREBF1-203ENST00000395751 CCDC141Q6ZP82 1450 aa19.56■□□□□ 0.72
SREBF1-203ENST00000395751 BRD1O95696 1058 aa19.56■□□□□ 0.72
SREBF1-203ENST00000395751 GAPVD1Q14C86 1478 aa19.56■□□□□ 0.72
SREBF1-203ENST00000395751 TERF2Q15554 542 aa19.56■□□□□ 0.72
SREBF1-203ENST00000395751 GPT2Q8TD30 523 aa19.56■□□□□ 0.72
SREBF1-203ENST00000395751 TBC1D2BQ9UPU7 963 aa19.56■□□□□ 0.72
SREBF1-203ENST00000395751 A6NNZ2 444 aa19.55■□□□□ 0.72
SREBF1-203ENST00000395751 MATR3P43243 847 aaKnown RBP eCLIP19.55■□□□□ 0.72
SREBF1-203ENST00000395751 TUBB8Q3ZCM7 444 aa19.55■□□□□ 0.72
SREBF1-203ENST00000395751 FMNL3Q8IVF7 1028 aa19.55■□□□□ 0.72
SREBF1-203ENST00000395751 ELP1O95163 1332 aa19.55■□□□□ 0.72
SREBF1-203ENST00000395751 RALGAPBQ86X10 1494 aa19.55■□□□□ 0.72
SREBF1-203ENST00000395751 NDUFAB1O14561 156 aa19.55■□□□□ 0.72
SREBF1-203ENST00000395751 USP16Q9Y5T5 823 aa19.55■□□□□ 0.72
SREBF1-203ENST00000395751 KARSQ15046 597 aaKnown RBP19.55■□□□□ 0.72
SREBF1-203ENST00000395751 MPHOSPH8Q99549 860 aa19.55■□□□□ 0.72
SREBF1-203ENST00000395751 PER1O15534 1290 aaPredicted RBP19.54■□□□□ 0.72
SREBF1-203ENST00000395751 AK2P54819 239 aa19.54■□□□□ 0.72
SREBF1-203ENST00000395751 KCNG4Q8TDN1 519 aa19.54■□□□□ 0.72
SREBF1-203ENST00000395751 ANKRD36BQ8N2N9 1353 aa19.54■□□□□ 0.72
SREBF1-203ENST00000395751 RAD54L2Q9Y4B4 1467 aa19.54■□□□□ 0.72
SREBF1-203ENST00000395751 SYKP43405 635 aa19.54■□□□□ 0.72
SREBF1-203ENST00000395751 CDK5RAP3Q96JB5 506 aa19.54■□□□□ 0.72
SREBF1-203ENST00000395751 FANCD2Q9BXW9 1451 aa19.54■□□□□ 0.72
SREBF1-203ENST00000395751 ATAD2Q6PL18 1390 aa19.54■□□□□ 0.72
SREBF1-203ENST00000395751 GCOM1H8Y6P7 765 aaPredicted RBP19.54■□□□□ 0.72
SREBF1-203ENST00000395751 MYZAPP0CAP1 466 aa19.54■□□□□ 0.72
SREBF1-203ENST00000395751 EVI5LQ96CN4 794 aa19.54■□□□□ 0.72
SREBF1-203ENST00000395751 WDHD1O75717 1129 aaPredicted RBP19.54■□□□□ 0.72
SREBF1-203ENST00000395751 ZFYVE27Q5T4F4 411 aa19.54■□□□□ 0.72
SREBF1-203ENST00000395751 KIAA1524Q8TCG1 905 aa19.54■□□□□ 0.72
SREBF1-203ENST00000395751 HMG20BQ9P0W2 317 aa19.54■□□□□ 0.72
SREBF1-203ENST00000395751 CHMP4BP1P59074 171 aa19.53■□□□□ 0.72
SREBF1-203ENST00000395751 CCT2P78371 535 aaKnown RBP19.53■□□□□ 0.72
SREBF1-203ENST00000395751 AMOTL1Q8IY63 956 aa19.53■□□□□ 0.72
SREBF1-203ENST00000395751 ECHDC1Q9NTX5 307 aa19.53■□□□□ 0.72
SREBF1-203ENST00000395751 IMPACTQ9P2X3 320 aa19.53■□□□□ 0.72
SREBF1-203ENST00000395751 F6X3S4 739 aa19.53■□□□□ 0.72
SREBF1-203ENST00000395751 FKBP15Q5T1M5 1219 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms